Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017160473 5090 bp mRNA linear INV 09-DEC-2024 (ATP7), mRNA. ACCESSION XM_017160473 VERSION XM_017160473.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160473.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5090 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5090 /gene="ATP7" /note="copper-transporting ATPase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108070129" CDS 303..4055 /gene="ATP7" /codon_start=1 /product="copper-transporting ATPase 1" /protein_id="XP_017015962.2" /db_xref="GeneID:108070129" /translation="MQRSSEDMSTVRLPIVGMTCQSCVRNIQEQIGQKPGIITVRVVL EEQAGYFDYDPRQTDPSRIASDIDDMGFECSYPTDTQQSSSSSSSAWTNIRVVGMTCQ SCVRNIEGNIGTKPGIHSIEVQLAAKNARVQYDPAQHDPAQIAELIDDMGFEASVQPA DWETTSKSKSPSPAASSPRKRETPPAAQNGSAVAIPIEQELLTKCFLHIRGMTCASCV AAIEKHCKKIYGLDTILVALLAAKAEVKFNANVVTAENIAKSITELGFPTELIDEPDN GEAEVELEIMGMTCASCVNKIESHVLKIKGVTSASVTLLTKRGKFRYITEDTGPRSIC EAIEGLGFEAKLMTGRDKMAHNYLEHKEEIRKWRNAFLVSLIFGGPCMVAMIYFMLEM SDKGHANMCCLVPGLSMENLVMFLLSTPVQFFGGFHFYVQSYRAIKHGTTNMDVLISM VTTISYVYSVAVVIAAVLLEQNSSPLTFFDTPPMLLIFISLGRWLEHIAKGKTSEALS KLLSLKAADALLVEISPDFDIVSEKVISVDYVQRGDILKVIPGAKVPVDGKVLYGHSS CDESLITGESMPVAKRKGSVVIGGSINQNGVLLVEATHTGENTTLAQIVRLVEEAQTS KAPIQQLADRIAGYFVPFVVVVSSITLIAWIIIGFANPNLVPVAMEHKMHMDQNTIIV SYAFKCALSVLAIACPCALGLATPTAVMVATGTGAINGVLVKGATALENAHKVKTVVF DKTGTITHGTPMTSKVTLFVRAQVCSLARALTIVGAAEQNSEHPIASAIVHFAKDMLN VGSSPQGGSFGKSSHFQAVPGCGIRVTVSNYEQTLRQACNAERIINYENLHRNSPLES VPVDNGASIEHLLPQHSVRKSMELNNQQLLSDLVLETEEQLTTDQPLIDGPEILVLIG NREWMQRNGIEVPLEISDCMTHEERKGHTAVLCALNGQLVCMFAVSDMVKPEAHLAVY TLKRMGIDVVLLTGDNKNTAASIAREVGIRTVYAEVLPSHKVAKIQRIQASGIRVAMV GDGVNDSPALAQADVGITIAAGTDVAAEASDIVLMRNDLLDVVACLDLSRCTVRRIRY NFFFASMYNLLGIPLASGLFAPYGFTLLPWMASVAMAASSVSVVCSSLLLKMYRKPTA KTLRTAEYEAQLAAERAGGSEFELDKLSLHRGLDDLPEKGGRLAFKRSSNSLISRIFM QGNGGISSPNAKHEEGLLDPEEQYDGRTKIVRSRYHASDSTELQKL" misc_feature 339..527 /gene="ATP7" /note="Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain...; Region: HMA; cd00371" /db_xref="CDD:238219" misc_feature order(354..362,369..371) /gene="ATP7" /note="metal-binding site [ion binding]" /db_xref="CDD:238219" misc_feature 582..770 /gene="ATP7" /note="Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain...; Region: HMA; cd00371" /db_xref="CDD:238219" misc_feature order(597..605,612..614) /gene="ATP7" /note="metal-binding site [ion binding]" /db_xref="CDD:238219" misc_feature 921..1115 /gene="ATP7" /note="copper chaperone CopZ; Region: chaper_CopZ_Eh; NF033794" /db_xref="CDD:411374" misc_feature 1146..1337 /gene="ATP7" /note="Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain...; Region: HMA; cd00371" /db_xref="CDD:238219" misc_feature order(1164..1172,1179..1181) /gene="ATP7" /note="metal-binding site [ion binding]" /db_xref="CDD:238219" misc_feature 1413..3677 /gene="ATP7" /note="P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B; Region: P-type_ATPase_Cu-like; cd02094" /db_xref="CDD:319783" misc_feature order(2391..2393,2397..2399,3588..3590) /gene="ATP7" /note="putative Cu binding site [ion binding]; other site" /db_xref="CDD:319783" misc_feature order(2523..2531,2751..2753,3039..3047,3135..3137, 