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LOCUS XM_017159701 1936 bp mRNA linear INV 09-DEC-2024 (LOC108069575), mRNA. ACCESSION XM_017159701 VERSION XM_017159701.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XM_017159701.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1936 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1936 /gene="LOC108069575" /note="uncharacterized LOC108069575; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108069575" CDS 1..1923 /gene="LOC108069575" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_017015190.2" /db_xref="GeneID:108069575" /translation="MNLFTSSRSLHLLMVLAVILVAPPAEAGLRLRHAPRSATPPAST TPTITSATSAEEAPPQETGEQESAPPLAASQATEPETEVEVTTGKHKRGILHGHAHLH QGQWPARTYAAHYGYSLQLPGGSAFLAAAPPHRHFVKYGHGHGVVKPLTLVSGSGLLP GLAPAPAPAALLPTGLPVGLPAGLPTGLPTGLPVGLPTGLPAGVATALAPPSYVLRPG NALVSSYSVNYPHQHLQKPVVLQSAAVKPLHFHAPPAHAHVHAVQPTYVQAFAPTAPA VPVQPVQPVQPVQPIQPIHPVQHLQPIQPIQPVTHQYQPIQPVQPLQPVTPIQPVQPL QPIQPIQPVQPSVAFGVPAPAAVDLPVIPQFPQQPQFPGVPTFSFQPAQPAVPAQPAV PAQPIPAIPAAPEAPEVPQIPAIPQIPQIPQIPQIPQFPGIPQFPQFPGFPQIPQFPQ APASPSVPSVPAVPTVPSFPSPPTSQFFPAAPQPPLPQQPPTFGQPEAQFPGGIVPLP GSTPVQPESGTGIASPQIPQSPEAENPAEVTPQRPPSQQPWKPVFYQPPTESAPASPT RPSITLLPPYGSSPAEGYLPPVGSQPSALSSSSAGIGSQGGIFDQLSDAELEHIFAQA NLAQQQHHQGHKYHHY" misc_feature <721..>1071 /gene="LOC108069575" /note="Topoisomerase II-associated protein PAT1; Region: PAT1; pfam09770" /db_xref="CDD:401645" misc_feature <898..1722 /gene="LOC108069575" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" ORIGIN 1 atgaatctct ttaccagttc gcggagcctc catcttctga tggtcttggc cgtcatcttg 61 gtcgcccctc cagcggaggc gggcctgcgt ctgcgccacg ccccacgatc ggccacgccc 121 ccggccagca ctacgcccac cattacttcc gcgacctcgg cggaggaggc gccaccgcag 181 gagaccggag aacaggagag tgctcctccg ctggccgcct ctcaggcgac cgaaccggaa 241 acggaagtgg aggtcaccac ggggaagcac aagcggggca ttctgcacgg ccacgcccac 301 ctgcaccagg gccagtggcc cgcccgcacc tatgccgccc actacggcta cagcctccag 361 ctgcccggcg gcagtgcctt cctggccgcc gctcctccgc atcgccactt cgtgaagtac 421 ggacatggtc acggtgtggt gaagccactg accctcgttt ccggttccgg tctgctgcct 481 ggccttgctc cggcccccgc tcccgctgct ctgctgccca ccggtttgcc cgttggattg 541 cccgccggat tgcccactgg attgcccact ggattgcccg ttggtttgcc cactggtctg 601 cccgccggag tggccaccgc cctggccccg ccctcgtatg tcctgcgacc cggcaacgcc 661 ctcgtctcct cgtacagcgt caactatccg caccagcacc tgcagaagcc cgtcgtcctc 721 cagtccgccg ccgtgaagcc gctgcacttc catgctcctc cggcccacgc ccatgtgcac 781 gccgtgcagc caacgtatgt ccaggccttt gctcccactg ctcccgctgt tcctgtccag 841 ccagttcagc ctgttcagcc tgttcagccc atccagccaa ttcatcctgt acaacatctt 901 cagcccattc agccaattca gcccgtgacc catcagtatc agcccatcca accagttcag 961 cccctgcaac cagtcacccc catccaacca gttcagcctc tgcagcccat ccagcccatc 1021 cagcccgtcc agccctcagt ggcctttggg gttccggctc ccgcagctgt ggatctgccc 1081 gtgatccccc agttcccgca gcagccgcag ttccctggag tgcccacctt tagcttccag 1141 cctgcccagc cagcggtgcc cgcgcaaccc gctgtgcccg cccagccgat tccggcgatt 1201 ccggctgctc ccgaagcccc ggaagttccc cagattcctg ccatcccgca gattccacaa 1261 attccccaaa taccccaaat accacagttc cctggaattc cccagttccc tcagttcccc 1321 ggcttcccgc agattcccca gttcccccag gcgccggcca gtccatcggt gccctcagtg 1381 cctgcggtgc caacggttcc ctccttcccc agtccgccca ccagtcagtt cttcccggct 1441 gccccccagc cgccgctgcc ccagcagcca cccacctttg gccagccgga ggcacagttc 1501 cccggcggaa ttgtacccct gccgggatcc acgcccgtgc agccggagtc gggaacgggc 1561 attgcctcgc cgcagattcc ccagtcgccg gaggcggaga atccggcgga ggtgacaccg 1621 caacgaccac cgagccagca gccctggaag ccggtgttct atcaaccacc caccgaatcc 1681 gcgccagcat cgcccactcg tccttcgatc accctgctgc cgccctacgg atcttcgcca 1741 gccgaaggtt acctgccgcc cgtgggatcg cagccatcgg ccctgagttc cagcagtgcc 1801 ggaatcggga gccagggcgg catcttcgac cagctgagcg acgcggagct ggagcacatc 1861 ttcgcccagg ccaatttggc gcagcagcag caccaccagg gccacaaata ccaccactac 1921 tgagctaact aactaa