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LOCUS XM_017159621 1274 bp mRNA linear INV 09-DEC-2024 beta-1-induced transcript 1 protein (LOC108069515), transcript variant X1, mRNA. ACCESSION XM_017159621 VERSION XM_017159621.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017159621.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1274 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1274 /gene="LOC108069515" /note="transforming growth factor beta-1-induced transcript 1 protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108069515" CDS 209..748 /gene="LOC108069515" /codon_start=1 /product="transforming growth factor beta-1-induced transcript 1 protein" /protein_id="XP_017015110.2" /db_xref="GeneID:108069515" /translation="MSEPASVCHKCNEVIEQRIITALGMTWHPEHFACKDCHRPISEA TFNIQADEPVCSDCFVKNYSGTCFGCKKPILERTIKAMEQSWHEECFVCNGPCKKPLV GTSFYERDGHPYCRADFEQLFAARCAGCGQPITENAIVALNAKWHRECFKCKKCGTPI TASSFAVEDNKPLCTACSG" misc_feature 230..385 /gene="LOC108069515" /note="LIM is a small protein-protein interaction domain, containing two zinc fingers; Region: LIM; cl02475" /db_xref="CDD:413332" misc_feature order(230..232,239..241,290..292,299..301,308..310, 317..319,371..373,380..382) /gene="LOC108069515" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:259829" misc_feature 407..565 /gene="LOC108069515" /note="LIM is a small protein-protein interaction domain, containing two zinc fingers; Region: LIM; cl02475" /db_xref="CDD:413332" misc_feature order(407..409,416..418,467..469,476..478,485..487, 497..499,551..553,560..562) /gene="LOC108069515" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:188724" misc_feature 587..730 /gene="LOC108069515" /note="LIM is a small protein-protein interaction domain, containing two zinc fingers; Region: LIM; cl02475" /db_xref="CDD:413332" misc_feature order(587..589,596..598,647..649,656..658,665..667, 674..676,728..730) /gene="LOC108069515" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:188724" polyA_site 1274 /gene="LOC108069515" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tatattcaac actatatatt tacgattcgc gctgtttttt gcccgttttt tttgttattt 61 ttcgcgctct gccaaaagtt tcgcgtgttt tattgccgcc actgcccttt ctatcccggt 121 tttcaactga aatttgtacg ttaccaaact caaaatcaaa cgaaaaagca cttgagcaaa 181 agcagcggca gccaaagcag ctaacaaaat gtccgagccg gcgtccgtct gtcacaagtg 241 caatgaggtc atcgagcagc gcatcatcac ggcgctgggg atgacctggc atccggagca 301 cttcgcctgc aaggactgcc accggcccat ctcggaggcg accttcaaca tccaggcgga 361 cgagcccgtc tgctccgact gcttcgtgaa gaactactcg ggcacctgct tcggctgcaa 421 gaagcccatc ctggagcgca ccatcaaggc catggagcag tcgtggcacg aggagtgctt 481 cgtgtgcaac ggtccctgca agaagccgct ggtgggcacc tccttctacg agcgggacgg 541 ccatccctac tgccgggcgg acttcgagca gctgttcgcc gcccgctgtg ccggctgtgg 601 tcaacccatt acggagaacg cgattgtggc cctgaatgcc aagtggcatc gcgaatgctt 661 caagtgcaag aagtgcggca ctcccattac ggccagctcc tttgccgtgg aggacaacaa 721 gcccctgtgc acggcctgtt ccggctagaa atcgggtcat ccgcaccctt aacaccccgt 781 accattcact ccgatatatc catgtatatt atctattctt atggtatttg tagtaatccc 841 attttgtcga accaatcccc cgagaacaaa gaaagcaaag acgaaggtcg tgaaaatgga 901 aagtggaatg gcagatggaa aatggcaaat ggaaattcca acccactgga ggaaagggga 961 ggagaaatta aattttgttt gatggacagg aacacgagaa gtgcatttgg tgggtggatg 1021 gatgagcgga gtgtggcggg gggaggttgt taatgcttaa aataattgta attctcctta 1081 gctgatatac acatatatat ctctatctct atgtcactct cacccactcc caaactaccc 1141 acaacgatcc tctcttgata ttctcttgat cgttttcgta ctgcacaaag tatctgataa 1201 atggtatata aataaaaaaa ttaatcttga atcattgttg atatctctta caaataaaca 1261 caaaacaaac aaaa