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LOCUS XM_017160461 4456 bp mRNA linear INV 09-DEC-2024 (LOC108070125), transcript variant X1, mRNA. ACCESSION XM_017160461 VERSION XM_017160461.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160461.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4456 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4456 /gene="LOC108070125" /note="uncharacterized LOC108070125; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108070125" CDS 412..3093 /gene="LOC108070125" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_017015950.2" /db_xref="GeneID:108070125" /translation="MRVVAMVSGGKDSCYNMMQCVAEGHEIVALANLHPKDRDELDSF MYQTVGHMGIEILASAMGLPLYRRETKGKSTQTGKQYVPTDDDEVEDLYSLLETCKHE LQVDAVAVGAILSDYQRVRVENVCSRLNLISLAYLWRRDQTELLQEMIDCQVHAIIIK VAALGLVPDRHLGKSLREMQPHLLKMRDKYGLNVCGEGGEYETFTLDCPLFRQRIVVE DIQTIISSADPICPVGYINFTKLTLQPKEAAGASSSGGGGGGSEVVFVKRSLDYISDL NESTYSDLSDPDFSETELELIEKETRLRESLSQSELISRSNSFGRHLAATASSPIPIV TKSASVDEPTGGGGGGGGPPICSASACASMLLTTTATNAADGLSSLASSQSHGGGHGL GSSTAAVCGSLSLAISSLGLSANTCCHPGGGGVGIGVGAPLATTQPPSPLKYEREFRP LANEARAAINAKGWMWLAGIQGSGSEGIEQGMQQALDTLGEMCQAKGYDLQDLCYVTL YVRSIGEYPALNRVYHRAFDFHNPPTRVCVECPLPDGCHVVMEAIAYRQPVAGAISSA EERDREGEETAAALLNGRRNTMHVQGISHWAPANIGPYSQSTRIGDITYISGQIALVP GSMTIIEGGIRPQCKLTLRHISRIAKAMNAHGQLRDVVHGICFVTHPAFIGEARRQWE RRTTNAIMDYIVLPALPREALVEWQVWAHTHNDRFDYEETGCSVGDYTISIRRRWNYE NNCAAIVCYVSTGLASSTTQLTQLSDDILGNHCRLAQSVSAEHLDEILTYVVNRLLKD YPLAKKQPTNNSGTPPATPTQPGGAGGDQQQPVPAIHLKLFYQVNAAPATDLLLQALH DFRVKCQETAAIVYTVLPACSLHNFSTFLSICGVRHE" misc_feature 415..1056 /gene="LOC108070125" /note="putative ATP pyrophosphatase PF0828 and similar proteins; Region: AANH_PF0828-like; cd01994" /db_xref="CDD:467498" misc_feature 1786..2076 /gene="LOC108070125" /note="A group of hypothetical eukaryotic proteins, characterized by the presence of an adenine nucleotide alpha hydrolase (AANH)-like domain located N-terminal to two distinctly different YjgF-YER057c-UK114-like domains. This CD contains the first of these...; Region: eu_AANH_C_1; cd06155" /db_xref="CDD:100012" misc_feature order(1792..1794,1798..1803,1807..1809,1813..1818, 1915..1917,1921..1926,1930..1932,1936..1938,1969..1971, 1978..1980,1990..1992,2005..2031,2056..2058,2062..2064, 2068..2070) /gene="LOC108070125" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100012" misc_feature order(1957..1959,1969..1971,2014..2016,2056..2058) /gene="LOC108070125" /note="putative active site [active]" /db_xref="CDD:100012" misc_feature 2221..2541 /gene="LOC108070125" /note="A group of hypothetical eukaryotic proteins, characterized by the presence of an adenine nucleotide alpha hydrolase (AANH)-like domain located N-terminal to two distinctly different YjgF-YER057c-UK114-like domains. This CD contains the second of these...; Region: eu_AANH_C_2; cd06156" /db_xref="CDD:100013" misc_feature order(2221..2226,2233..2235,2239..2241,2248..2250, 