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LOCUS XM_017159702 5186 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017159702 VERSION XM_017159702.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017159702.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5186 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5186 /gene="mew" /note="multiple edematous wings; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108069576" CDS 466..3930 /gene="mew" /codon_start=1 /product="integrin alpha-PS1 isoform X1" /protein_id="XP_017015191.2" /db_xref="GeneID:108069576" /translation="MEESPFRSTLSPFSPRRKLGILLLLQFVICIAGFNLEQRLPIVK YGHPHSNFGYSVATHTIGEVNGPNKTNCVLVGAPLDQNRQPNTSHSGALWRCPMTQSF DDCEQVITDGRRSNGTYETQFNKTFDSEILSPPGNDEIKEDQWMGVTVRSSPLQANGS GGKVVVCAHRYMYIVRENRYGQGLCYLLTNDLQFEEVHEPCKGRPVQRQHEDYGLCQA GTSAALLDDDTMVLGSPGPYTWRGSIWVTQVGGEYLQRDKTTYYSDHSDTSSKVKKYS YLGMSVTGGRFFGQMSYAAGAPRSQGHGQVLIFDKSTNNPIPVHLTLDGEQFGSSFGY ELATADVNGDHRPDLIVAAPLYFTKTEGGAVYVYQNDRDTLPLKHTLKLTGSLESRFG LALANIGDLNKDNCEDLAVGAPYEGNGVVYIYLGSRQGLNSKPAQKIQASELGGTMPT GQPPIRTFGISISGNTDLDDNSYPDVVIGAFNSSAAVILLARPIISIQTNVKRDELRN MDPNKPGCLADRGSNLTCFTFEACCSIDPYDERSKELQLSYSVETETFDQLKKFSRVF FDRDNKRSNVLSRDVRVQTDGRMHCQAITGYIKANTRDIQTPVRFRLKYSLVEPPLAD SALTRLNPILDQTQAHIDFEGTFQKDCGDDDLCESNLVIRAEPNITQSSANEYTLILD ETELEVRINVTNLADSAYEAQLFIVHQAGVSYVATKKPTNATCNSYNTTMVACSLGNP MLRGTTTFVTIRFQPKGLEPSEKSMLFHIFANTTSKLVGRERPERDLLVNVLRRAKLN FRGWAIPEQSFYSGSSVATSAVSTTEVADVEGHGPMGMDDVGSQVHHMYTIFNEGPST APKVKMVIHWPYSLYSDPQSGRPVQYLLYLEQVPTVEVSQGECHVAKEYVNPLNLASG SRESPAAFLTAPAQMRMFPTQSRHSFNKSLIHSQRSYYREEDRSQHRNRVRRNFLERV TRLERLMYDPETSNAAGTGGKKQDIVELDCNKGATNCVRIECEILNMPALSEAQVVVK ARLWNSTLVSEYPRVERVRIFSTATAQIPESYGVEVMEHNNIEVETRAYPELRNQQRD TSIPWLIIILGIVGGLLLLALFTYLLWKCGFFKRIRPTDPTLSGNLEKMNEEKPFLAP AKNSHHGI" misc_feature 607..798 /gene="mew" /note="Integrin alpha (beta-propellor repeats); Region: Int_alpha; smart00191" /db_xref="CDD:214549" misc_feature 1447..1599 /gene="mew" /note="Integrin alpha (beta-propellor repeats); Region: Int_alpha; smart00191" /db_xref="CDD:214549" misc_feature 1630..1782 /gene="mew" /note="Integrin alpha (beta-propellor repeats); Region: Int_alpha; smart00191" /db_xref="CDD:214549" misc_feature 1837..1974 /gene="mew" /note="Integrin alpha (beta-propellor repeats); Region: Int_alpha; smart00191" /db_xref="CDD:214549" misc_feature 1939..3507 /gene="mew" /note="Integrin alpha; Region: Integrin_alpha2; pfam08441" /db_xref="CDD:462478" polyA_site 5186 /gene="mew" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tccgttgtta ttgttagttt tacccgagtc gcttgcgttt cgtttgctac gaagacgaaa 61 acgaaatagt atctgtcgtg ttcggggatt cgattaggaa accacgaatc ttatcaaaat 121 gcgtgtggat tgtgtttacg taatagtata atagtattgt agtaacttta ttattatagc 181 cgtttttttt ttgctgtgag tgcgtgtgaa gagaggaaat cgaaaaacga aaagtaaaag 241 aaaaagaaaa acagcggcga gcggaaaaga gcgtggaaaa tacgctgcga actacctgtt 301 gatcccaaga