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LOCUS XM_017160464 3069 bp mRNA linear INV 09-DEC-2024 (Hsc70-3), transcript variant X1, mRNA. ACCESSION XM_017160464 VERSION XM_017160464.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160464.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3069 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3069 /gene="Hsc70-3" /note="heat shock protein 70 cognate 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins" /db_xref="GeneID:108070126" CDS 179..2149 /gene="Hsc70-3" /codon_start=1 /product="endoplasmic reticulum chaperone BiP" /protein_id="XP_017015953.1" /db_xref="GeneID:108070126" /translation="MRLCILLAVVAFVGLSLGEEKKEKDKELGTVIGIDLGTTYSCVG VYKNGRVEIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVFDAKRLIGR EWSDTNVQHDIKFFPFKVVEKNSKPHISVDTSQGAKVFAPEEISAMVLGKMKETAEAY LGKKVTHAVVTVPAYFNDAQRQATKDAGVIAGLQVMRIINEPTAAAIAYGLDKKEGEK NVLVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLYKKKKGK DIRKDNRAVQKLRREVEKAKRALSGSHQVRIEIESFFEGDDFSETLTRAKFEELNLDL FRSTLKPVQKVLEDADMNKKDVHEIVLVGGSTRIPKVQQLVKDFFGGKEPSRGINPDE AVAYGAAVQAGVLSGEQDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQV FSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVSFEIDANGI LQVSAEDKGTGNKEKIVITNDQNRLTPEDIDRMIRDAEKFADEDKKLKERVESRNELE SYAYSLKNQIGDKDKLGAKLSDEEKTKLESAIDESIKWLEQNPDADPEEYKKQKKDLE AIVQPVIAKLYQGAGGAPPPEGGDDADLKDEL" misc_feature 272..2107 /gene="Hsc70-3" /note="heat shock 70 kDa protein; Provisional; Region: PTZ00009" /db_xref="CDD:240227" polyA_site 3069 /gene="Hsc70-3" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgtgtgtgag cgtgtcgcgg cccgtgactg tgtgcgtgcg tagaaagcgc cggcaaaaaa 61 gtcagatatt ctgctgctct gtcagttccg tttgaagcgt cgagaaagca cattaaatcg 121 aaaccaactc gaaatagtca gcggctcagc gataagttat ttctgagaga tcttcaatat 181 gaggttatgc atattactgg ctgtcgtggc cttcgttggc ctctcgctgg gcgaggagaa 241 gaaggagaag gacaaggagc tgggcacagt gatcggcatt gatttgggca ccacctactc 301 ctgcgttggt gtttacaaga acggacgcgt ggagatcatc gccaacgacc agggcaaccg 361 catcaccccc tcctacgtgg ccttcaccgc cgacggtgag cgtctcatcg gagatgccgc 421 caagaatcag ctgaccacca atcccgagaa caccgtcttc gatgccaagc gtctgatcgg 481 tcgcgagtgg tcggacacca atgtgcagca cgacatcaag ttcttcccct tcaaggttgt 541 cgagaagaac tcgaagcccc acattagcgt ggacacgtcg cagggcgcca aggtctttgc 601 ccccgaggag atctccgcca tggttctcgg caagatgaag gagaccgccg aggcctatct 661 gggcaagaag gtcacccatg ccgtcgtcac cgtgccggcc tacttcaacg atgcccagcg 721 tcaggctacc aaggatgccg gagtgatcgc cggtctgcag gtgatgcgca tcatcaacga 781 acccactgcc gcggccattg cctacggtct ggacaagaag gagggcgaga agaacgtgct 841 ggtgttcgat ctgggcggcg gcaccttcga