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PREDICTED: Drosophila takahashii Inhibitor of growth family, member


LOCUS       XM_017160124            2321 bp    mRNA    linear   INV 09-DEC-2024
            3 (Ing3), mRNA.
ACCESSION   XM_017160124
VERSION     XM_017160124.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017160124.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2321
                     /gene="Ing3"
                     /note="Inhibitor of growth family, member 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:108069868"
     CDS             121..2172
                     /gene="Ing3"
                     /codon_start=1
                     /product="inhibitor of growth protein 3"
                     /protein_id="XP_017015613.2"
                     /db_xref="GeneID:108069868"
                     /translation="MLYLEDYLEMIEHLPQELRDRFTEMRELDLAVQNNMDSLDKKAH
                     LFFKQCKRDELQHESMDTEFHSLRGEYFKVMEDADEKVAIATQIHELVERYLRRLDSE
                     LFKFKCELEADNNGITEILERRSLELDGNSTAATALLLSMNQKENRYYGGNSSANSLV
                     NSSSTGHSSSAATGPSSAAISLVSGAAVGVASLSSISGSGQLSSSQRHRKLEKRRETI
                     CTVPVQEKRANLNHSLPVVNSGAAAGSVSSSSSAGGPVGAAVAGHVASAQAQASASHI
                     GSIAATHLSLPVAVAGGSGSLVGGSLTSAAGSLVRQLPTNLAHSVLSSSGGGGTAGGA
                     TPTAGNATPVVTTGHAHSSGGAGGGATVTYNLQQLGGGAAASSAIAAAASQAIVATQQ
                     MQQGRRTASLKASYEAIHGTAGTTAEFWSQAGQSGLQPAAAGSVTVSAGTALTSGTSS
                     GSHHGSQHSQSHHSSHSHSHTHGHGHGHGHHSGSSGSSHHQEKKQKKKLTLPTVQPTT
                     AGGSSSGNSMGSASSSSMSVESHSVGKLTTTAMAMAAAAASGSTYMSVGGQTLVAMGT
                     AAGGGGLTEGGSTDVPAGMIAMNLPSATVAPGSSLTIGENGLVVEQTNEGEWSYDPNE
                     PRYCTCNQVSYGDMVACDNDACPYEWFHYPCVGITQPPKGKWYCPKCTASMRRRGNRK
                     N"
     misc_feature    127..429
                     /gene="Ing3"
                     /note="Inhibitor of growth proteins N-terminal
                     histone-binding; Region: ING; pfam12998"
                     /db_xref="CDD:463768"
     misc_feature    1999..2133
                     /gene="Ing3"
                     /note="PHD finger found in inhibitor of growth protein 3
                     (ING3) and similar proteins; Region: PHD_ING3; cd15585"
                     /db_xref="CDD:277060"
     misc_feature    order(1999..2001,2029..2046,2065..2070,2077..2079,
                     2101..2106,2110..2112,2116..2118)
                     /gene="Ing3"
                     /note="H3K4me3 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:277060"
     polyA_site      2321
                     /gene="Ing3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgcattaaa gccgttaccc cctctggtca cacttacgca ttttccgaaa aataaaaaac
       61 agcaaaagag ttgaaaatat aaattcctgg catttcctgc ggcgcttttc atcgcccatc
      121 atgctttacc tggaggacta cctggagatg atcgagcacc tgccgcagga gctgcgcgac
      181 cgcttcacgg agatgcgcga actggatctg gccgttcaga acaacatgga ctcgctggac
      241 aagaaggcgc acctgttctt caagcagtgc aagcgcgacg agctgcagca cgagtcgatg
      301 gacacggagt tccacagcct gcgcggcgag tacttcaagg tgatggagga cgccgacgag
      361 aaggtggcca ttgccacgca gattcacgag ctggtggagc gctacctgcg ccgcctggac
      421 agcgagctct tcaagttcaa gtgcgagctg gaggcggaca acaacggcat caccgagatc
      481 ctcgagcggc gctccctgga gctggacggc aactccacag ccgccactgc ccttctgctg
      541 agcatgaatc aaaaggagaa tcgctactat ggcggcaata gttcggccaa tagtctcgtg
      601 aacagcagct ccaccggtca ctcttccagt gccgccaccg ggccatcctc cgcggccatt
      661 tccctggtca gcggagccgc cgtgggcgtc gcctcgctgt ccagcatctc cggctccggc
      721 cagctgagct ccagccagcg gcaccgcaag ctggagaagc gccgcgagac catttgcacc
      781 gtgcccgtcc aggagaagcg cgccaatctg aatcactcgc tgccggtggt taattcgggt
      841 gccgccgcag gatcggtttc ctcctcttcc tccgccggtg gaccagtggg cgctgcagtt
      901 gccggtcatg ttgcatccgc ccaggcgcag gcctccgcct ctcacatagg cagcattgcc
      961 gccacgcatc tcagtttgcc agtggctgtc gccggtggaa gtggcagcct ggtgggtggc
     1021 tctctaacct cggcagctgg ctctctagtg cggcagctgc ccacgaatct ggcgcacagt
     1081 gtgctgagca gctcgggagg aggaggaaca gcgggaggag ctactccaac ggcagggaac
     1141 gccacgcccg tggtcacaac aggccacgcc cactctagcg gcggcgctgg aggaggagcc
     1201 acggtcacgt acaacctgca gcaactgggc ggcggagcag ctgcatctag tgccattgca
     1261 gcggccgcca gtcaggcgat tgtggccacg cagcaaatgc agcagggccg ccgaacggcg
     1321 agcttgaaag ccagctatga ggctatccat ggcaccgcag gcaccacggc ggagttctgg
     1381 tcgcaggcgg gacaatctgg cctgcagcca gcggcggcgg gatcggtgac ggtctctgca
     1441 ggcacggctt taaccagcgg caccagcagc ggctcgcatc atggctcgca gcactcgcag
     1501 tcgcatcaca gcagtcattc gcatagtcac actcacgggc atggccatgg acatggtcat
     1561 cacagcggca gcagcggcag cagtcaccac caggagaaaa agcagaagaa gaagctgacg
     1621 ctgcccacgg ttcagccgac gacggcgggc ggctcctcgt cgggcaactc aatgggctcg
     1681 gcctcctcgt cgtcgatgag cgtggaatcc cattccgtgg gcaagctgac cacaacggcc
     1741 atggccatgg ccgcggcagc agcctcggga tccacctaca tgtcggtggg tggacagact
     1801 ttggtggcca tgggaactgc agcaggtgga ggaggattaa cagagggcgg atccacggac
     1861 gtgccagctg ggatgattgc catgaatctg cccagcgcca cggtggctcc tggctccagt
     1921 ttgaccatcg gcgagaatgg tttggtcgtc gagcagacaa acgagggcga atggtcgtat
     1981 gaccccaacg aaccgcgcta ctgcacctgc aaccaggtgt cctacggcga catggtggcc
     2041 tgcgacaacg acgcctgccc ctacgagtgg ttccactatc cctgcgtggg catcacgcag
     2101 ccgccgaagg gcaagtggta ctgccccaag tgcaccgcct ccatgcggcg gcggggcaac
     2161 cgaaagaact gaggccgacc gagcctgctg gcgcccctct tccgcggcgg aggaggcgga
     2221 ggaagcggct ggtcgcgtcg ctagaggatg gggatgtgga tgaggaagtg gaggccaggg
     2281 agcagaagcc aagtattcaa taaaattagg tcagcaaggg a