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LOCUS XM_017160550 4433 bp mRNA linear INV 09-DEC-2024 transcript variant X3, mRNA. ACCESSION XM_017160550 VERSION XM_017160550.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160550.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4433 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4433 /gene="NFAT" /note="NFAT nuclear factor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108070182" CDS 364..4137 /gene="NFAT" /codon_start=1 /product="nuclear factor of activated T-cells 5 isoform X3" /protein_id="XP_017016039.2" /db_xref="GeneID:108070182" /translation="MRFTYNQYKHYESGYRIPSKMHNLSHHNSNNNNNNTNNNNSNNN NGGGHNNNNSHHYAHHNNNNNGGNNNTNFQAYQHHYKSNFGMRMTMSTNSTMSARIHR KGFRIPSKRQPGKGLPGKLHTITRAGPGKIVPGKRIPQRPHPPPCDNSNDSGLGFDQH TELRSSGGGGGGGVADPAVNGGGSGANSAQRSNLLVNSALTNTVAAAAAAAAAAVASN TLQQHQQHHQQQQQQQQQQQQQQQQQQQQQQQQHSPQQHLIRAIPVSRFISARTVTRV ANKRQPTTPLNSIASSNDGQVQLEIVSQPEQQHRARYQTEGSRGAVKDRSGNGFPIVR LAGYDKGAVLQVFIGTDIGRVAPHMFYQACKVAGKNSTQCNEKKVDGTMVIEIDFKPE TDMTVTCDCVGILKERNVDVEHRFPEHLAQKNKKKSTRCRMVFRTQLTRDDGTTETLQ VCSNPIICTQPPGVPEICKKSLNSCPVDGGLELFIIGKNFLKDTHVVFQETYDSVNGD DPATEIAVRQQLIGGTAALWEQSVLPDKEYLHQTHLICTVPPYLHQSILKPVQVQVSI VSSGKKSEPHTFTYTPKGQYTTLAAASTLSNTIHAQDVSGFMDTTAASASSGSSSGGP WSGPAANPGDNVEAKHEIDSGMMPPPITTQIPMGVRRSSLPSVTPMITDQQLVHLSAV ASAEALKTELLDDGNSHSPLTGESTPDSPNAALQYHRFAHRKPSLDTIMYDQSNSLPG FPAVVAPATAAAVAAAVDIDPAAVAVAVELAVKNEIVKHVVQQHQQMQEQMQEQQQQQ QQQQQQQQQQQQQQQPQQQQQQQQQQQVHKFIDELTKSTSVVTSNGTSEPALFTTSAV IDHALTDILQAKVGIAPPNVVLERSLSLSSTNSNSSMSGGSESSPNSSPLTQDIILNS EPAAALAGAAALGGPAPVDVVTGGLSTDIIMNPAVSPSTILCSANGAATAVVPNILAP HQVTMANSILNDIAMQPEPTQQDAAVAALALSNIMMSPPTAVVASGVGVVDTLPPTPA AMQPEVAATATSTAVSNMIIKAAADFITTQEQEQEQHNYHHRVHSHSPQAAVGVSGNP AETASDPLVNLLLNHSSTPETAAAAAAAVAVEAANFQSMGHSHHAMNHSHHGHSHSHP HSHSHGHHHGHHHGHHLPVVPPTPQESLIVALASENALQKSVATAAVTTNGAVMTQQA SAPNTAGSILPAAVGAVAAAAAVAVQPPIPQELTTMSDQDLISYINPSTFDQL" misc_feature 1252..1743 /gene="NFAT" /note="N-terminal sub-domain of the Rel homology domain (RHD) of tonicity-responsive enhancer binding protein (TonEBP); Region: RHD-n_TonEBP; cd07882" /db_xref="CDD:143642" misc_feature order(1291..1293,1300..1302,1306..1323,1579..1581, 1585..1590,1642..1644,1648..1650,1741..1743) /gene="NFAT" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143642" misc_feature 1753..2109 /gene="NFAT" /note="Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor...; Region: IPT; cl15674" /db_xref="CDD:472823" polyA_site 4433 /gene="NFAT" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aactaaaact gcagaaaaca tttaacaaca aacaaaaaag caacaacaaa