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LOCUS XM_017159620 1277 bp mRNA linear INV 09-DEC-2024 beta-1-induced transcript 1 protein (LOC108069515), transcript variant X2, mRNA. ACCESSION XM_017159620 VERSION XM_017159620.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017159620.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1277 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1277 /gene="LOC108069515" /note="transforming growth factor beta-1-induced transcript 1 protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108069515" CDS 212..751 /gene="LOC108069515" /codon_start=1 /product="transforming growth factor beta-1-induced transcript 1 protein" /protein_id="XP_017015109.2" /db_xref="GeneID:108069515" /translation="MSEPASVCHKCNEVIEQRIITALGMTWHPEHFACKDCHRPISEA TFNIQADEPVCSDCFVKNYSGTCFGCKKPILERTIKAMEQSWHEECFVCNGPCKKPLV GTSFYERDGHPYCRADFEQLFAARCAGCGQPITENAIVALNAKWHRECFKCKKCGTPI TASSFAVEDNKPLCTACSG" misc_feature 233..388 /gene="LOC108069515" /note="LIM is a small protein-protein interaction domain, containing two zinc fingers; Region: LIM; cl02475" /db_xref="CDD:413332" misc_feature order(233..235,242..244,293..295,302..304,311..313, 320..322,374..376,383..385) /gene="LOC108069515" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:259829" misc_feature 410..568 /gene="LOC108069515" /note="LIM is a small protein-protein interaction domain, containing two zinc fingers; Region: LIM; cl02475" /db_xref="CDD:413332" misc_feature order(410..412,419..421,470..472,479..481,488..490, 500..502,554..556,563..565) /gene="LOC108069515" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:188724" misc_feature 590..733 /gene="LOC108069515" /note="LIM is a small protein-protein interaction domain, containing two zinc fingers; Region: LIM; cl02475" /db_xref="CDD:413332" misc_feature order(590..592,599..601,650..652,659..661,668..670, 677..679,731..733) /gene="LOC108069515" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:188724" polyA_site 1277 /gene="LOC108069515" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgatccgata tattcaacac tatatattta cgattcgcgc tgttttttgc ccgttttttt 61 tgttattttt cgcgctctgc caaaagtttc gcgtgtttta ttgccgccac tgccctttct 121 atcccggttt tcaactgaaa tttttaccaa actcaaaatc aaacgaaaaa gcacttgagc 181 aaaagcagcg gcagccaaag cagctaacaa aatgtccgag ccggcgtccg tctgtcacaa 241 gtgcaatgag gtcatcgagc agcgcatcat cacggcgctg gggatgacct ggcatccgga 301 gcacttcgcc tgcaaggact gccaccggcc catctcggag gcgaccttca acatccaggc 361 ggacgagccc gtctgctccg actgcttcgt gaagaactac tcgggcacct gcttcggctg 421 caagaagccc atcctggagc gcaccatcaa ggccatggag cagtcgtggc acgaggagtg 481 cttcgtgtgc aacggtccct gcaagaagcc gctggtgggc acctccttct acgagcggga 541 cggccatccc tactgccggg cggacttcga gcagctgttc gccgcccgct gtgccggctg 601 tggtcaaccc attacggaga acgcgattgt ggccctgaat gccaagtggc atcgcgaatg 661 cttcaagtgc aagaagtgcg gcactcccat tacggccagc tcctttgccg tggaggacaa 721 caagcccctg tgcacggcct gttccggcta gaaatcgggt catccgcacc cttaacaccc 781 cgtaccattc actccgatat atccatgtat attatctatt cttatggtat ttgtagtaat 841 cccattttgt cgaaccaatc ccccgagaac aaagaaagca aagacgaagg tcgtgaaaat 901 ggaaagtgga atggcagatg gaaaatggca aatggaaatt ccaacccact ggaggaaagg 961 ggaggagaaa ttaaattttg tttgatggac aggaacacga gaagtgcatt tggtgggtgg 1021 atggatgagc ggagtgtggc ggggggaggt tgttaatgct taaaataatt gtaattctcc 1081 ttagctgata tacacatata tatctctatc tctatgtcac tctcacccac tcccaaacta 1141 cccacaacga tcctctcttg atattctctt gatcgttttc gtactgcaca aagtatctga 1201 taaatggtat ataaataaaa aaattaatct tgaatcattg ttgatatctc ttacaaataa 1261 acacaaaaca aacaaaa