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LOCUS XM_017160487 4030 bp mRNA linear INV 09-DEC-2024 protein bifocal (bif), transcript variant X2, mRNA. ACCESSION XM_017160487 VERSION XM_017160487.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160487.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4030 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4030 /gene="bif" /note="protein phosphatase 1-binding protein bifocal; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108070138" CDS 321..3698 /gene="bif" /codon_start=1 /product="serine-rich adhesin for platelets isoform X2" /protein_id="XP_017015976.2" /db_xref="GeneID:108070138" /translation="MESQKRPSLHLLTDVPAGSAAGGAGPAGSAAEMSPTSGFLPDMP QWKKDLIQRRKTNVARTQAASIASPTDGSCGALAEATAAPGAIADSTEPATIISTSQK RNMIGSEEKCEKSSISNTNSNSTGGHHSVVAVSLSPEAATTNVTVTPIPKQRSSLLLN TRSQEKEGEREILAESAERERETESEREQPAAVVVVVGSGRCGEVETGTTGAAATSSP SSSSANQNPNPNHLKTKCKPGQSVAEGKPSAKETTISISSESTTKSCSKTKSISDKLQ SNKFIIQQQQQQQQQQQQLSPTKVTVKPTMVAMQEMKKTTKQNGQHRHLTAKIGTASG PGGVDVDSQSPNPIPDSLDTGEDLSYGPGIVSKLRCRYLSLALRESRQQSSKQRLQRS TSLNTLLDRDDDEVDVEVEPEVVASSQVRAKSTPPPILGAKPTGKPNRQDNQQQQQQR PVSLGANGGSAAVNPPLTSEDAQPGQVIANGSANRSRHFKRGNEVMKRARSVEALLCE KSPWNSQRISTAGTPSPTAIKANVAPSPVVTSPTCVTIEDKIHNARERLHSGTDTAPP KRLTSIIDDTERPPPDLVKQTLKMFEASANRRPRAAHRSNGVGGVASKVASYKSIIKD QATPPPSSGFASSTPLRNPHHVHPDIIPRQVDSPVSALSLMMRRMELQDPETPERDTT PQSEAPSETERNDRDEGDVDGEGDGEGDDDSPNNNDDHDDDSSDNNEQCDKMGAAAGG GGDKPKPPAESAAGGAQRSFAASTENAHVASGSSSTSSTTTTVRKLNNNSSSSISDSS GPAVTKQIGVIRPLFNSQGAGSTPLTSREIEKNRINEMKKSTATEAGAGSGSGSATGS SPTASLDTVINTKEAASSETDASASPLWTLRKLRSSQSQGAGGGGGASGGSGPSSSHH STENTSMVFNFSKSTKEVPDYIESDVVIYRRKRELPKPNEPGFVLLGDLSVETSTDTD YDDYSMCPPSPCDVEFENANIVIDGKSSIRQKAKDSSFRVQFNDTLTSTFEYPSEASM TIEDPPYADPFGHVSKHHQMLLAEQMHRLQHQQQLEQLELEQMHQLGLQEQHHHVTVD EIIELPTSTAGHGHGHGYRAGAAGGGPMLGNLPLDII" ORIGIN 1 atcgataggc agtatttgtg tattggaaac gcggcttaac ttgatgcaga tttttccgct 61 gattcggctg caaatgatgc acttttgagg cgcagcgagt gcacccacgc ccccgagttc 121 gagtgcagtt gcagtcggga aagtttggaa agtgcgcgga gcgtggagag cgacgaattc 181 ggccagcgcg tcgagctgaa aggagcggaa aagaaaagtg acgaaaagcg ggggaaaacg 241 gcggatgagc gaaaatcgga aaattgaaaa cgaaaccaac caccgacttg tttaagccca 301 gcatctcaaa aacggggata atggagtcac agaagcggcc gtcgttgcat ttactcacgg 361 atgtgccagc aggatcggca gctggaggag ctggacctgc aggatctgca gctgagatgt 421 cgcccacttc cggcttcctg ccagacatgc cgcagtggaa gaaggacctc atccagcggc 481 ggaaaacgaa cgtggcccgc acccaggcgg cgtccatcgc ctcgcccacc gatggcagtt 541 gtggggcttt ggcggaagcc accgccgctc caggtgcaat tgcagattcc acggaaccgg 601 cgacaatcat tagcactagt caaaagagaa atatgatcgg ttcagaggaa aagtgtgaga 661 aatcttccat ttccaatacc aattccaatt ccactggagg tcatcactct gttgttgccg 721 tctccctttc gcccgaagcg gcaacaacaa atgtaacagt aacaccaata ccaaagcagc 781 gatcgagttt actactcaac acgagaagtc aggagaagga gggagagcgc gagattctag 841 ccgagagtgc ggagagagag agagagacag agagcgaacg cgaacagccg gctgccgtgg 901 tggtggtggt gggtagcggc cggtgtggtg aagttgaaac tggcacaact ggagcagcag 961 caacatcgtc gccgtcgtcg tcgtcagcaa atcaaaatcc aaacccaaat cacttgaaaa 1021 cgaaatgcaa accgggacag agcgttgctg agggcaagcc ttcagcgaaa gagaccacca 1081 tttccatttc cagcgaaagc accaccaaga gctgcagcaa gacgaagagt atttccgata 1141 aattgcagag caacaagttt ataattcagc aacagcagca gcagcagcag caacaacagc 1201 aactgtcgcc cacaaaggta acggtaaaac cgacaatggt cgccatgcaa