caaatgtaca 61 aagccaatcc aaaagtaaaa taattaaatt aaacacacaa acatacaaaa aagaaaaaca 121 agaaacaatt aaatgtgcca acaatattta gcaagtaaac aaaaaacaat ataagtcaaa 181 gggaaaacaa gaaaatcgat gcctgtaaac ataattataa aatatactaa aagcacttat 241 cccaaaaaga gaacgagaag ctcgaggaga gagtagaaag agtgaaagaa cactgagcaa 301 aaataaatta attgcgtagc cataggagta aattaatcga aagtccagtg agaatcaatc 361 aaaatgcgct tcacctacaa tcagtataaa cattacgaat ccggttatcg gattccatcg 421 aaaatgcata atctgagcca ccataatagc aacaacaata ataataacac caacaacaac 481 aatagtaata acaataatgg gggtggccac aacaacaaca atagccatca ttatgcccat 541 cacaacaaca acaataacgg cggcaacaac aacacaaatt ttcaagccta tcagcatcat 601 tacaaaagca attttggcat gaggatgacc atgtccacga attccacaat gagtgcgcga 661 atacatcgga agggatttcg cataccatcg aaaagacagc cgggtaaggg attgcccggc 721 aagttgcata ccatcaccag ggcgggtccc ggaaagatag ttcctgggaa gcgaatacca 781 caacgacccc atccgccgcc ctgcgacaac tccaacgaca gtggccttgg cttcgatcag 841 cacacggagc tgaggtcctc gggcggaggc gggggcgggg gcgtggccga tcctgcggtc 901 aatggaggag gcagtggcgc caactccgcc cagcggtcca acttgctggt caatagcgct 961 ctaaccaaca cagtggctgc tgcggcagcc gcggcagctg ctgcagtggc cagcaacacg 1021 ttgcagcaac atcagcagca ccaccagcaa cagcagcagc aacagcagca gcagcaacaa 1081 cagcagcaac agcagcagca acaacaacag cagcaacatt caccgcagca gcatttaata 1141 cgagcgatac ctgtatcaag attcatatcg gccaggactg tcacccgggt ggccaacaag 1201 cggcagccga cgacgccgct gaacagcatc gccagctcca acgacggcca ggtgcagctg 1261 gagatcgtct cgcagccgga gcagcagcac cgggcccgct accagacgga gggcagccgg 1321 ggagccgtca aggatcgcag cggcaacgga ttccccatcg ttcggctcgc cggctacgac 1381 aagggcgccg ttctgcaggt cttcatcggc accgacattg gccgcgtggc accgcacatg 1441 ttctatcagg cctgcaaggt cgccggcaag aactcgacgc agtgcaacga gaagaaggtc 1501 gacggcacca tggtcatcga gatcgatttc aagcccgaaa cggacatgac cgtcacctgc 1561 gattgcgttg gcatcttgaa ggaacgcaat gtggatgtgg agcaccggtt tccggagcat 1621 ctggcgcaga agaacaagaa gaagtcgacc cgctgccgca tggtgttccg cactcagctg 1681 acccgcgacg atggcaccac cgagaccctg caggtctgct cgaatcccat catctgcact 1741 caaccacctg gcgtaccgga gatatgcaag aaatcattga actcgtgtcc cgttgacggc 1801 ggcctcgagc tattcatcat cggcaagaac ttcctgaagg acacgcacgt ggtgttccag 1861 gagacctacg acagcgtcaa tggcgacgat ccggccaccg agatagcagt gcgccagcag 1921 ctcatcggcg ggaccgccgc cctttgggag cagagcgttc tgccggacaa ggagtatctc 1981 caccagaccc atttgatttg caccgtgccg ccgtatctgc accagagcat cctgaagccc 2041 gtccaggtgc aggtctccat tgtctcgagc ggcaagaaga gcgagccgca cacgttcacc 2101 tacacgccca agggacagta cacgacgctg gcggcggcca gcacgttaag taacacaatc 2161 cacgcccaag atgtgagcgg tttcatggac accaccgcgg cgtccgcttc gagtggctcc 2221 tcctctggtg gcccctggag cggtccagcc