3255..3263,3321..3323,3330..3332,3339..3341,3396..3398, 3405..3407) /gene="ATP7" /note="putative ATP binding site [chemical binding]; other site" /db_xref="CDD:319783" polyA_site 5090 /gene="ATP7" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 accgatagct gccagttgcg tgccgtgcga aaacataacg ggagcggagc agctgttgcc 61 tgctaattgg gaaatcaaac acacaaaaac gcaaaattgt gagtttcgtg tggcgattgg 121 gcgagtgaaa agcgctgccc gaagctggag gcgactattc cggcacaaca catccaaatc 181 ggtggcagct gcagttcagt tagtgacaca atacggggac acggcgagcg tgcaacaggg 241 acggcgatag agcgaggggc aactcgagag tttccaaacc taaaaaataa tgcaaattca 301 ggatgcagag gagcagtgag gacatgtcca cggtgcgcct gcccattgtg ggcatgacct 361 gccagtcgtg cgtgcgcaac atccaggagc agattggcca gaaaccggga ataatcacgg 421 ttcgcgttgt cctggaggag caggcgggct actttgacta cgatccgcgg caaacggatc 481 cctcgcggat agccagcgat atcgacgaca tgggcttcga gtgcagctat cctacggata 541 cccagcaatc ctcctcctcc tcctcctccg cctggaccaa catccgggtg gtgggcatga 601 cctgccagtc gtgcgtacgc aacatcgagg gcaacatcgg caccaagccg ggcatccaca 661 gcatcgaggt gcagctggcg gccaagaatg cccgcgtcca gtatgatccc gcccagcatg 721 atcccgccca gatagccgag ctcatcgacg acatgggctt cgaggcgagc gtgcagccag 781 cggattggga aactacctcc aaatccaagt ctccctcacc cgccgcctcg tcgcccagga 841 agagggaaac tcctccggct gcacaaaatg gctccgcagt ggccataccc atcgaacagg 901 agctgctgac caagtgcttc ctgcacatcc gtggcatgac ctgcgccagc tgcgtggcgg 961 ccatcgagaa gcactgcaag aagatctacg gcctggacac cattttggtg gccctgctgg 1021 ccgccaaggc ggaggtcaag ttcaatgcca acgtggtgac ggccgagaat atagccaaat 1081 ccatcacaga gctcggcttc cccaccgaac tcatcgatga gcccgacaac ggcgaggcgg 1141 aggtggagct ggagatcatg ggcatgacct gcgcctcctg cgtcaacaag atcgagagcc 1201 atgtgctcaa gataaagggc gtgaccagcg cctccgttac actgctaacg aaaaggggca 1261 aattccggta catcaccgag gacacgggac cccggagcat ctgcgaggcg atcgaggggc 1321 tgggcttcga ggccaagctg atgaccgggc gggacaagat ggcccacaac tacctggagc 1381 acaaggagga gatccggaag tggcgcaacg ccttcctcgt ctcgctgatc ttcggcggac 1441 cctgcatggt ggccatgatc tacttcatgc tggagatgag cgacaagggc cacgcgaaca 1501 tgtgctgcct cgttcccggc ctttcgatgg agaacctggt gatgttcctg ctctcgacgc 1561 ccgtccagtt cttcggcggc ttccacttct acgtgcagtc gtatcgggcg atcaagcacg 1621 gcaccaccaa catggacgta ctgatctcga tggtcacgac catttcgtat gtctactccg 1681 tggccgtggt gattgccgcc gttctgctgg agcagaacag ctcaccgctt accttcttcg 1741 atacgccgcc catgctgctg atcttcatct cgctgggccg ctggctggag cacatagcca 1801 agggcaagac ctcggaggcg ctgtccaagc tactgtccct caaggcggcc gatgcgctgc 1861 tggtggagat ctcgccggac tttgatatcg tcagcgagaa ggtgatatcc gtggactatg 1921 tgcagcgcgg cgacatcctg aaggtgattc cgggagccaa agtcccggtg gatggcaagg 1981 ttctctacgg ccattccagt tgcgatgagt cgctcatcac cggcgaatcc atgccggtgg 2041 ccaagcgcaa gggttcagtg gttatcggcg gctccatcaa ccagaacggc gtgctcctgg 2101 tggaggctac gcacaccgga gagaatacga cgctggcgca gattgtgcga ctggtggagg 2161 aggcgcagac cagcaaggcg cccatccagc agctggccga tcgcattgcc ggctactttg 2221 tgcccttcgt cgttgtggtt tccagcatca cgctgattgc ctggatcatc atcggtttcg 2281 ccaatccgaa tctggtgccc gtggccatgg agcacaagat gcacatggac cagaacacca 2341 tcatcgttag ctatgccttc aagtgtgcgt tgagtgtgct ggccattgcc tgtccctgtg 2401 ccttgggcct ggccacgccc acagccgtga tggtggccac