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LOCUS XM_017160452 2782 bp mRNA linear INV 09-DEC-2024 variant X7, mRNA. ACCESSION XM_017160452 VERSION XM_017160452.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160452.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2782 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2782 /gene="Flo2" /note="flotillin-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108070114" CDS 16..1038 /gene="Flo2" /codon_start=1 /product="flotillin-2 isoform X6" /protein_id="XP_017015941.1" /db_xref="GeneID:108070114" /translation="MSAVWMGVFKVALIVGVTSLVVRRNLSFHLRTLTVEEVYKDRDQ FAALVREVAAPDVGRMGIEILSFTIKDVYDDVQYLASLGKAQTAVVKRDADAGVAEAN RDAGIREAECEKSAMDVKYSTDTKIEDNTRMYKLQKANFDQEINTAKAESQLAYELQA AKIRQRIRNEEIQIEVVERRKQIEIESQEVQRKDRELTGTVKLPAEAEAFRLQTLAQA KQCQTIEGARAEAERIRKIGSAEAHAIELVGKAEAERMRMKAHVYKQYGDAAIMNIVL ESLPKIAAEVAAPLAKTEEIVLIGGNDNITNDVTRLVAQLPPSINALTGVDLSKVLSK IPGAKA" misc_feature <91..1035 /gene="Flo2" /note="Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]; Region: YqiK; COG2268" /db_xref="CDD:441869" polyA_site 2782 /gene="Flo2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cagttgttcg acaacatgtc cgccgtgtgg atgggcgtct tcaaggtggc cctcatagtg 61 ggcgtcacct cgctggtggt caggcgcaat ttgtccttcc atttaagaac gcttacagtc 121 gaagaggtgt acaaggaccg cgaccagttc gcggctttag tccgcgaggt ggccgccccg 181 gacgtgggtc gcatgggcat cgagatcctc tccttcacca tcaaggacgt ctacgatgat 241 gtgcagtacc tggcctcgct gggcaaggcc cagacggccg tcgtgaagcg ggacgccgat 301 gccggcgtgg cggaggccaa ccgagatgcc ggaatccgtg aggccgagtg cgagaagagc 361 gccatggacg tgaagtactc gacggacacg aagatcgagg acaacaccag gatgtacaag 421 ctgcagaagg ccaatttcga tcaggagatc aacacggcca aggccgaatc gcagctggcc 481 tacgagctgc aggcggccaa gatccgccag cgcatccgta acgaggagat ccagatcgag 541 gtggtggagc gacgcaagca gatcgagatc gagtcgcagg aggtgcagcg caaggatcgc 601 gagctcaccg gcaccgtcaa gctgccggcc gaggcggagg ccttccgcct ccagaccctc 661 gcccaggcca agcagtgcca gaccattgag ggtgcccgtg ccgaggcgga gcgcatccgg 721 aagatcggat cggcggaggc ccatgccatc gagctggtgg gcaaggcgga ggcggaacgc 781 atgcggatga aggcccatgt gtacaagcag tatggcgacg cggccatcat gaacattgtc 841 ctcgaatcgc tgccgaagat tgccgccgag gtggctgccc cactggccaa gacggaggag 901 attgtcctga ttggcggcaa cgataatatc accaacgacg tgacccgctt ggtggcccag 961 ctgccgccct cgatcaacgc cctcaccgga gtggatctgt ccaaggtcct gtccaagatt 1021 cccggggcca aggcgtgaaa cctaatggag tgggacatcc aggaaatggc aatgacaacg 1081 taacgcaacg caaaggaatt gtaaccgatc tgaaaacggc aaggagagaa ggagacggca 1141 ggagagcgaa cgaaaaggac ggagctagtg tgcatttgtt agagagagac aacagcgagg 1201 cgtactcgaa acttacaatt tgagtttcga actgcaatcg aacgtagcaa aatgtactcc 1261 gatattatat ttatatatat atatatatct ttgtatatgt atatgcacac atgctataca 1321 cacatacact cgtctcgtct gtgtggtgtg ccagtgtgtg tgtgtgtgat gtttgcccgg 1381 gtaacaatca aaaaaacaaa agaaaagaaa aaccaacgtt aatctcagct aaagttatgc 1441 atttcgtacg caacattttg tggccttttc tctcgaaaac gaaaacgata acccgataac 1501 gataacaaaa aatcaacgtg aaatttgtat aactttaaag cgaaaaccat ttaagcagag 1561 tgttagctat ttatttacta tactatatat actatataca tgcagacatg ctataaacaa 1621 agagctcttc taagtaaccg catcaaaaat ttaatgccag acagtgatgt aaagatataa 1681 aagaacttac agtgttgtaa agttgcatat acatatgtag ccctttttct ctcacacaat 1741 ttcgatctgc taacgaaata catgacatct gtccaaaact acaactactg cctatcgact 1801 aaagccaaat ctataagcta gtgagccaaa tggaaagaga gagaaagagg gtgcgactat 1861 gaaagacgac cgatcgagtt cctattcata aaattcaacg gccaaactca accaactgta 1921 gagtttgtat aaaactagca ctcttttaga ctccccaatt ttagtttata gtataaatat 1981 aatacgtgtt tctcctgtat tttgttaatc gtttattttt acttggacgt gccataacgg 2041 gctcaagttt cgttttcagt aattcacatt taattttttg ttgcctttca ttatatctga 2101 tagttgctag aaaagccaag attatcatag ttatactcga tcgactgatg tcatttgtta 2161 atgagtgata tgcagcttta caacactgct ttctctgtag ttggcgctct tccaaaaccc 2221 acacacacac acttaccaac acttcagtgc acaaagagaa atcaatattt gttgttatac 2281 aaaaatttca taaaactatg tttcgattaa tatatttttt catggttttt tatatatatt 2341 ataacacata tttaactacg aatatgcatt tacaattttt gtactttatt cttacactgt 2401 ttagtttata gcaaaaggca agaaaatata aataaaatat ataaaaaagg gaactaattt 2461 tgttatttac taacatctta ctggaattta catagttaaa caatttatcc agctctttcg 2521 ttttgttaga gtaattaaac ctaatttttg taagcacttc tccgaatcac acacacccat 2581 tagacacaca cacccacata tatatttttt ttctattgta tattaagtgc aagtaatttt 2641 aattgtaatg cagtgtgaaa gagaaaaaga acaagaacaa caaccaaccg aagaactaaa 2701 ctaaaagcta aacctaaata aatcaaatgt aaaattttgt gtattttgtc gtaaataaat 2761 aaattgaaaa atacctgtaa aa