PREDICTED: Drosophila takahashii pre-mRNA-splicing factor 38B

LOCUS       XM_017159725            1306 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108069589), transcript variant X2, mRNA.
ACCESSION   XM_017159725
VERSION     XM_017159725.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017159725.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1306
                     /gene="LOC108069589"
                     /note="pre-mRNA-splicing factor 38B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108069589"
     CDS             152..964
                     /gene="LOC108069589"
                     /codon_start=1
                     /product="pre-mRNA-splicing factor 38B isoform X2"
                     /protein_id="XP_017015214.2"
                     /db_xref="GeneID:108069589"
                     /translation="MYLRYTQPPSDLYDWYEDYLQDEEEIDVKAGGGQVLTIGQMVYQ
                     FMTKLDWFSTLFPRIPVPIQKQIEKKIEQYCREQGLTVNQLSSGRSAGGQGAGGGGTG
                     AAGQDADYQEYQDGGAGMDRGGGRGGGHAAAASNARPNAYPPPMNYRNDHDDRDYYAA
                     ASGSSYARGRGGYEDYPPAPLPPQMPYGSGGERERERDRVRDKEKDYDRHRSKHKKKH
                     KHRQSSRSRSRSRSRSRHRSERHDRKRDGGGYERSSKSRHNEHYEERERRHR"
     misc_feature    <152..349
                     /gene="LOC108069589"
                     /note="PRP38 family; Region: PRP38; pfam03371"
                     /db_xref="CDD:460901"
     polyA_site      1306
                     /gene="LOC108069589"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtgcgcggcg tcggcgccgg cggcattgtg tccacggcct actgcctgct ctacaagctg
       61 tacacgctgc ggctgacccg gaagcagatc aacgggctgc tcaaccacac agactcggcc
      121 tacatccggg cactaggtag gtgttggctt catgtacttg cgctatacgc aaccgccgag
      181 cgacctatac gactggtatg aggactatct gcaggacgag gaggagatcg acgtgaaggc
      241 gggcggcggc caggtcctaa ccatcggcca gatggtctac cagtttatga ccaagctgga
      301 ctggttctcc acgctctttc cgcgcatccc cgtgccgatt cagaagcaga tcgagaagaa
      361 gatcgagcag tactgcaggg agcagggtct gactgtcaac cagctgagct cgggccgatc
      421 ggcggggggt cagggtgccg gtggaggtgg caccggggcc gctggccagg atgccgacta
      481 ccaggagtac caggatggag gtgcgggcat ggatcgtgga ggaggtcgtg gcggtggaca
      541 tgccgcggcg gcctccaatg cccggccaaa tgcctacccg ccgccgatga actatcgcaa
      601 cgatcacgac gatcgtgact actatgccgc cgcctcgggc tcctcctacg cccggggtcg
      661 cggcggctac gaggactacc caccggcacc actgccgcca cagatgcctt acggttcggg
      721 cggggagcgc gagagggaga gggatcgggt gcgggacaag gagaaggact acgaccgcca
      781 ccgcagcaag cacaagaaga agcacaagca caggcagagc tcgcgcagtc gcagcagaag
      841 ccgcagccgg agtcgccacc gctccgagcg ccacgatcgc aagcgggacg gaggtggcta
      901 cgagcggagc agcaagagcc ggcacaacga acactatgaa gagcgggagc gacgtcatcg
      961 gtgaagaccg attccaacac ccaccaaacg aacccacttc ttaagttgtt ccactactaa
     1021 ctcactttgt ttccgccatc aagctgtacc acctttttac cttttttttt atttgtcaat
     1081 ccccaactct actctttgga agccgcggtc gacagttgcg cttcttactc aggttaaaca
     1141 ctccccgaat gcccccaatt ccccataact aacactaaaa ctagacacaa tcacactcag
     1201 acacagcagc aaggctatat tttgtaattt gtgactacac ttatgctgat aaaatagttt
     1261 ccaagttgtg tttatgcaaa taaagtcaaa aataatttgt ttaaaa