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LOCUS XM_017160494 2101 bp mRNA linear INV 09-DEC-2024 (PhKgamma), transcript variant X4, mRNA. ACCESSION XM_017160494 VERSION XM_017160494.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160494.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2101 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2101 /gene="PhKgamma" /note="phosphorylase kinase gamma; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108070142" CDS 138..1751 /gene="PhKgamma" /codon_start=1 /product="phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform isoform X1" /protein_id="XP_017015983.2" /db_xref="GeneID:108070142" /translation="MAKDEEDDLLPDKDAAKGFYAKYEPKEILGRGISSTVRRCIEKE TGKEFAAKIIDLGATTEAGETNPYHMLEATRQEISILRQVMGHPYIIDLQDVFESDAF VFLVFELCPKGELFDYLTSVVTLSEKKTRTIMRQIFEGVEYIHAKNIVHRDLKPENIL LDENHNVKITDFGFARQLQEGEKLTDLCGTPGYLAPETLKCNMFEGSPGYSQEVDIWA CGVIMFTLLVGCPPFWHRKQMVMLRNIMEGKYSFTSPEWADISEDPKDLIRKCLVVDP AQRITVKEVLRHPFFNQMVLMGDRRHPAHPPTSAAHSSSRFLLGPETSSSYRFGAGYL YCAPQSSYSSNRMRDGPLDDAAASCLAMSSSTSSAAAALASASSHKTLTATVYYQQQP QNQNQQQLQQQQLQLQQQQSQYQQQQTTQLQLPGGDGKQSVYTPPPVQLRKQSRFNAR KKFQFAILVIRAVIRIRRLRFTAEPLHVEEAIRDPYRVKVLRKVIDGCAFRVYGHWVK KGEGQNRAALFENTPRTELHALYINNLSR" misc_feature 192..1010 /gene="PhKgamma" /note="Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma subunit; Region: STKc_PhKG; cd14093" /db_xref="CDD:270995" misc_feature order(222..227,231..236,240..242,246..248,285..287, 291..293,408..410,456..461,465..467,477..479,483..485, 591..596,600..602,606..611,615..617,648..650,657..659, 693..713,717..719) /gene="PhKgamma" /note="active site" /db_xref="CDD:270995" misc_feature order(222..227,231..236,240..242,246..248,285..287, 291..293,408..410,456..461,465..467,477..479,594..596, 600..602,606..611,615..617,648..650) /gene="PhKgamma" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270995" misc_feature order(234..236,477..479,483..485,591..596,600..602, 606..608,657..659,693..713,717..719) /gene="PhKgamma" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270995" misc_feature 645..713 /gene="PhKgamma" /note="activation loop (A-loop); other site" /db_xref="CDD:270995" polyA_site 2101 /gene="PhKgamma" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agagaagaga aaggaaaaga acgaaagtcg caaagtcgga aagtcgcagt ctcagtcgct 61 gagacagaaa cagagattcc actcgtgtcg cacattcccc tgccgattcg gcagccggca 121 agatttcact ggatctaatg gccaaggacg aggaggatga cctgctgccc gacaaggatg 181 cggccaaggg cttctatgcc aagtacgagc ccaaggagat tctgggcagg ggcatcagtt 241 cgaccgtgag gcggtgcatc gagaaggaga cgggcaagga gttcgccgcc aagatcatcg 301 acctgggcgc caccacagag gcgggcgaga cgaatccata tcacatgctg gaggcgacca 361 gacaagaaat ctcaatactg cgccaggtca tggggcatcc gtacataatt gatctgcagg 421 atgtgttcga gtcagatgca tttgttttcc tcgtattcga gctgtgtccc aagggcgagc 481 tcttcgacta tctgacctcc gtggtgacgc tctccgagaa gaagacgcgc accattatgc 541 ggcagatctt cgagggcgtc gagtacatac acgccaagaa cattgtccat cgcgacctca 601 agcccgagaa catcttgctc gacgagaacc acaacgtgaa gatcacggac tttggcttcg 661 ccaggcagct gcaggagggc gagaaactta cagatctgtg cggaacgccg ggttacttgg 721 cgccggaaac gctcaagtgc aacatgttcg aaggatcccc cggctattcg caggaagtgg 781 acatatgggc ctgtggcgtg attatgttca cgctgctcgt cggctgtcca cccttctggc 841 accgcaaaca gatggtcatg ctgcggaata tcatggaggg caagtacagc ttcacctcgc 901 ccgagtgggc tgatatttca gaggatccca aggatctgat acgcaaatgt ctagtcgttg 961 atcctgcgca acgtatcacc gtcaaggaag tattaagaca tccattcttc aaccaaatgg 1021 tgctaatggg tgaccgccgg catccggccc atccgcccac ctcggccgcc cactcgagca 1081 gcaggttcct cctggggccc gaaacctcct cgtcgtaccg ctttggcgcc ggctacctgt 1141 actgtgcgcc gcagagctcc tactcgtcga accgaatgcg cgacgggccg ctggacgatg 1201 cggctgcctc ctgcctagcc atgtcatcat ccacctcctc cgccgccgcc gccctggcat 1261 cagcatcctc ccacaaaacg ctcacggcga cggtctacta tcagcagcag ccgcagaatc 1321 agaatcagca gcagttgcaa cagcagcagt tgcagttgca gcagcagcaa tcgcagtatc 1381 agcagcaaca gacgacgcaa ctgcagttgc caggtggcga tggcaagcaa tcggtgtaca 1441 cacctcctcc agtgcagctg cgcaaacaga gtcgcttcaa cgcgcgcaaa aagttccaat 1501 tcgccatact agtgatacgg gccgtcatcc ggatacggcg cctgcgcttc accgccgagc 1561 cgctgcacgt tgaggaggcc atccgggatc cgtatcgcgt caaggttctg cgcaaggtca 1621 tcgatggctg tgccttccgt gtctacgggc actgggtcaa gaagggcgag ggccagaacc 1681 gggccgccct cttcgagaat actccgcgca ccgagctgca cgcgctctac atcaacaatc 1741 tcagccgata gaaggcggcc gggcaacggg gcgtggtcgc tgagtagcta cacaagcaca 1801 cacaacagaa cacacaagaa aaaagagcaa ggaaagccca ggccaccaac aaacaaacga 1861 attagcaaaa gttactaaga aagttacagg aaactgcaat tgcgattgcg attgcaagag 1921 gagagacacc aaaaaggatt caacctcaac cgttcggctc gttgcggttc caagaactag 1981 aaaacctcac ccgcaggtgt acataaatgc ctagttatat tacctctctg cctttttcgt 2041 ccttgtgatt ttgtttaaag ccttttattt gaatttatat ctatattttt ttccgtatac 2101 g