gagatgaaga 1261 agacaaccaa acaaaatggc cagcaccgcc acctaacggc caaaataggc actgccagcg 1321 ggccaggcgg cgtggatgtg gattcccaat cgccgaatcc cattccagat tccctggaca 1381 ccggcgagga tctgagctac gggcccggca ttgtgtccaa gctgcgctgc cgctacctca 1441 gcctggcgct ccgcgagtct cgccagcaga gtagcaagca acgcctccag cgctccacca 1501 gcctgaatac tctcctggat cgcgacgacg acgaggtgga tgtggaggtg gagcccgagg 1561 tggtggccag tagtcaggtg cgtgccaaat ccacaccgcc accgattctg ggtgccaaac 1621 cgaccggcaa acccaacaga caggacaacc agcagcagca gcagcagcgt ccggtgagcc 1681 tgggcgccaa tggaggatcg gcagctgtta acccgcccct cacctcggag gatgcccagc 1741 caggtcaggt gatagccaac ggatcagcca atcgatcgcg tcactttaag cgcggcaacg 1801 aagtgatgaa gcgggcccgc tccgtggagg ccctcctctg cgagaagtcg ccgtggaaca 1861 gtcagcggat cagcaccgcg ggaacacctt caccaacggc catcaaggcc aacgttgccc 1921 cctcacctgt tgtcacctcg cccacctgcg tcaccatcga ggataagatc cacaatgccc 1981 gcgagcggct gcacagcggc acggatacgg cgccgcccaa gcggctgacc tcgattatcg 2041 acgacaccga acggccgcca ccggatctgg tcaagcagac gctcaagatg ttcgaggcga 2101 gtgccaatcg gcgaccgcgg gccgcccatc gttccaacgg cgtgggcgga gtggccagca 2161 aggtggcgag ctacaaatca atcatcaagg atcaggccac gccgccgccg tcgtcgggct 2221 ttgcctcctc gacgccgctc aggaatccgc atcatgtcca tcccgatata ataccccgcc 2281 aggtcgactc gcccgtttcg gcgttgagtc tgatgatgcg tcgcatggag ctgcaggatc 2341 cggagacgcc cgaaagggat accacaccgc agagcgaggc gccaagcgag actgagcgaa 2401 acgatcgcga tgaaggcgat gtcgatggcg agggcgatgg cgaaggcgat gacgacagcc 2461 ccaacaacaa cgacgatcac gacgacgaca gcagcgacaa caatgagcaa tgcgataaaa 2521 tgggcgcggc ggcaggcggc ggcggcgata agcctaagcc cccagcggaa tcggcagcgg 2581 gaggcgccca gcgatcattc gctgcctcga cggagaacgc gcatgtagcc agcgggagta 2641 gcagtaccag cagtacgaca accacagtgc ggaagctcaa caacaacagc agcagcagca 2701 tcagcgattc cagcggacca gcggtgacca aacagattgg tgtgatccgg ccgctgttca 2761 atagccaggg agctgggagt acgccactga cgagtcgcga gatcgagaag aatcgcatca 2821 atgagatgaa gaagtcgacg gccacagaag ccggtgcggg atcgggatcg ggatccgcaa 2881 cgggatcctc gcccaccgct agtctcgaca ccgtgataaa caccaaggag gcggccagca 2941 gcgaaacgga tgccagcgcc tcgccactgt ggacactgcg caagctgagg agcagccaga 3001 gtcagggagc cggcggcgga ggaggagcca gcgggggatc gggacccagt tccagccatc 3061 attccacgga gaacacctcg atggtgttca acttctccaa gagcaccaag gaagtgcccg 3121 actacatcga aagcgacgtt gtgatttaca ggcgcaagcg ggagctgccc aagccaaatg 3181 agcctggctt cgtgctgctg ggcgatctct ccgtggaaac gtcaacggac acggactatg 3241 acgactactc catgtgcccg ccatcgccgt gcgatgtgga gttcgagaat gccaacattg 3301 tgatcgacgg caagtccagc atacgccaga aagccaaaga ttcttcgttc cgcgtgcagt 3361 tcaacgacac gctgacgtcg acgtttgaat acccctccga ggcatcgatg accatcgagg 3421 atccgccgta cgccgatccg ttcgggcatg tgagcaagca ccaccagatg ctgctggcgg 3481 agcagatgca caggctgcag caccagcagc agctggagca gctggagctg gagcagatgc 3541 accagctggg gctgcaggag cagcaccacc atgtgaccgt cgacgagatc atcgagctgc 3601 ccacgtcgac ggcgggacat ggacatggac atggatacag ggcgggggcg gcggggggcg 3661 gaccgatgct ggggaattta ccgttggata ttatttaaat gtaacagatt acataagcaa 3721 agcgttgaaa taatatctat tgtataccaa aaccaaaaat atctatgata acaagcaaag 3781 gcaaataaac cgaaccgaaa cagaataacc gattaactgc agccgctgaa cccaatgaac 3841 cgcaatattg cgaataacca tcaagaaaac ttaactgaaa aactgattat aaagcaccaa 3901 agccaaaaaa taacccaata accgattaaa gggcgaacac tgcaaaacag ccacacctct 3961 aacccagtgc acttgctctg tctgctccgc tgggcaatca aaactaatcg ccaattcata 4021 ttactcttaa