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LOCUS XM_017159712 3290 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017159712 VERSION XM_017159712.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017159712.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3290 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3290 /gene="comt" /note="comatose; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108069581" CDS 419..2656 /gene="comt" /codon_start=1 /product="vesicle-fusing ATPase 1" /protein_id="XP_017015201.1" /db_xref="GeneID:108069581" /translation="MAYRLKATKCPTDELSLTNRAIVNVGDFPDEVKYADISPAAGQH FIFALEKTVEVPSGYVGFSLVQRKWAMVSINQELEVRPYRFDASSDVITCVSFETDFL QKKTVSQEPYDSDQMAKEFIMQFAGMALTVGQSLVFNFKDKKLLGLAVKSLEAIDPKS LGEGKEPAMRNVRFGRILGNTVVQFEKAENSSLNLQGKSKGKVVRQSIINPDWDFGKM GIGGLDKEFNSIFRRAFASRVFPPELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTM LNAREPKIVNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAIC KQRGSVAGNSGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQ MEISLPNEQGRVQILNIHTKRMRDFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQS SAMNRLIKADAKVTVDPEAMEKLKVNRDDFMHSLENDIKPAFGTAQEILDNMLARGVI NWGTPVSNLLEDGMLYVQQAKAPESSGLVSVLVAGAPNSGKTALAAQLAKMSDFPFVK VCSPEDMVGYTESAKCLHIRKIFDDAYRSTLSCIVVDNVERLLDYGSIGPRYSNMTLQ ALLVLLKKQPPKGRKLLILCTSSRREVLEEMEMLTAFTSVLHVPNLSQPDHVLAVLEH TDIFSKGEIQAIGKKMAGKRVFIGIKKLLGLIDMARQTEQSQRAIKFLSKMEEEGGLD MVARQ" misc_feature 431..667 /gene="comt" /note="Cell division protein 48 (CDC48) N-terminal domain; Region: CDC48_N; smart01073" /db_xref="CDD:215012" misc_feature 749..>892 /gene="comt" /note="Cell division protein 48 (CDC48) domain 2; Region: CDC48_2; smart01072" /db_xref="CDD:215011" misc_feature 1073..1603 /gene="comt" /note="first of two ATPase domains of NSF and SEC18, and similar ATPase domains; Region: RecA-like_NSF-SEC18_r1-like; cd19504" /db_xref="CDD:410912" misc_feature <1076..>2236 /gene="comt" /note="AAA family ATPase, CDC48 subfamily; Region: CDC48; TIGR01243" /db_xref="CDD:273521" misc_feature order(1079..1081,1208..1222,1400..1402) /gene="comt" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:410912" misc_feature order(1115..1117,1124..1126,1136..1138,1154..1168, 1301..1306,1313..1315,1325..1327,1472..1477,1484..1486, 1496..1501,1574..1576) /gene="comt" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:410912" misc_feature <1994..2524 /gene="comt" /note="AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]; Region: SpoVK; COG0464" /db_xref="CDD:440232" polyA_site 3290 /gene="comt" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaatttaaca ttctgtttat cagatattta tgtgtttgtt tttaattatt tgaattatga 61 tgggtggaaa attaaatttt caaaatgtat cgatatgtaa gttatacttg tatacatttt 121 ctggcgatat acctgcggtc atactttaaa aggcgcgcat gtcccgattg aaaaatataa 181 ctatttatcc ctatttatcc tgaaagttgg gaaaaaaata tattggtagt gctgcttgag 241 aattaactgg aaaatatagt tatgtcaagt cagtgacagg gtgagaaaat catatcaacg 301 gttaattcgc acgtagaact gcgcttattg gccatcgaag gactcccttg gaagataaat 361 atcgattttt gggacgctcg taaggaaccc ctgagaaaaa cccgaagaaa ctgcagaaat 421 ggcttatcgc ttgaaggcca ccaaatgtcc cacggacgag ctttcgctta ccaatcgggc 481 gatagtgaat gtgggtgatt ttccggatga agttaagtat gcggacatat cgcccgccgc 541 cgggcagcac ttcatcttcg