2254..2256,2260..2265,2389..2391,2395..2400,2404..2406, 2410..2412,2443..2445,2452..2454,2473..2496,2524..2526, 2530..2532,2536..2538) /gene="LOC108070125" /note="homotrimer interaction site [polypeptide binding]; other site" /db_xref="CDD:100013" misc_feature order(2221..2223,2431..2433,2443..2445,2479..2481, 2524..2526) /gene="LOC108070125" /note="putative active site [active]" /db_xref="CDD:100013" polyA_site 4456 /gene="LOC108070125" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttagtgggac cgctcgtgcc ggtgttttca gagcaacgcc atctggcaac gctggggcca 61 aaaagcatta gcggcaaaaa aaataaattt tttgccttta cgttggcgta aaagttctgt 121 cgcacaacaa ttacaaagct cggccagctt ggttgcacag gagcggagcg gaggcggcgg 181 aaaacgggag aaaaacaaac caaaagacac ggcaaatcag aaatcagtct agtcaacaaa 241 agcagaccaa atgagcacgc acttcgggac taacgagcag cacaaactaa gccaaaaata 301 aagctaaaga taaaagagag gcagcagaaa gcagcaggta acacacacgc acactagcgc 361 atcccccctc cccgtacact gagcgaaatc gaggcgaaaa tcggcggcaa gatgcgggtg 421 gtggccatgg tcagtggcgg caaggacagc tgctacaaca tgatgcagtg cgtcgccgag 481 ggccacgaga tcgtcgcgtt ggccaatctg catcccaagg acagagacga actggacagc 541 tttatgtacc agacggtcgg ccacatgggc atcgagattc tggccagcgc catgggattg 601 ccgctgtacc ggcgcgaaac caagggcaag agcacccaga ccggcaagca gtacgtgccc 661 accgatgacg acgaggtcga ggatctatat agtctgctgg agacatgcaa gcacgaactt 721 caggtggatg cggtggccgt gggcgccatc ctgtcggact accaacgcgt gcgtgtggag 781 aacgtgtgca gccgcctgaa cctgatatcc ctggcctacc tgtggaggag agatcagact 841 gaattgctgc aggagatgat cgactgccag gtgcacgcca tcatcatcaa ggtggctgcc 901 ctgggcctcg tgccggatcg acacctgggc aagtcgctgc gcgagatgca gccgcacctg 961 ctgaagatgc gcgacaagta cggactgaat gtgtgcggcg agggcggcga gtacgagacc 1021 ttcacgctgg actgcccgct cttccggcag cgcatcgtgg tggaggacat ccagacgatc 1081 atcagcagtg ccgatcccat ctgcccggtg ggctacatca acttcaccaa gctgacgctg 1141 cagccaaagg aggcggcggg cgcatccagc agcggcggcg gcggcggcgg cagcgaggtg 1201 gtgttcgtta agcgttcact cgactacatt agcgatctga acgagtcgac gtacagcgac 1261 ctcagcgatc cggacttcag cgaaacggag ctggagctga tcgagaagga gacgcggctg 1321 cgcgagtcgc tcagccagag cgagctgata tcgcgcagca actcctttgg ccgccacctg 1381 gccgccaccg cctcctcgcc gatacccatt gtcacgaaga gcgccagcgt cgacgagccc 1441 acaggcggag gaggaggcgg aggaggaccg ccgatctgtt ccgcctcggc ctgtgcctcc 1501 atgctgctga ccaccaccgc caccaacgcc gccgacggcc tgagcagcct ggccagctcg 1561 cagagccacg gcggtggcca tgggctcggc agcagcacgg ccgccgtgtg cggctcgctg 1621 tcgctggcca tctcctcgct tgggctcagc gccaatacct gctgccatcc gggaggagga 1681 ggagttggaa tcggagtagg agcacctttg gccaccacac agccgcccag tccgctgaag 1741 tacgagcggg aattccgtcc actagccaac gaggccagag cggccatcaa tgccaagggc 1801 tggatgtggc tggcgggcat acagggctcc ggttcggagg gcattgagca gggcatgcag 1861 caggccctgg acacgctggg cgagatgtgc caggccaagg gctacgatct gcaggacctg 1921 tgctacgtca cgctctacgt gcgctccatc ggcgagtatc cggcgctgaa tcgcgtctac 1981 catcgcgcct tcgacttcca caatccgccg acgcgcgtct