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LOCUS XM_017159939 4227 bp mRNA linear INV 09-DEC-2024 (LOC108069728), mRNA. ACCESSION XM_017159939 VERSION XM_017159939.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017159939.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4227 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4227 /gene="LOC108069728" /note="uncharacterized LOC108069728; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108069728" CDS 51..3254 /gene="LOC108069728" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_017015428.2" /db_xref="GeneID:108069728" /translation="MALVHTFLGTWEIVCCTFEGKRELSGLEGIKFRLDDTSDITWYN DLVSPLPESKDCGTFCESASVLFSCETFDVHELNPRLVFGAFAGHSIEFSTNTLTPTD TLVLSCENWYAVECKRLQDGQAAGQEKQLSFGEALQESYFSDVMVKSSGGLEYALHAS ILRLNGFDCSMCVNSAPSSAAGAAARPAARTCHSGPNTPNPIRISVAPANDEGGHDKS LPRLNLSPIYLQPPCDFQTMPGLGTQRMHQFSSSFNCLSNGNAGDSASVARTTGLLSL ECGGGGGGGGGMYRLPPTSHSDSHLETSQSHCKNIFNFCQDLMLQPTPTPLPPATGLA ICSIRRPPLSPYRARSPSPFPSSMDTPPSSPLTPVGVLCNLPTFLLGPILHWLYTESL LPDLDEDVCEKLISFAESQPSLTKLVEPTRKYLRLIRLKKFVVNVTMDLHGILNRVIQ CINPGNITRDPALLYATFQDALRECAIGCAKVLQFCNIFITDATHMTRYQKNEIVKYV RTRIPIFMSQVQQLLQNVLGVFVGLSVDEKAELVNYLVPEIESTLFVLTAVIEEIKIS LEIMCKDLKCSHLDLHLQQQQADDAIVMQLQIADGGEPSPRPRRGAPVGLTLYDNLTD KQRLSSAENDLKFVLYMYEVRKMRDIYGRIVAALEIIKDKKSTFCEMDFLSKSSTIHQ NLEQLIMDIPAYIFIVENLSDRLDDKLGWKEFKFCFKLATSQINGVIAKLLDHKDGLR DAISQICLLVRKQEFTQSVIELGLLDGTSGLSNNLKMADHENNLNQGLSDKEKPIYLD RKQYYDYNSIKLNLIRHLCEPPIAASSNLSKNALRLLHSTQLADMEFEVHTYASTPSK SEAGTGSESATATETTTKALQVHSFKAHRVIVAARCEWFKKALMSGMQESINRKVIIT DTSPVIFRRLLLYLYGAPIDRTVGAEQVCELMLLADRYSIDDLKELCENTLYSLIDED SVVCLLGIADRYMATALKSKCLSFLSQHAQLTKCEIFKELPQTLQLEVMDLIHWFGRV SEPWNDRGFKPRSSSRHSLKSPSKPRSRSRKSSPSYM" misc_feature 2685..2906 /gene="LOC108069728" /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing (ZBTB) proteins, Kelch-like (KLHL) proteins, and similar proteins; Region: BTB_POZ_ZBTB_KLHL-like; cd18186" /db_xref="CDD:349497" misc_feature 2958..3116 /gene="LOC108069728" /note="BACK (BTB and C-terminal Kelch) domain; Region: BACK; cd14733" /db_xref="CDD:350515" polyA_site 4227 /gene="LOC108069728" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tctgcgcgag attaggcaac tccatccagg acactagacc ctcgaccgcc atggcactgg 61 tgcacacatt cctgggcacc tgggagatcg tctgctgcac cttcgaggga aagcgggagc 121 tttccggttt agagggcatt aaattccgcc tggatgacac cagcgatatt acctggtaca 181 atgacctggt cagcccactg cccgaatcga aggactgcgg caccttctgc gaatcggcca 241 gcgtgctctt cagctgcgag accttcgacg tccacgagct caatccgcgt ctcgttttcg 301 gtgcctttgc cggccacagc attgagttta gtaccaatac cttaacgccg actgatacgc 361 tggttttgag ctgcgagaac tggtatgccg tcgagtgcaa gcgcctgcag gatggccagg 421 ctgccggcca ggagaagcag ctgagcttcg gcgaggccct gcaggagtcc tactttagcg 481 acgtgatggt caagagctcc ggcggcctgg agtacgccct gcacgcctcc atccttcggc 541 tgaatggctt cgattgcagc atgtgcgtga atagtgctcc ctcgtcggcg gcgggggcgg 601 ccgctcgtcc tgcggcgagg acctgccaca gcggtccgaa tacccctaat cccattagga 661 tatccgtggc cccggccaac gatgagggcg ggcatgacaa gtccctgcca cgcctgaatc 721 tatcgcccat ttacctgcag ccgccctgtg acttccagac catgccaggc ttgggcaccc 781 agcgaatgca tcagtttagc agcagcttca attgcctgag caacggcaat gccggcgatt 841 cggcctcggt ggccaggacg acgggtctgc tgagcctcga atgtggcggt ggcggcggtg 901 gcggcggtgg catgtaccgt ctgccgccca cctcgcattc ggattcgcac ctggaaactt 961 cgcagtcgca ctgcaagaac atattcaact tctgccagga cctcatgctg cagccgacac 1021 ccacgcccct gccaccggcc actggtctgg ccatctgcag catccggagg ccgccgttgt 1081 cgccgtaccg cgcacgcagt ccctcgccgt tccccagctc catggacacg ccgccctcgt 1141 cgccactgac gcccgtgggc gttctgtgca acctgcccac cttcctgctg ggccccatcc 1201 tccactggct