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LOCUS XM_017160524 1718 bp mRNA linear INV 09-DEC-2024 protein pretaporter (prtp), mRNA. ACCESSION XM_017160524 VERSION XM_017160524.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160524.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1718 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1718 /gene="prtp" /note="thioredoxin domain-containing protein pretaporter; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108070162" CDS 62..1324 /gene="prtp" /codon_start=1 /product="thioredoxin domain-containing protein 5 homolog" /protein_id="XP_017016013.2" /db_xref="GeneID:108070162" /translation="MLARSFLSVAVCGLLLSPLLPAARAAQEEDSSAGKQAEKQFAVE LDPETFDTAIAGGNVFVKFFAPWCGHCKRLQPLWEQLAEIMNVDEPKVIIAKVDCTKH QTLCAAHQVTGYPTLRLFKQGEEESVKFKGTRDLPAITDFINQELSTPAEADLGEAKR ADVENPNLGKVVDLTEDTFAKHVSSGNHFVKFFAPWCSHCQRLAPTWEELAKELVKEP AVTISKIDCTQFRSICQDFEVKGYPTLLWIEDGKKIEKYSGARDLSTLKSYVEKMVGV PLEKTEGEEAAATKETAGEEEAAAAAAKKLTPQQLTGEAEFDAAIAEGVAFIKFYAPW CGHCQKLQPTWEQLATETHQAQSGVRIAKVDCTAPENKQVCIDQQVEGYPTLFLYKNG QRQNEYEGSRSLPELQAYLKKFLGHDEL" misc_feature 182..490 /gene="prtp" /note="PDIa family, endoplasmic reticulum protein 46 (ERp46) subfamily; ERp46 is an ER-resident protein containing three redox active TRX domains. Yeast complementation studies show that ERp46 can substitute for protein disulfide isomerase (PDI) function in...; Region: PDI_a_ERp46; cd03005" /db_xref="CDD:239303" misc_feature order(263..265,272..274,461..463) /gene="prtp" /note="catalytic residues [active]" /db_xref="CDD:239303" misc_feature 569..871 /gene="prtp" /note="PDIa family, endoplasmic reticulum protein 46 (ERp46) subfamily; ERp46 is an ER-resident protein containing three redox active TRX domains. Yeast complementation studies show that ERp46 can substitute for protein disulfide isomerase (PDI) function in...; Region: PDI_a_ERp46; cd03005" /db_xref="CDD:239303" misc_feature order(650..652,659..661,842..844) /gene="prtp" /note="catalytic residues [active]" /db_xref="CDD:239303" misc_feature 980..1294 /gene="prtp" /note="The thioredoxin (TRX)-like superfamily is a large, diverse group of proteins containing a TRX fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox...; Region: Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; cl00388" /db_xref="CDD:469754" polyA_site 1718 /gene="prtp" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cagtgtagtg cattttattt tagaatacga attttaaatc tctcccagcg tttcgtgcat 61 catgttggcc aggtccttct tatccgtggc cgtgtgcggc ctgctgctat cgcccctcct 121 gcccgccgcc cgtgcggccc aggaggagga ctcctccgcc ggcaaacagg cggaaaagca 181 gttcgccgtg gaactggacc cggaaacctt cgacaccgcg attgccggcg gcaatgtctt 241 cgtcaagttc tttgcgcctt ggtgcggcca ctgcaagcgc ctccagccgc tgtgggagca 301 gctggccgag atcatgaacg tggatgagcc caaggtgatc atcgccaagg tggactgcac 361 caagcaccag acattgtgcg ccgcccacca ggtgaccggc tacccgacgc tgcgcctctt 421 caagcagggc gaggaggagt cggtcaagtt caagggcacc cgcgacctgc ccgccatcac 481 ggacttcatc aaccaggagc tgagcacgcc cgccgaggcg gatctgggcg aggccaagcg 541 cgcggatgtg gagaacccca atctgggcaa ggtggtcgac ctcaccgagg acaccttcgc 601 caagcacgtg tccagtggca atcactttgt caagttcttc gccccctggt gcagtcattg 661 tcagcgcttg gcgcccacct gggaggagct ggccaaggag ctggtgaagg agcccgccgt 721 gaccatctcg aagatcgact gcacccagtt ccgctccatc tgccaggact tcgaggtcaa 781 gggctatccc acgctgctct ggatcgagga tggcaagaag attgagaagt actcgggtgc 841 ccgcgacctg tccacgctga agagctacgt ggagaagatg gtgggcgtgc cgctggagaa 901 gaccgagggc gaggaggcgg ccgccaccaa ggagactgcc ggcgaggagg aggcggcagc 961 ggcggcggcc aagaagctga cgccccagca gctgaccggc gaggccgagt tcgatgcggc 1021 cattgccgag ggcgtggcct tcatcaagtt ctacgccccg tggtgcggac actgccagaa 1081 gctgcagccc acctgggagc agctggccac ggagacgcac caggcgcaga gtggcgtgag 1141 gatcgccaag gtggactgca cggcgccgga gaacaagcag gtgtgcatcg accagcaggt 1201 cgagggctat cctacgctat tcctctacaa gaacgggcag cgccagaacg agtacgaggg 1261 cagtcgctcc ctgccggagc tgcaggccta cctcaagaag ttcctcggcc acgacgagct 1321 ctaagtcgga ggagcagggg atcagcagca gtcgaatgaa caaaaatcgc ccgccaaact 1381 aatcgtaatc gtaatgtttt ctcttcaaaa aacaccggca taaaccgacc tctgtgagga 1441 gtccgcattt aaagaatata tgaacaacac ccaaaagaca aagtgctagc cggagtccat 1501 gagtcgttct tagtgtttcc cccgctgtgt tccccccacc ccctttttta tgtttttagt 1561 atttacggta atggggcacc aggactgtgt gcacgagaaa agccatttag caaacattat 1621 ttccaattct aacatcattt tgtggtcgtt aggctacttt taagtcattc ttaggaaaaa 1681 ttgtcgacac aatacaaata aatatcaatt ggaaaaca