PREDICTED: Drosophila takahashii pre-mRNA-splicing factor 38B

LOCUS       XM_017159724            1747 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108069589), transcript variant X1, mRNA.
ACCESSION   XM_017159724
VERSION     XM_017159724.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017159724.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1747
                     /gene="LOC108069589"
                     /note="pre-mRNA-splicing factor 38B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:108069589"
     CDS             149..1405
                     /gene="LOC108069589"
                     /codon_start=1
                     /product="pre-mRNA-splicing factor 38B isoform X1"
                     /protein_id="XP_017015213.2"
                     /db_xref="GeneID:108069589"
                     /translation="MDEDYSASSSAGGGGGGGGGGKKAGVGKQHNTLPFWGNETSMNL
                     NPLILANIQSSSYFKVHLFKLKTYHEVVDEIYYQVKHMEPWERGSRKTSGQTGMCGGV
                     RGVGAGGIVSTAYCLLYKLYTLRLTRKQINGLLNHTDSAYIRALGFMYLRYTQPPSDL
                     YDWYEDYLQDEEEIDVKAGGGQVLTIGQMVYQFMTKLDWFSTLFPRIPVPIQKQIEKK
                     IEQYCREQGLTVNQLSSGRSAGGQGAGGGGTGAAGQDADYQEYQDGGAGMDRGGGRGG
                     GHAAAASNARPNAYPPPMNYRNDHDDRDYYAAASGSSYARGRGGYEDYPPAPLPPQMP
                     YGSGGERERERDRVRDKEKDYDRHRSKHKKKHKHRQSSRSRSRSRSRSRHRSERHDRK
                     RDGGGYERSSKSRHNEHYEERERRHR"
     misc_feature    245..790
                     /gene="LOC108069589"
                     /note="PRP38 family; Region: PRP38; pfam03371"
                     /db_xref="CDD:460901"
     polyA_site      1747
                     /gene="LOC108069589"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gccgataact aacgcataca catcgccaat ttgggcattt tccttgcatg caaattgcaa
       61 aagtgcgtgc attttccgca ttttcccgcg cgcacaaccc tccggcagcc gtgaaattga
      121 tgcccccagt tgcggacgag cagtaggcat ggacgaggat tattcggcgt catcttcggc
      181 cggcggtggc ggcggcggtg gaggcggtgg aaagaaggcc ggcgtgggca agcagcacaa
      241 cacgctgccc ttctggggca acgagacctc gatgaacctg aatcccctga tcctggccaa
      301 catccagagc tccagctact tcaaagttca cttgttcaag ctgaaaacct accacgaagt
      361 ggtcgacgag atctactacc aggtgaagca catggagccc tgggagcgcg gatcccgcaa
      421 gacgtccggc cagacgggca tgtgcggcgg agtgcgcggc gtcggcgccg gcggcattgt
      481 gtccacggcc tactgcctgc tctacaagct gtacacgctg cggctgaccc ggaagcagat
      541 caacgggctg ctcaaccaca cagactcggc ctacatccgg gcactaggct tcatgtactt
      601 gcgctatacg caaccgccga gcgacctata cgactggtat gaggactatc tgcaggacga
      661 ggaggagatc gacgtgaagg cgggcggcgg ccaggtccta accatcggcc agatggtcta
      721 ccagtttatg accaagctgg actggttctc cacgctcttt ccgcgcatcc ccgtgccgat
      781 tcagaagcag atcgagaaga agatcgagca gtactgcagg gagcagggtc tgactgtcaa
      841 ccagctgagc tcgggccgat cggcgggggg tcagggtgcc ggtggaggtg gcaccggggc
      901 cgctggccag gatgccgact accaggagta ccaggatgga ggtgcgggca tggatcgtgg
      961 aggaggtcgt ggcggtggac atgccgcggc ggcctccaat gcccggccaa atgcctaccc
     1021 gccgccgatg aactatcgca acgatcacga cgatcgtgac tactatgccg ccgcctcggg
     1081 ctcctcctac gcccggggtc gcggcggcta cgaggactac ccaccggcac cactgccgcc
     1141 acagatgcct tacggttcgg gcggggagcg cgagagggag agggatcggg tgcgggacaa
     1201 ggagaaggac tacgaccgcc accgcagcaa gcacaagaag aagcacaagc acaggcagag
     1261 ctcgcgcagt cgcagcagaa gccgcagccg gagtcgccac cgctccgagc gccacgatcg
     1321 caagcgggac ggaggtggct acgagcggag cagcaagagc cggcacaacg aacactatga
     1381 agagcgggag cgacgtcatc ggtgaagacc gattccaaca cccaccaaac gaacccactt
     1441 cttaagttgt tccactacta actcactttg tttccgccat caagctgtac caccttttta
     1501 cctttttttt tatttgtcaa tccccaactc tactctttgg aagccgcggt cgacagttgc
     1561 gcttcttact caggttaaac actccccgaa tgcccccaat tccccataac taacactaaa
     1621 actagacaca atcacactca gacacagcag caaggctata ttttgtaatt tgtgactaca
     1681 cttatgctga taaaatagtt tccaagttgt gtttatgcaa ataaagtcaa aaataatttg
     1741 tttaaaa