actcaacgga tttagtgtta tttttttctg tttcggccgt ttgccaaagg 361 tcacggcctg aagaaccacc ccctttgccg tgcccggtgc acgtgcattt aaaattaaaa 421 aatatttaca aaatataaaa tacaaaaaac accaaaacac acatcatgga agagtccccg 481 tttcgctcca cactatcacc tttctccccg cgaagaaagc tggggatttt gttgcttctg 541 caatttgtga tctgtatcgc cggctttaac ctggaacagc gattgccgat cgtgaaatat 601 ggccatccgc actcgaattt cggctactcg gtggccaccc acacaattgg cgaggtcaat 661 gggcccaaca aaacaaattg cgttttagtg ggagctccac tggatcaaaa tcgacagccg 721 aacacctcac attctggcgc cctctggcgg tgtcccatga cacagagttt cgacgactgc 781 gaacaagtga tcaccgatgg caggcgatcg aacggaacat atgagactca atttaataag 841 actttcgata gcgaaatcct ctcaccgccc ggtaatgacg aaatcaagga ggaccaatgg 901 atgggcgtta cggtgcgatc gagtccccta caagccaatg gatccggtgg aaaggtggtc 961 gtatgcgccc atcgctatat gtacatcgtt cgggagaatc gctatggcca aggtctctgc 1021 tatttactta caaacgatct gcagttcgaa gaggtccatg aaccctgcaa aggacgacct 1081 gtacaaagac aacacgagga ctacggactg tgccaggcgg gaacatcggc ggcccttctg 1141 gacgacgaca ccatggtatt gggctccccc ggtccgtaca cgtggcgcgg atccatctgg 1201 gtgacccagg tgggcgggga gtacctgcag cgcgacaaga cgacctacta cagtgatcac 1261 tcggacacca gctcgaaggt gaagaagtac agctacctgg gcatgtcggt gaccggtggc 1321 cgtttctttg gccagatgtc ctatgcggcc ggagctccgc gctcgcaggg ccacggacag 1381 gtgttgattt tcgacaagtc cacgaataac ccaattccgg ttcacttgac cctggacggt 1441 gagcagttcg gctcgagttt cggctacgaa ctggccaccg ccgacgtgaa cggcgatcat 1501 cgaccggacc tgatagtcgc tgccccgctg tacttcacca aaacggaggg cggagcggtg 1561 tacgtttacc agaatgaccg ggacacgttg cccctgaagc atacgctcaa gctgacgggc 1621 agtttggaga gtcgcttcgg tttggccctg gccaatatcg gggatctgaa caaggacaac 1681 tgcgaggatc tggcggtggg agctccgtac gagggcaatg gcgtcgtcta catctacttg 1741 ggctcgcgac agggactcaa ctcgaagccg gcccagaaga tccaggcctc ggagctgggc 1801 ggcaccatgc ccactggcca gccgccgatt cgcaccttcg gcatctcgat atcgggcaac 1861 acggacctcg atgacaactc ctatccggat gtggtgatcg gagcgttcaa ctcctcggcg 1921 gcggtaattc tgctggcccg acccatcatc agcatccaga cgaacgtgaa gcgggacgag 1981 ctgcgcaaca tggatcccaa taaaccgggc tgcctcgccg atcgcggcag caatctcacc 2041 tgcttcacct tcgaggcctg ctgcagcatc gatccgtacg acgagcggag caaggagctc 2101 cagttgtcgt acagcgtcga gacggagacc ttcgatcagc tgaagaagtt ctcgcgcgtc 2161 ttcttcgatc gggacaacaa gcggagcaac gtgctcagtc gcgatgtgag ggtgcagacg 2221 gatggaagga tgcactgcca ggcgattacg ggctacatca aggcgaatac ccgtgacatc 2281 cagacgccgg tgcgcttccg attgaagtac tcgctggtgg aaccgccact ggccgactcc 2341 gccttgacgc gcctcaatcc gatattggac cagacccagg cgcacatcga cttcgagggc 2401 accttccaga aggactgcgg cgatgacgat ctctgcgaga gcaatctggt tatccgggcg 2461 gagccgaaca tcactcagtc ctcggccaac gaatacacct tgatcctgga cgaaacggaa 2521 ctggaggttc gcatcaatgt gaccaatctg gcggactcgg cctacgaagc tcagctgttc 2581 atcgttcatc aggcgggagt ttcctatgtg gccaccaaga agccgacgaa tgccacttgc 2641 aacagctaca acacgaccat ggtggcctgc agcctgggca atcccatgct gcgcggcacc 2701 accacattcg tgaccatacg cttccagcca aagggactgg agccgagcga