gccaatcccg gcgacaatgt ggaggccaag 2281 cacgagatcg actcgggaat gatgccgccg ccgatcacca cccagatacc gatgggcgtg 2341 cgccgctcct cgctgcccag cgtgacgccc atgatcacgg accagcagct ggtccacctg 2401 agtgcggtgg ccagtgcgga ggcgctgaag acggagctcc tggacgacgg caattcgcat 2461 agtcccctga caggggaatc cacgccggat agtccgaatg cagcgctgca gtatcatcgc 2521 tttgcccatc gaaagcccag cctggatacc atcatgtacg atcagtccaa cagcttgccc 2581 ggtttcccgg ccgtcgtggc tcccgcaaca gcagccgctg tggccgccgc cgtggatatc 2641 gatcccgctg ccgtcgccgt ggccgtggaa ctggccgtca agaacgagat tgtcaagcat 2701 gtggtgcagc agcatcagca gatgcaggag caaatgcagg agcagcagca gcagcagcaa 2761 cagcagcaac agcagcagca acagcagcag cagcagcagc aaccccagca gcaacagcaa 2821 cagcagcagc agcaacaggt gcacaaattc atcgatgagc tgaccaaatc cacttcagtg 2881 gtcaccagca atggcaccag tgaaccggcg ctcttcacca cctcggcggt gattgatcac 2941 gccctcaccg atattctgca ggccaaggtg ggcattgcac cgccgaatgt ggtgctcgag 3001 aggagcctat ccctgagctc cacaaactct aacagttcaa tgagcggcgg cagcgagagt 3061 tcgcccaaca gttcgccgct cacccaggat atcatactca attcagagcc cgccgcagct 3121 ctcgccggag cagctgcctt gggcggaccg gcgcccgtgg atgtggtgac cggtggcctg 3181 tccaccgaca tcatcatgaa tcccgccgtc tcgccctcga cgattctgtg ctcggccaat 3241 ggagcagcta ctgcggtggt gcctaatatc ctggctcccc accaggtgac catggccaat 3301 tcgatactga acgacattgc catgcagccg gagcccacgc agcaggatgc agcggtggcc 3361 gccttggcgc tgagcaacat catgatgagt ccaccgacgg cggtggtggc gtcgggcgtc 3421 ggagtggtgg acactttgcc gccgacgccg gcggccatgc agcccgaggt ggcggccaca 3481 gcgacgtcga cggcggtgag caacatgatc atcaaggcgg cggcggactt tataaccacg 3541 caggagcagg aacaggagca gcataactac catcatcgcg tccattcgca ttcgccgcag 3601 gcggccgtcg gcgttagcgg caatccggcg gagacggcct cggatccgct ggtcaatctg 3661 ctgctgaatc actcgagcac accggaaaca gcggccgcag ccgccgcagc ggtggccgtg 3721 gaggcggcca actttcagtc gatgggccac agccaccacg ccatgaatca cagccaccac 3781 gggcatagtc acagtcaccc ccatagtcac agtcatggtc accatcatgg ccaccatcat 3841 ggccaccact tgccggtggt gccgccgaca ccacaagaat ctctgatcgt agcgctggcc 3901 agcgagaatg cgctgcaaaa gtcggtggcc accgccgcgg tgaccaccaa cggggcggtg 3961 atgacgcagc aggcgtcggc accgaacacc gccggcagca tcctgcccgc ggcggtggga 4021 gcggtggctg cggcggccgc cgtggcggta cagccgccca ttccccagga gctgaccacg 4081 atgtcggatc aggatttgat cagctacatc aatccgagca ccttcgatca gctttaaacg 4141 gcttcagatc aacaaattaa actacgtgga cttgtttttt ttttaattaa caataaatgt 4201 cactcctaca caggcttagt cttaagtata tatgtagtat atagacacac acaaacacaa 4261 acacaaacga taaggtttca tgtggaccaa ctttttgacc aagtggatgg tttaaaatcg 4321 ggagaagaaa gcgaaaaaac cactaacaca cacacacaaa cacacattag tagctgtagc 4381 tttgttttta catttaggaa taaaccctac cttatatgga atacctacat tta