tgtctccctg ctgaccatcg ataacggcgt 901 gttcgaggtg gtggccacca acggcgacac ccatttgggc ggtgaggact tcgatcagcg 961 tgtgatggac cacttcatca agctgtacaa gaagaagaag ggcaaggata tccgcaagga 1021 caaccgcgct gtccagaagc tgcgtcgcga ggtcgagaag gccaagcgcg ctctgtccgg 1081 ctcccaccag gtgcgcatcg aaatcgagtc gttcttcgag ggcgacgact tctccgagac 1141 cctgacccgc gccaagttcg aggagctgaa cctggacctc ttccgttcca ccctgaagcc 1201 agtgcagaag gtgctcgagg atgcggacat gaacaagaag gacgtgcacg agattgtgct 1261 ggttggcggc tccacccgca tccccaaggt gcagcagctg gtcaaggact tcttcggcgg 1321 caaggaacca tcgcgaggca tcaatcccga cgaggctgtc gcctacggtg ctgccgtcca 1381 ggctggcgtg ctctccggcg aacaggacac cgatgccatt gtgctgctcg atgtgaaccc 1441 actgaccatg ggcattgaga ccgtcggcgg tgtgatgacc aagctgattc cccgcaacac 1501 cgtcatcccc accaagaagt cgcaggtgtt ctccaccgcc tccgataacc agcacaccgt 1561 caccattcag gtgtacgagg gcgagcgtcc catgaccaag gacaaccatc tgctcggaaa 1621 gttcgatctg actggcattc ccccagctcc tcgtggcatt ccccagatcg aggtctcgtt 1681 cgagatcgac gccaacggca tcctgcaggt cagcgccgag gacaagggca ccggcaacaa 1741 ggagaagatc gtgatcacca acgaccagaa ccgcctgacg cccgaggaca tcgatcgcat 1801 gatccgcgac gccgagaagt tcgccgacga ggacaagaag ctgaaggagc gcgtcgagtc 1861 gcgcaacgag ctggagtcgt atgcctacag cctgaagaac cagatcggcg acaaggacaa 1921 gctgggcgcc aagctgagcg acgaggagaa gaccaagctg gagtcggcca tcgatgagtc 1981 gatcaagtgg ctggagcaga atcccgatgc cgatcccgag gagtacaaga agcagaagaa 2041 ggatctggag gccatcgttc agccggtgat cgccaagctg taccagggtg ctggcggtgc 2101 tcctccccca gagggcggcg acgatgccga tctcaaggac gagctgtaag atggccccaa 2161 agcacataca cacacagccc agcccacatc cattcgagat catagtgttg gaattaattc 2221 agactgatta aacaattata acttaattgc aaacgcagta gccacaacaa caacaacaag 2281 aagaagaaca gcaaatatag cagagaccac aacagcaaca gataatacta ctttatagcc 2341 ctcagcagcc atcccccgcc ccccatgccc gcccaccatc cattcgacct ttaaggcaaa 2401 ctatccaaaa ctaaagaaaa caaatcacaa tccttttttt acattttttt ttttttttac 2461 actttaattt aaagtatttt tttgtcaact aaaaatatga gaaatgtaat aacgatttat 2521 tcgagtgttc ctcgcatttc tcgcctcctt ccgcccactt cccccacgtt agctgcataa 2581 ttatgtaaaa ctgtaaattt ttttatatat atacacataa ctgtgacgac tgtaagcccc 2641 gagatccccg aggagtcgca atccagtagg ttagcctgcg gatgtgtaaa gcggaagcaa 2701 caaacaaaca aacaaacaca aaacacagac aaatgttata tgtataagcg cgtaatagcc 2761 ggattccact ggcacatttg cattgctgct cactgcggaa aaggactttg aattttccgg 2821 atagcaatgc gaatgtgtcg ggggattctg gccgcataga agagatgtag aagagcacag 2881 ggagctgcgg gtcgtgcgga taataggtcg atgagaatgc aaacggcaag agataaacca 2941 caaaatcaca agaaaaccac taaaagcagc ggccactcca tcagccaggc taaataaaag 3001 gattcttcga ttttacgaag gattttctaa tttatttaaa aataaaataa aaaaaattga 3061 aaaaagaaa