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LOCUS XM_017160547 1993 bp mRNA linear INV 09-DEC-2024 (Vap33), transcript variant X1, mRNA. ACCESSION XM_017160547 VERSION XM_017160547.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160547.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1993 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1993 /gene="Vap33" /note="VAMP-associated protein 33kDa; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108070181" CDS 543..1346 /gene="Vap33" /codon_start=1 /product="vesicle-associated membrane protein-associated protein B/C" /protein_id="XP_017016036.1" /db_xref="GeneID:108070181" /translation="MSKPLFDLPLTIDPDNELRFVGPFNRPVVTIMTLRNNSNLPLVF KIKTTAPKRYCVRPNIGKILPFRTTQVEICLQPFIYDQQEKNKHKFMVQSVLAPVDAD LTDLNKLWKELEPEQLMDAKLKCVFEMPSAEANAENTSGGGASGVGSGSAGGGSVGAN TSSASAEALESKPKLSSEDKPSSLPDTAEHVESLAGEIKALRETNSELRKENLHLKDQ ITRYRSSPAIKQVNEPYAPVLAEKQIPVFYIAIAIAAAILSLLLGKFFL" misc_feature 567..887 /gene="Vap33" /note="MSP (Major sperm protein) domain; Region: Motile_Sperm; pfam00635" /db_xref="CDD:459882" polyA_site 1993 /gene="Vap33" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 attattccac tccgcggtta cactttttct gctgacgaat ttctggcttt tttgcatgca 61 ttttgcaagt gaagttttcc aagaaaccga agagtgaaaa ccacgaaagt cgagcgaatc 121 gagaggaaat tcagctggaa ttcggtgaag aaaggcacgt tgatcgtagt tttttttctc 181 gacattttct gcaaagcccg tgcgtgagtg tgactgtgtc cccctctctc tcgctcttcc 241 ttattttttt tgtccatgcg tgtgtgtgtg gtcgcataaa tttaccgata tttcgcctgt 301 gagagcgaaa cgggcgaaaa aaaagagacg agaggcgaac caaacgaaga agaagaagag 361 gcgaaaaaca gcagcagttt cgttgaaata ttgggcaaaa aacgcaaacc caacgagaac 421 aacagaaaag ctgggcgaaa acaggacgca caaaaaagaa ttaaaatcaa aagaagagag 481 gcgcaaagcg gagagagcaa aaagaagcag agacaacaac aacaacaaca aaagccgcca 541 caatgagcaa accactcttt gatcttccgt tgaccattga cccagacaat gagttgcgtt 601 ttgtgggtcc cttcaaccga cccgtcgtca caatcatgac tctgcgcaac aattcaaatc 661 tgcccctggt cttcaagatt aaaacaaccg ccccgaagcg ctactgcgta cgtccaaaca 721 tcggcaagat cctgcccttt cgaacgactc aggtggagat ctgcctgcag ccattcatct 781 atgatcagca ggagaagaac aagcacaagt tcatggtgca gagcgtgctg gcacccgtgg 841 atgctgatct gaccgatttg aataaattgt ggaaggaact ggagccggag cagctgatgg 901 acgccaagct gaagtgcgtg ttcgagatgc ccagcgccga ggcgaatgcg gagaacacta 961 gcggcggcgg agctagcggc gtcggaagcg gaagtgccgg aggcggaagc gtgggcgcca 1021 acactagttc agccagcgcc gaggcgctcg agagcaagcc gaagctctcc agcgaggata 1081 agccctcgag tttgcccgat accgcagagc atgtggagtc gctggccgga gagatcaagg 1141 cgctgcgtga gacaaacagc gaactgcgaa aagaaaatct tcacttgaag gatcaaatca 1201 cacgctaccg cagctcgccg gccatcaagc aggtgaatga gccctatgcc ccagttctgg 1261 ctgagaagca gattccggtc ttttacattg caattgccat tgctgcggcc atcttaagcc 1321 tcctgctggg caaattcttt ctctgaatgc cataaacgaa cgccagcaac atgctatatg 1381 caacgtgcag cagcagcagc agcaacaaca gcaagaaaag cggcaacacc atcaaacagc 1441 aacagcaaca acagcagcag cagcagcaac taacaacagc aaccacaacg aaagaacaac 1501 cagcagcagc agcagaagcg aagcattcaa atccaccatc ggcaaatgaa gcaaaaacca 1561 tagaaaagta aagctgacaa aactaagaaa aaaaaaacaa aaaaatcaga aagaaagaac 1621 agcagagaag ggaaaaccgt aggaggaaag acgtaaaaat cgtattttcg caaaagggga 1681 aatctcacaa gaaatattca acaaaaaaaa aagatgcacg tctacatggt cccatacgta 1741 tattgctcag attttcgatt gcattttgat tcgctactat taatttttaa gcatcttact 1801 ttaaaaagct tcacaactcc tttttttttt attcgttttt gatgcatttg ataaacggac 1861 aaagtgaagt acttcaaaga ataaccaaaa ttatcattaa atagaactta tcataccttt 1921 tcggagagaa tacaaaatat aagaatacaa aattgttact caagtgcgag aataaacttc 1981 agttttaatt aca