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LOCUS XM_017160431 2170 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017160431 VERSION XM_017160431.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160431.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2170 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2170 /gene="Cyp28c1" /note="Cytochrome P450 28c1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108070100" CDS 1..1506 /gene="Cyp28c1" /codon_start=1 /product="probable cytochrome P450 28c1" /protein_id="XP_017015920.2" /db_xref="GeneID:108070100" /translation="MLGSLLLGIATLLGGIYVFLVSNYGHWRRRGVTEPRVLPLFGSF PNMVWPRQHFTMDMRDIYMRYRNTHSFVGCFLLRAPKLLVLEPRLVYEIYVSAFSHFE NNDASKMIDIDKDRLVALNPFVLEGDEWRRQRAVFSTLLTNGRIRTTHAIMQRVCGDL CEFVARKSVGGLELDGIDLGLRFTGESLFDCVLGIQARTFSDNPLPVVRQNQVMSAEN RGLAIAGAACGLFPNLPRRLRPKVFPRSHDEFYASLISESLRLRRSKRQERNDFINHL LEMQRELDLSEEDMASHVMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLFEELQKSS PDGKLPDLDALIDLPYLSACFNESLRIYPAGGWSSKTCTKEFELRGSHHAEPLKLRPG DNLMVPIYALHNDPEFYPEPEAFRPERFLDGGLKRFKQQGIFLGFGNGPRQCVGMRLG LAMAKAALAAIVQRFEVLVSPRTRNGTQIDPVIFVGVHKGGIWLQFKPRKV" misc_feature 199..1479 /gene="Cyp28c1" /note="cytochrome P450 family 6 and similar cytochrome P450s; Region: CYP6-like; cd11056" /db_xref="CDD:410679" misc_feature order(388..390,400..402,421..423,562..564,886..891, 898..903,910..915,922..924,1075..1077,1102..1104, 1108..1110,1195..1197,1306..1314,1324..1338,1345..1350) /gene="Cyp28c1" /note="heme binding site [chemical binding]; other site" /db_xref="CDD:410679" misc_feature order(640..645,886..888,895..900,910..912,1096..1107) /gene="Cyp28c1" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:410679" polyA_site 2170 /gene="Cyp28c1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atgcttggat cgcttctgct gggtatcgcc acgctgctgg gcgggatcta cgtctttctg 61 gtgtccaact atggccactg gaggcgacga ggcgtcacgg agccccgggt tcttccgctc 121 ttcggctcct ttcccaatat ggtgtggcca cgccagcact ttaccatgga catgcgcgat 181 atctacatgc gttaccgcaa cacgcacagc tttgtgggtt gcttcctgct gcgcgccccc 241 aagctgcttg tcctcgaacc ccgcctcgtc tacgagatct atgtgagcgc cttcagtcac 301 ttcgagaaca acgatgcctc caagatgatc gacatcgaca aggatcgcct ggtggccctc 361 aatccgtttg tgctcgaggg cgatgagtgg cgccgccagc gggcggtctt ctcaacgctg 421 ctgaccaacg gacgcatccg caccacccat gccatcatgc agcgcgtctg tggggatctc 481 tgcgagttcg tggcgaggaa gtcggtcggc ggcttggaac tggatggcat tgatctcggt 541 ctccgcttta ccggcgaatc cctgttcgac tgcgttctgg gcatccaggc gcgcaccttc 601 agcgacaatc cactgccggt tgtccggcaa aaccaggtga tgtccgccga gaatcgcggt 661 ctggccatcg ccggtgccgc ctgcggtctc ttcccgaatc ttccccgccg cctgcgaccc 721 aaggtgtttc cccgatccca cgatgaattc tacgcctcgc tgatcagcga gtctctgcgc 781 ctgcgccgct ccaagcggca ggagcggaac gactttatca accatctgct cgagatgcag 841 cgggagctcg atctcagcga ggaggacatg gcctcgcatg tcatgacctt catgttcgac 901 ggcctggaca ccacctccaa cagcattgcc cactgtcttc tgctgcttgg tcgcaatccg 961 gattgccagc gacgtctgtt cgaggagctc cagaagtcca gtcccgacgg gaaactgccc 1021 gatctggacg ctctgatcga cctgccctac ctgagtgcct gcttcaatga gagcttgcgc 1081 atttatcccg ccggcggttg gtcctcgaag acctgcacca aggagttcga actgcggggc 1141 agtcaccatg cggaaccgct gaagctgcga cccggcgaca acctgatggt gcccatctat 1201 gccctgcaca acgatcccga gttctatccg gaaccggagg catttcgacc cgagagattc 1261 ctggacggtg gcctgaagcg attcaagcag cagggcatct tcctgggctt cggcaacgga 1321 cctcgtcagt gcgtcgggat gcgattgggc ctggccatgg cgaaggccgc cctggcggcc 1381 attgtccagc ggttcgaggt cctggtcagt cctcgcaccc ggaacggcac ccaaatagat 1441 cccgtcatct ttgtgggcgt ccacaagggc ggcatctggc tgcagtttaa accacgaaag 1501 gtctaggcta gaaaatctaa aaaatcgata gaaaaggaag atctggaaat tagatctggt 1561 attatccttg ggaagaggga ttgaaaaaat atcgacagtt tgctatgtat cgatacttaa 1621 tgtatttttc cttgaaaaca tcaatattat cgagtcgcta ttttaaaaac atcgaaaata 1681 tcgataattc ttaagttcta gtttaaaaag tatttactta ccaaaaagaa accccataaa 1741 aatatgaaat cctaaggagt gtataaaagt agaaagtatt tcctttaaaa cgagaaataa 1801 aataaagtga tataataatt tggtcataag gaaaccattg atattcttgc ttttatttgt 1861 ttattaccta aaaatattta atcatatttt atatctttct aaatccaaat attatttttc 1921 gcttgtgcat gggctttgcc gactagtttt caatgatgtt tttgttcgtc tcgagggttc 1981 aataaatatt agagtggttc atcttttgtt aggccgaggg cttagctgca ttcgattggg 2041 aattatgtca tcgggcggtg tccaaacact ggttttatat caataaggcg gaggcattga 2101 atgcatttat atggaataca ctcaacaaaa tatagttcaa aacaaaaaaa gaaaatttaa 2161 aaatgcaaaa