gtacacggag tcactgctac ccgatctgga cgaggatgtg tgcgagaagc 1261 tgattagctt cgcggaatcc cagccgtcgc ttaccaaact ggtggagccg actcgcaagt 1321 acctgcgact gatacgactc aagaaatttg tggtcaacgt tactatggat ctgcatggca 1381 ttctcaatcg ggtcattcag tgcattaatc cggggaacat tactcgcgat ccggcgctac 1441 tctatgcaac atttcaggat gccctgcgcg aatgtgccat aggctgcgcc aaggtgcttc 1501 aattctgtaa tatcttcatc acggacgcca cacacatgac acgatatcaa aagaacgaaa 1561 ttgtcaagta cgtacgcacc cgcattccca tttttatgtc gcaagttcaa cagctgctgc 1621 agaacgtact cggggtcttt gtgggcctga gtgtcgatga gaaggccgag ttggtgaatt 1681 acctagtacc tgaaattgaa tcaaccttat ttgtattgac cgctgtgata gaggaaatca 1741 aaatctcatt ggaaatcatg tgtaaggacc ttaagtgttc ccacttggat ctccacctac 1801 aacaacagca ggccgacgat gctattgtca tgcaattgca gattgccgat ggaggcgaac 1861 cctctccacg tcctcgtcgc ggtgctcccg tgggtctgac gctctatgat aatctcacgg 1921 acaagcagcg cctgagttcc gcggagaacg atctgaaatt cgttctctac atgtacgagg 1981 tgcgaaaaat gcgcgacatt tacggccgga ttgtggcggc cctggaaata attaaggaca 2041 aaaagagtac attctgcgaa atggattttc tgagcaaaag tagcacaatc caccagaacc 2101 tcgagcaact gatcatggac attcccgcat acatcttcat cgtggagaac ttgtcggatc 2161 gactggacga caaattgggc tggaaggagt tcaagttttg cttcaagctg gccaccagtc 2221 agataaacgg cgtcattgcc aagttactcg atcacaagga tggcctgcgg gatgcgatca 2281 gtcagatctg tttgctggtg cgaaagcagg agttcacaca gtccgtcatt gaattgggct 2341 tattggacgg caccagtggg ctgtcgaaca atctgaaaat ggccgatcat gagaacaacc 2401 taaatcaggg gctaagcgat aaggaaaagc cgatctatct ggatcgcaaa caatattatg 2461 attataatag cattaagtta aacctcatac gacatctctg tgagccaccc attgccgcca 2521 gtagtaatct ctcgaagaac gccctgcgtc tgctgcactc aacccaactg gccgacatgg 2581 agttcgaggt gcacacctat gcctcgacac caagcaaatc agaggcggga actggaagtg 2641 aaagtgcaac tgcaactgaa acaacaacga aggcccttca ggtgcacagc ttcaaggctc 2701 acagggtgat cgtcgccgct cgctgtgagt ggttcaagaa ggccctgatg tccgggatgc 2761 aggagtccat caatcgaaag gtcatcatca cagacacctc acccgtaata ttccggcgcc 2821 tgttgctcta cctctacggt gctcccatcg atcgtacagt tggcgccgaa caggtctgcg 2881 aactgatgct cctggcagat cgttactcga tcgatgatct caaggaattg tgcgaaaata 2941 ccctgtactc cctaattgac gaggactccg tggtctgcct actgggtatt gcggatcgct 3001 acatggccac cgcattgaag tcgaaatgtc tttcctttct ctcgcaacat gcgcaactga 3061 ccaagtgtga aatattcaag gaattgccac agacacttca gctagaggtt atggatttga 3121 tacattggtt tggacgcgtc tcggagccgt ggaacgatcg cgggttcaag ccgcgcagca 3181 gctcgcggca cagccttaag agtccttcga agccacgctc gcgatcccgc aagtcctcgc 3241 cctcctacat gtgacgccga caaagcgcca ttgaacacac gaatgccaac ttcttgtgat 3301 aattttagaa gacttcgcaa tccagacgga taatatagtc agtaaggaag tgagggcata 3361 atgaaagcca tgagtttaga cttaaccggg tgagaggaag attgtttaaa tcagctacag 3421 gaatgacagg ggctctcgtc ccgcgtctct gtcctggtga aatataacat aatatcaccg 3481 gggcagaagg actagcccta aatatcaagc caaagagcga aaggcacaca tgacctgatt 3541 ttaatgagtt ttactaagtt cactagtaga tacatagata ggaatttggc gtattcacac 3601 ttttctctaa ttaatttacg tatgtgtagg aatgatattt ccacaggtgt tacccattag 3661 ggccagacaa ctgaaatatg taggtagaag cactagatcg aattgatttt tggacaaaga 3721 tcggtgtaac agttacgtta tgtaaataca caattgagta atatatatag aaagaatttt 3781 cgaaaccact cctttatttt gagatttctt tagttttgtg gtccacttgt gaggtaggtt 3841 agttgtactc ttgtattctg acgggtaggt agaatttagt cctttggaga agccaaagtg 3901 aataattgtt ttatattggg caaacggaat attgacataa taccaacatt ttcggtccac 3961 cgaagattat gtgctacact attttaaact aactagtgta ttttgacata tagacacaaa 4021 ttaaatttaa cattagacta ttgaccccgt gacgaattcc cttacagtgg ctatgggaaa 4081 aagggcggat tttaagtaac gaacgcagcg tattttttca ttcgatttga aagcgtatca 4141 aattaacaaa atatatgtac aaatattatg tgtaaattat attattgtac ttattcaata 4201 catttcttgt tgtcttttta aaacata