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LOCUS XM_017160465 3063 bp mRNA linear INV 09-DEC-2024 (Hsc70-3), transcript variant X3, mRNA. ACCESSION XM_017160465 VERSION XM_017160465.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160465.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3063 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3063 /gene="Hsc70-3" /note="heat shock protein 70 cognate 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins" /db_xref="GeneID:108070126" CDS 173..2143 /gene="Hsc70-3" /codon_start=1 /product="endoplasmic reticulum chaperone BiP" /protein_id="XP_017015954.1" /db_xref="GeneID:108070126" /translation="MRLCILLAVVAFVGLSLGEEKKEKDKELGTVIGIDLGTTYSCVG VYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVFDAKRLIGR EWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQGAKVFAPEEISAMVLGKMKETAEAY LGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYGLDKKEGEK NVLVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLYKKKKGK DIRKDNRAVQKLRREVEKAKRALSGSHQVRIEIESFFEGDDFSETLTRAKFEELNLDL FRSTLKPVQKVLEDADMNKKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDE AVAYGAAVQAGVLSGEQDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQV FSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVSFEIDANGI LQVSAEDKGTGNKEKIVITNDQNRLTPEDIDRMIRDAEKFADEDKKLKERVESRNELE SYAYSLKNQIGDKDKLGAKLSDEEKTKLESAIDESIKWLEQNPDADPEEYKKQKKDLE AIVQPVIAKLYQGAGGAPPPEGGDDADLKDEL" misc_feature 266..2101 /gene="Hsc70-3" /note="heat shock 70 kDa protein; Provisional; Region: PTZ00009" /db_xref="CDD:240227" polyA_site 3063 /gene="Hsc70-3" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgtcgctcta ccgcgacgtc gacgtcggtc aatgtcagcg gagcagagcc gcgatgagca 61 cagcgcttag cacttgccgg gcagttagcc attggagtag acgtgttctt taaccgatct 121 ggacttatat atatacatag ccccaataaa gtatttctga gagatcttca atatgaggtt 181 atgcatatta ctggctgtcg tggccttcgt tggcctctcg ctgggcgagg agaagaagga 241 gaaggacaag gagctgggca cagtgatcgg cattgatttg ggcaccacct actcctgcgt 301 tggtgtttac aagaacggac gcgtggagat catcgccaac gaccagggca accgcatcac 361 cccctcctac gtggccttca ccgccgacgg tgagcgtctc atcggagatg ccgccaagaa 421 tcagctgacc accaatcccg agaacaccgt cttcgatgcc aagcgtctga tcggtcgcga 481 gtggtcggac accaatgtgc agcacgacat caagttcttc cccttcaagg ttgtcgagaa 541 gaactcgaag ccccacatta gcgtggacac gtcgcagggc gccaaggtct ttgcccccga 601 ggagatctcc gccatggttc tcggcaagat gaaggagacc gccgaggcct atctgggcaa 661 gaaggtcacc catgccgtcg tcaccgtgcc ggcctacttc aacgatgccc agcgtcaggc 721 taccaaggat gccggagtga tcgccggtct gcaggtgatg cgcatcatca acgaacccac 781 tgccgcggcc attgcctacg gtctggacaa gaaggagggc gagaagaacg tgctggtgtt 841 cgatctgggc ggcggcacct tcgatgtctc cctgctgacc atcgataacg gcgtgttcga 901 ggtggtggcc accaacggcg acacccattt gggcggtgag gacttcgatc agcgtgtgat 961 ggaccacttc atcaagctgt acaagaagaa gaagggcaag gatatccgca aggacaaccg 1021 cgctgtccag aagctgcgtc gcgaggtcga gaaggccaag cgcgctctgt ccggctccca 1081 ccaggtgcgc atcgaaatcg agtcgttctt cgagggcgac gacttctccg agaccctgac 1141 ccgcgccaag ttcgaggagc tgaacctgga cctcttccgt tccaccctga agccagtgca 1201 gaaggtgctc gaggatgcgg acatgaacaa gaaggacgtg cacgagattg tgctggttgg 1261 cggctccacc cgcatcccca aggtgcagca gctggtcaag gacttcttcg gcggcaagga 1321 accatcgcga ggcatcaatc ccgacgaggc tgtcgcctac ggtgctgccg tccaggctgg 1381 cgtgctctcc ggcgaacagg acaccgatgc cattgtgctg ctcgatgtga acccactgac 1441 catgggcatt gagaccgtcg gcggtgtgat gaccaagctg attccccgca acaccgtcat 1501 ccccaccaag aagtcgcagg tgttctccac cgcctccgat aaccagcaca ccgtcaccat 1561 tcaggtgtac gagggcgagc gtcccatgac caaggacaac catctgctcg gaaagttcga 1621 tctgactggc attcccccag ctcctcgtgg cattccccag atcgaggtct cgttcgagat 1681 cgacgccaac ggcatcctgc aggtcagcgc cgaggacaag ggcaccggca acaaggagaa 1741 gatcgtgatc accaacgacc agaaccgcct gacgcccgag gacatcgatc gcatgatccg 1801 cgacgccgag aagttcgccg acgaggacaa gaagctgaag gagcgcgtcg agtcgcgcaa 1861 cgagctggag tcgtatgcct acagcctgaa gaaccagatc ggcgacaagg acaagctggg 1921 cgccaagctg agcgacgagg agaagaccaa gctggagtcg gccatcgatg agtcgatcaa 1981 gtggctggag cagaatcccg atgccgatcc cgaggagtac aagaagcaga agaaggatct 2041 ggaggccatc gttcagccgg tgatcgccaa gctgtaccag ggtgctggcg gtgctcctcc 2101 cccagagggc ggcgacgatg ccgatctcaa ggacgagctg taagatggcc ccaaagcaca 2161 tacacacaca gcccagccca catccattcg agatcatagt gttggaatta attcagactg 2221 attaaacaat tataacttaa ttgcaaacgc agtagccaca acaacaacaa caagaagaag 2281 aacagcaaat atagcagaga ccacaacagc aacagataat actactttat agccctcagc 2341 agccatcccc cgccccccat gcccgcccac catccattcg acctttaagg caaactatcc 2401 aaaactaaag aaaacaaatc acaatccttt ttttacattt tttttttttt ttacacttta 2461 atttaaagta tttttttgtc aactaaaaat atgagaaatg taataacgat ttattcgagt 2521 gttcctcgca tttctcgcct ccttccgccc acttccccca cgttagctgc ataattatgt 2581 aaaactgtaa atttttttat atatatacac ataactgtga cgactgtaag ccccgagatc 2641 cccgaggagt cgcaatccag taggttagcc tgcggatgtg taaagcggaa gcaacaaaca 2701 aacaaacaaa cacaaaacac agacaaatgt tatatgtata agcgcgtaat agccggattc 2761 cactggcaca tttgcattgc tgctcactgc ggaaaaggac tttgaatttt ccggatagca 2821 atgcgaatgt gtcgggggat tctggccgca tagaagagat gtagaagagc acagggagct 2881 gcgggtcgtg cggataatag gtcgatgaga atgcaaacgg caagagataa accacaaaat 2941 cacaagaaaa ccactaaaag cagcggccac tccatcagcc aggctaaata aaaggattct 3001 tcgattttac gaaggatttt ctaatttatt taaaaataaa ataaaaaaaa ttgaaaaaag 3061 aaa