cggaacggga gcgatcaacg 2461 gagtgctggt gaagggagcc accgccctgg aaaatgccca caaggtgaag actgtggtct 2521 tcgacaagac gggcaccata acccacggca ccccgatgac cagcaaggtc accctcttcg 2581 tccgcgccca agtctgcagc ctggctcgag ctctgacgat tgtgggcgcc gccgagcaga 2641 acagcgagca tcccattgcc tccgccattg tgcactttgc caaggacatg ctgaatgtgg 2701 gctcttctcc acagggtggt agcttcggca agagcagcca tttccaggcc gttcccggct 2761 gtggcatccg cgtcaccgtc tccaactacg agcaaacgct gcgacaggcc tgcaatgccg 2821 agcggatcat caactacgag aatctgcatc gcaatagtcc gctggaatcg gtcccagtgg 2881 acaatggagc gagtatcgag catctgctgc cgcagcacag cgtgcgcaag tcgatggaac 2941 tgaacaacca gcagttgcta tccgacttgg tactggaaac ggaggagcaa ctcaccacgg 3001 atcagccatt aattgatggc cccgagatcc tagtgctcat tggcaatcgc gagtggatgc 3061 agcgcaatgg catcgaggtg ccgctggaga ttagcgactg catgacgcac gaggagcgaa 3121 agggacacac cgcagtgctg tgcgccctca acgggcagct ggtttgcatg tttgccgtct 3181 cggacatggt caagccggag gcccatctcg ccgtctacac gctgaagcgg atgggcatcg 3241 atgtggtgct gctgacgggg gataacaaga acacagcggc cagcatagcc agagaggttg 3301 gcatacgaac cgtttatgcg gaggtcctac cctcgcacaa ggtggccaag atccagcgca 3361 tccaggccag cggcatccgc gtggccatgg tgggcgatgg ggtcaacgat agtccggcgc 3421 tggcgcaggc ggatgtgggc ataacgattg ccgctggcac ggatgtggcc gccgaggcct 3481 ccgacattgt tctcatgcgc aacgacctgc tcgatgtggt ggcctgcctg gatttgtccc 3541 gctgcacggt gcgtcgcatt cgctacaact tcttcttcgc cagcatgtac aatctgctgg 3601 gcattccact ggccagcggt ctgttcgccc cctacggctt caccctgctg ccgtggatgg 3661 cctccgtggc catggccgcc agttcagtga gcgtggtgtg ctcctcgctg ctgctgaaga 3721 tgtaccgcaa gccgacggcc aagacgctgc gcacggcgga gtacgaggcg cagttggcgg 3781 cggaacgggc aggtggctct gagtttgaac tggacaagct ctcccttcat cgcggcctcg 3841 acgatctgcc cgaaaagggg ggcaggctgg ccttcaagcg gtccagcaac tcgctcatct 3901 cgcgcatctt catgcagggc aatgggggca tcagctcgcc gaatgccaag catgaggagg 3961 gactgctgga tcccgaggag cagtacgacg ggcgcaccaa gatcgtgagg agtcgctatc 4021 atgccagcga cagcaccgaa ctgcagaagc tgtgagagat cagaagctga acgcaaccac 4081 acaatccaac cgaggacctc aaaacgacaa attttcagtg aaattctttt tgcgggcttt 4141 aaattgaact agtaagagag agcgaattat aagacctgtg taaatatttg cagattgatt 4201 gttttttgac aaggaatagg cagtaggatc tttgatctat tcgcgggtct aatatgattt 4261 tgtaaatccc acatgggcaa aagataaaga aggtgtgtgc tcagtatgta aatatagctc 4321 aaacacaaaa tatttaattt atattttaag tactcccttt tgaactaccg agtcgccttc 4381 ttatcttttc ctatttcgag agttacaaac tctatattag atctaaggga taaatcgaaa 4441 atgtaatcgt actcctgatt ccagggtttt ttgttgtata catatggccg tctaaaaaca 4501 atagatttta gaccggcact cgcaccgtcc cttttttcta caacatattt gttattttcc 4561 cctttttttt aaataagaaa ctttaaacat ttatacgagt tttctgtttt atacaataat 4621 tttcttactc ctctttttcc gctctattat gcctatcata attaccatta ttattattat 4681 tattattcta tacaaactat tttttttgtg ttacgattgt aagttaaata ttattattaa 4741 gttcaacgga acaaaggcaa aaaccagaca tcaaccatca ttgaactatt gttacctatt 4801 gttaatacgc attatcatat agccacaaaa acacaaaagg aagaataaat caaatgaaat 4861 ccaatccaaa agacgaacat cgaacaactt gaccccatat cggctttaat ccttagttgt 4921 gcaatcgcag gaggacgtac acttgtaaaa caattgggca caagcatcaa acaaaacgaa 4981 agacattctt tatatgtaac tttaaagttt atatacaaaa cgcattgtta atgtacatat 5041 gaataaaacg agagattcgg aggagaatcc ccatactggc aaaatgcaaa