gcgtcgagtg tccgctgccc 2041 gacggctgcc acgtggtgat ggaggccatt gcctaccgcc agccggtggc cggtgccatt 2101 tcgagtgccg aggagcggga ccgcgagggc gaggagacgg cggcggccct gctcaacggg 2161 cgtcgcaaca cgatgcatgt gcagggcatc tcgcactggg cgccggccaa cattgggccc 2221 tacagccagt cgaccaggat tggcgacatc acgtacatct ccggccagat cgccttggtg 2281 cccggcagca tgacaattat cgagggcggc atccgtccgc agtgcaagct cacgctgcgc 2341 cacatcagtc gcattgccaa ggcgatgaac gcccacggtc agctgcggga tgtggtgcac 2401 ggcatctgct ttgtgaccca tccggccttc attggggagg cacgtcgcca gtgggagcgt 2461 cgcaccacca atgcgatcat ggactacatt gtgctgccgg cgctgccgcg agaggcgctc 2521 gtggaatggc aggtgtgggc gcacacccac aacgatcgtt tcgactacga ggagactggc 2581 tgctcggtgg gtgactacac catctcgata cgacgtcgct ggaactacga gaacaactgt 2641 gcggccatcg tttgctacgt atccaccggt ttggcctcgt ccaccaccca actgacccag 2701 ctgagcgacg acatcctggg caaccactgc cgcctggcgc aatcggttag tgccgagcat 2761 ctggacgaga ttctcaccta tgtggtcaat cgcctgctga aggactatcc gctggccaag 2821 aagcagccga cgaataattc gggaacaccg ccggccacgc ccacgcagcc gggcggagcg 2881 ggcggagatc agcagcagcc tgtgccggcg atccatctga aattgttcta ccaagtgaac 2941 gccgcaccgg ccacggatct gctgctccag gcgctgcacg atttccgtgt gaagtgccag 3001 gaaacggccg ccattgtcta cacagtgctg cccgcctgca gcctgcacaa cttcagtacg 3061 ttcctgtcca tttgcggagt gaggcacgag taggagccgc acgcagggag ttggaggatg 3121 atgatagtga ggaggaaaat gatgaaacaa tttgctgcca ccgcaccaag cagaacacag 3181 aatatatata tatatacacc actatatata cacagaaata tgtataatgg atgggtctcc 3241 atttcgcatt ggcagaaagt aatctttgga taattccgag ccagttggct tttatatcaa 3301 atatttatga tttcttttaa attcgtctaa tgtctgttgt caatgggaat tcttttccaa 3361 ttacaagttt ttcccagtaa gatatttaac atgttcaggg ccaactgccg agtattatcc 3421 agagtttgct tactgtccca cccattttca gtttgcaaag aacacaaata gacccaatta 3481 aatgtaaaat cagcttgccc tttgttgata ttgttaacta gcagatgatc ctaagatcga 3541 gaagataccg tagagcctgc atgctgtatc tgtatccata gaatagctca cttcgtgtcg 3601 cagtttcgga ccaaactctc acaaaaaaaa ccaaaacatt caaaacggat ctatgcaact 3661 caagtgtttc agcaactagc gaaggaaaac caagcataca aattcaattt aaagcaactt 3721 tatatattat atacgaaaaa gaaaaagcaa aagcaaacca tttttgtgca ctctattgcc 3781 caagaaaatg caaaagaaac aaaccaacaa acaactgtaa ctatactctt atacaaacta 3841 ttaactatta accgtttttc gatgtgcttt tctttacgct ccgatttttt atatatatac 3901 atatataaat gtacatctca gcgatttttc ttcattttca aatagccaca aacttttgac 3961 caaacaaaaa aaacactcaa aaacgacagc attgtaaagc aattgatttt tatatgtcgt 4021 taagctttaa aaatactgtg gagagcagat gatgtggccc attcttcgac cacgtcgcat 4081 cattttcatt atcaataatc cgaatgtagc aaattcgcca tagagaacct agtttgtatc 4141 atcttttttt tatttttgtt ttaatagata tcgaaattac cgactagaga ttatcgaatg 4201 tgttgcttaa agtaccacat gtccatagtt tttcctgcac aatctgcgac agaaaacaaa 4261 cacgattttg gttggattcc acaccaaaat ttggtcaaca tatactttta taatgtaaag 4321 tacgatacga tatcgatggg gcgctgagcg ggggaatgat aaaaaaagat tattacatgc 4381 tattatgtat tgttatgaaa aaatatattg atattgattg agtgtcatta caaaagtcga 4441 aaaaaaacca aagaaa