gaagtccatg 2761 ctgttccaca tctttgccaa taccacctcc aagttggtgg gccgggaacg tcccgaaagg 2821 gatctcctgg tgaatgtgct gcgtcgggcg aagctgaact tccgtggttg ggcgataccc 2881 gagcagagtt tctacagcgg atcgagcgtg gctacctcgg cagttagtac aactgaggtg 2941 gccgatgtcg agggacacgg tcccatggga atggacgacg tgggctcgca ggtccaccac 3001 atgtacacca tcttcaacga gggaccctcg acggcgccga aggtcaagat ggtcatccac 3061 tggccgtact cgctgtacag tgacccgcag agcggtcgac ccgtccagta tctgctctat 3121 ctggagcagg tgcccaccgt ggaggtcagc cagggcgagt gccacgtggc caaggagtat 3181 gtgaatcccc tgaacttggc cagtggctcg cgggagagtc ccgccgcctt cctgactgcc 3241 cccgcccaga tgcgaatgtt ccccacgcag tcgcggcatt cgttcaacaa gagtctgatc 3301 cactcgcaga ggtcctatta tcgcgaggag gatcgttcgc agcatcgcaa tcgagtgcgt 3361 cgcaatttcc tggagcgagt cacccgtctg gagaggctga tgtacgatcc cgagacgagc 3421 aatgcggcgg gcaccggcgg caagaagcag gacatcgtgg agctggactg caacaagggg 3481 gccacgaact gcgttcgcat cgagtgcgag atcctcaata tgcccgccct gtccgaggcc 3541 caggtggtgg tcaaggcccg cctgtggaac tcgacgctgg tcagcgagta tccccgcgtg 3601 gagagggtca ggatcttctc gacggccacg gcccaaatac ccgaaagcta tggcgtcgag 3661 gtgatggagc acaacaacat tgaggtggag acgcgtgcct atccggagct gaggaaccag 3721 cagcgcgaca cctcgatacc ctggctcatc atcatccttg gcatcgtggg cggactgctc 3781 ctcctggcgc tgttcaccta tctgctgtgg aagtgcggct tcttcaagcg catccgaccc 3841 accgatccga cgctcagcgg caatctggag aagatgaacg aggagaagcc ctttttggcg 3901 ccggcgaaga attcgcatca cggtatctaa caagagggca ccgtcggctg ggatttggtg 3961 cgacgtcgga ggcgtcgacg ccgtctgaag ctgtcacttc cgcttccggt tccgcaacga 4021 ccacgtcatg gctggcggaa aaatgcggaa aattcgaaga gtagtagtaa taacaacaac 4081 aagaacaatg acagcgaaat tgacgtgctt tcgctgacgc cgccgccgcc gccgctcagc 4141 atcctcagct ggggaaacga tggctactac caggccagcg ccgcctggtg gggtcaccac 4201 atgtgatcgg agcggggtca ccagtgggtc atgtgggttg tggttcaatg tgccatttcg 4261 tttacttaat gcagcgggct aagttcagtt cagtggatgt ggagaccaga gggaattgac 4321 atcagctaaa tctattataa atgtgtaata aaaaggaaat gggagtatgt acttcagagc 4381 tctcggaggg gctaagtttt taaaaagatt ccacataaaa cctataaaag tctaagtttt 4441 ataaataaat aactatagaa atattccgag cctagataca tccatcctat gaccaaaaac 4501 tattcgatgg tgcttttata acctcgacgg atttagaaga agaacgaaag aatacttaat 4561 atttgtaaag ttttccaaat gtgggatcat aaaagtttat attacgttta tagcgataca 4621 tttagctgat gtcaggtact gagctttagt ctaaagatta cctaagcacc caaacgttga 4681 taatctgtgt aaaaatgttc attgtcatat gtagatttag gcctaagtta ggctaagcta 4741 atgagaacga agcgaaaatt ccgaatatag catacaagaa agaaaaacac tgccaataac 4801 aacaaatcaa aagtgcctcg aaatcgaacc gtaattccaa tgtactggac acgtcttaaa 4861 caaaataaca aaacaacaaa aaaaaacgaa agtattagca caaacataat gcatagctat 4921 aaataatcca caagtaactg aatttagcac acaccggcaa gattatcttt attttgttaa 4981 ttttccgctt tttttcggtc aactaattta agtggggagt ttttatttta aattgtgaaa 5041 aacaccagag atgttagttt ttgtatgtat gtatgtgtgg ggtcgagatc tagttaaatt 5101 agttgtaaat aataattcga tagtactagc tgtaaatagt aattatgttt ctttatctat 5161 ttaatatacg attccttttt tttaaa