PREDICTED: Drosophila takahashii farnesol dehydrogenase

LOCUS       XM_017160513             884 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108070150), mRNA.
ACCESSION   XM_017160513
VERSION     XM_017160513.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017160513.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..884
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..884
                     /gene="LOC108070150"
                     /note="farnesol dehydrogenase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:108070150"
     CDS             65..820
                     /gene="LOC108070150"
                     /codon_start=1
                     /product="farnesol dehydrogenase"
                     /protein_id="XP_017016002.2"
                     /db_xref="GeneID:108070150"
                     /translation="MDRWLNRVAVVTGASSGIGAACCKDLVAKGLVVVGLARREERLK
                     ELKDSLPADQAARFHGRKCDVSKEQEVIDTFAWIDATLGGADVLVNNAGIVRAGVGIT
                     KEGNGDDLRAILDTNVLGVSWCTREIFKSLQRRNVNDGHVLIVNSVAGHRVPNIPGFT
                     MGMYSPSKHAITALTEVLRQEFQNSKTQTKITSISPGAVDTEIIDKAALVHFPDLPLL
                     RSEDVADAVSYCIQTPPNVQIHELIIKPVGETI"
     misc_feature    65..802
                     /gene="LOC108070150"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; Region:
                     Rossmann-fold NAD(P)(+)-binding proteins; cl21454"
                     /db_xref="CDD:473865"
     misc_feature    order(101..103,107..112,116..118,173..181,335..343,
                     497..505,554..556,566..568,650..661)
                     /gene="LOC108070150"
                     /note="NAD(P) binding site [chemical binding]; other site"
                     /db_xref="CDD:187535"
     misc_feature    order(413..415,503..505,554..556,566..568)
                     /gene="LOC108070150"
                     /note="active site"
                     /db_xref="CDD:187535"
     polyA_site      884
                     /gene="LOC108070150"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gaaagagcag ttctatcata atattccacc ggataaacat cgaaaaatac aaagaaaaac
       61 aaccatggat cgttggctaa atcgcgttgc tgtcgtcacg ggagccagtt cgggaatcgg
      121 agctgcctgc tgcaaggatc tggtggccaa gggcctcgtg gtcgtgggtc tggcccgtcg
      181 cgaggagcgt ctgaaggagc tgaaggactc gctgccggcg gaccaggccg ctcgcttcca
      241 cggccgcaag tgcgacgtga gcaaggagca ggaggtgatc gacaccttcg cctggatcga
      301 cgccactctg ggtggcgccg atgtgctggt gaataacgcc ggaattgtgc gggccggcgt
      361 gggcatcacc aaggagggca atggcgacga tctgcgcgcc attctggata ccaatgtcct
      421 gggagtctcg tggtgcacgc gcgagatctt caagtcgctg cagcgacgca atgtcaacga
      481 cggccatgtg ctgatcgtca acagtgtggc cgggcatcgg gtgcccaaca ttccgggctt
      541 caccatgggc atgtactcgc cctcgaagca cgccatcacc gccttgacgg aggtcctgcg
      601 ccaggagttc cagaacagca agacccagac caagatcacg agcatcagtc ccggtgccgt
      661 ggacaccgag atcatcgaca aggccgccct cgtccacttc cccgacctgc cactgctgcg
      721 ctccgaggac gtcgccgatg ccgtcagcta ctgcatccag accccgccca atgtccagat
      781 ccacgagctg atcatcaagc ccgtgggcga gaccatctag actgtccatg tagctttagg
      841 tactcccctc ccacccgtaa ttatatgcaa gtgatctgtt aaaa