ccttggagaa gaccgtcgag gtgcccagcg gctatgtggg 601 cttctccttg gtccagcgca agtgggccat ggtgtccatc aaccaggagc tggaggtgcg 661 tccctatcgc ttcgatgcca gctcggatgt catcacctgt gtgtccttcg agacggactt 721 tctgcagaag aagactgtct cccaggagcc ctatgattcc gatcaaatgg ccaaggagtt 781 catcatgcaa ttcgctggca tggctttgac cgttggccaa tccttagttt tcaacttcaa 841 ggacaagaag ctcctcggcc tggccgtcaa atccctggag gccatcgatc ccaagagcct 901 gggcgagggc aaggagcccg ccatgcggaa cgtacgcttc ggcaggatcc tcggcaacac 961 ggtggttcag ttcgagaagg ccgagaacag ctccctgaat ctgcagggca agagcaaggg 1021 caaggtggtc cgccagtcga tcatcaatcc ggactgggac tttggcaaga tgggcatcgg 1081 tggtttggac aaggagttca actccatatt ccggcgggcc ttcgcctccc gtgtctttcc 1141 gcctgagctc gtcgagcagc tgggctgcaa gcatgtcaaa ggaatcctcc tttatggacc 1201 acccggcacg ggcaagactt tgatggcccg ccagattggc accatgctga atgcccgcga 1261 accgaagatc gtcaacgggc cgcagatcct ggacaagtat gtcggcgagt cggaggccaa 1321 tgtgcggcgc ctgttcgccg aggccgagga ggaggagaag cgtctgggcc cgaacagtgg 1381 tctgcatatc atcatcttcg acgaaatcga tgccatctgc aagcagcgcg gctcggtggc 1441 cggaaatagt ggtgtccacg acaccgtcgt caatcagctg ctgaccaaaa tcgatggcgt 1501 cgatcagctg aacaatatcc tcgtgatcgg catgaccaat cgcagggaca tgatcgatga 1561 ggcgctgctg cgacctggtc gcctcgaagt ccagatggag atcagcctgc cgaatgagca 1621 gggtcgcgtc cagatcctaa atatccacac gaagcgaatg cgcgacttca acaagatcaa 1681 cgacgatgtg gacaacaagg agatcgctgc gctgaccaag aacttcagcg gcgccgagct 1741 ggagggtctg gtgcgtgccg cccagtcgag cgccatgaat cggctgatca aggccgatgc 1801 caaggtgacc gtcgatccgg aggccatgga gaagctaaag gtgaatcgag atgactttat 1861 gcactcgctg gagaacgaca ttaagccggc ctttggcacg gcccaggaga tcctggataa 1921 tatgctggcc cgcggcgtca tcaactgggg cactccggtt agcaatctgc tcgaggacgg 1981 tatgctctat gtgcagcagg ccaaggcgcc ggaatccagt ggcctggtct ccgtcctcgt 2041 cgccggagca cccaactccg gcaagacggc gctggccgcc cagctggcca agatgtcgga 2101 cttcccgttc gtgaaggtct gctcgcccga ggacatggtc ggctacaccg aatcggccaa 2161 gtgcctgcac atccgcaaga tcttcgacga cgcctaccgc tccaccctca gctgcattgt 2221 ggtggacaat gtggagcgtc tgctcgacta cggttcgatt gggccgcgct actccaacat 2281 gacgctgcag gcgctgctgg tgctgctcaa gaaacagccg ccgaagggcc gcaagctgct 2341 catcctctgc acctcgagta ggagggaggt tctcgaggag atggagatgc tgacggcctt 2401 cacctcggtg ctccacgtgc ccaatctctc ccagccggat cacgttttgg ccgtgctcga 2461 gcacacggac atctttagca agggcgagat ccaggcgatt ggcaagaaga tggctggaaa 2521 acgcgtcttc attggcatca agaagctcct ggggctaatc gacatggcac gacagacgga 2581 gcagtcgcag cgggccatca agttcctgtc caagatggag gaggagggcg gcctggacat 2641 ggtggcgcgg cagtgaggga tatgaaactg gatgtgcccg aatgcagtct caattattag 2701 cttctaagtg cataaaaaaa gagagagagg gccggagatg actccgaatc agaagcgttc 2761 cagaactcca tgtacacgta tacaccgcaa acttatacta gtcaaatata tacagaagat 2821 atatatatac atacagatat atgaatatac gatccaggct tcgcgttgtt tgttcggtcc 2881 caaaagccca gttgaaagaa aatccaatcc gcatcccgga ggagtttccc atgttcccga 2941 gttctcgttc gcccccacag agctcaatca aatcagacag atatgtgaga cccgtgacct 3001 gaagaggatg gatagagcat gttaagcata atacagctaa atggacagat actcaattac 3061 atttatagca aaagacacgc gtagctaaat aactcgttaa tagcatgata atctttctcg 3121 ttacctttaa ttttaggatt cgcttcagta cattctcaga gcggcagaaa acaccaatgt 3181 ttgtgaacgt tttcaactaa ttaattgaat atttattaaa tcaaatactg ttaaccgcca 3241 atgttataca tatatcttaa ataaagataa cgatctcaaa ttccatctta