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LOCUS XM_017158346 1872 bp mRNA linear INV 09-DEC-2024 domain-containing protein 31 (LOC108068655), mRNA. ACCESSION XM_017158346 VERSION XM_017158346.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017158346.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1872 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1872 /gene="LOC108068655" /note="zinc finger and SCAN domain-containing protein 31; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108068655" CDS 75..1583 /gene="LOC108068655" /codon_start=1 /product="zinc finger and SCAN domain-containing protein 31" /protein_id="XP_017013835.2" /db_xref="GeneID:108068655" /translation="MSNNLEPRVVDLGVACLVCLMEEPESSSIYTHDPESPHMLILDK IRCCTGLQLEGSPSQLQSWPDKICKQCYLELSVSYRFHEKCAAVQKLFHTASSASSSS SSQLLEQPQLKLDQLRLPATLKIKRLDLEPESQFYQDVVEEEESLLPEGAMVLSLNEL QEQQQQQEQDPIRQQEETEEEEEDQELAVDPWEEENEEDNTPEHLYEIETPLMEESLP DSPPLPSPPQLKKRSSVATKKAANPDEDYKPAAGNKRRHERSPKICDVCGNTYKYQHA LNAHMRRHNNERPFPCEVCQKAFISNVELRRHMRVHTGQKPYSCRYCERRFSDFGSSK KHERIHTGERPYVCEVCHKGFAYAHVLSVHRRTHTGKKQFQCGQCDKGFTKKSYLAAH MEQHRGSGAAGLPGNRRDVERKAQVPQEKFALDSAVVLEQTKVLEECIVANDFMFHEE EEENPEEEHEEPYPEPDFDDVDGYQSVRSVKELVGDLLDTEEFVDDSKYMID" misc_feature 120..356 /gene="LOC108068655" /note="Zinc-finger associated domain (zf-AD); Region: zf-AD; pfam07776" /db_xref="CDD:462262" misc_feature <834..1262 /gene="LOC108068655" /note="FOG: Zn-finger [General function prediction only]; Region: COG5048" /db_xref="CDD:227381" misc_feature 864..926 /gene="LOC108068655" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 948..1010 /gene="LOC108068655" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(963..965,969..971,975..977,981..986,993..998, 1005..1007,1047..1049,1053..1055,1065..1070,1077..1082, 1089..1091,1131..1133,1137..1139,1143..1145,1149..1154, 1161..1166,1173..1175) /gene="LOC108068655" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1032..1094 /gene="LOC108068655" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1116..1178 /gene="LOC108068655" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1200..1262 /gene="LOC108068655" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" polyA_site 1872 /gene="LOC108068655" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agttgtgttt tatttttttt gtgcctacgc ttgtgaggat ttctggattc gattccccag 61 ccaaaagcag gaagatgtcc aacaacctgg agccgcgggt ggtggacctg ggcgtggcct 121 gcctggtctg cctgatggag gagcccgaat ccagttcgat ttacacccat gaccccgagt 181 cgccgcacat gctcattctg gacaagattc gctgctgcac gggtctccag ctggagggca 241 gcccgtcgca gctgcagagc tggccggaca agatctgcaa gcagtgctac ctggagcttt 301 ccgtctccta tcgtttccac gagaagtgcg ccgccgtcca gaagcttttc cacacggcca 361 gcagcgcatc ctcctcctcc tcctcgcagc tcctggagca gccacagctc aaactggacc 421 agctgcgcct gccggccacc ctgaagatca agcggctgga cctggagccc gagtcgcagt 481 tctaccagga cgtcgtcgag gaggaggagt cgctgctgcc ggagggagcc atggttttgt 541 ccctcaacga actgcaggag cagcagcagc agcaggagca ggatcccatc aggcagcagg 601 aggaaaccga ggaggaggag gaggatcagg agctggctgt ggatccctgg gaggaagaga 661 acgaggagga caacactcca gagcatctgt acgagattga gacgccgctg atggaggaat 721 cccttccgga tagcccgcca ttgccgtcgc cgccgcagct aaagaaacgc tcctccgtgg 781 ccaccaaaaa ggcggccaat cctgacgagg attacaagcc cgctgccgga aacaaacgcc 841 gccacgagcg ctcgccgaag atctgcgatg tgtgcggcaa tacgtacaag taccagcacg 901 ctttgaacgc ccacatgcgg cggcacaaca acgagcgtcc gtttccctgc gaggtatgcc 961 aaaaggcatt tatctcgaac gtcgagctgc gccgccacat gcgcgtccat acgggccaga 1021 agccctacag ctgccgctac tgcgagcggc gattctcgga cttcgggagc agcaagaagc 1081 acgagaggat ccacaccggc gagcggccat atgtgtgcga ggtgtgccac aagggattcg 1141 cctatgctca tgtgctgtcc gtccaccggc ggacgcacac gggcaagaag cagttccagt 1201 gcggccagtg cgacaaggga ttcaccaaga agagctacct tgcggcgcac atggagcagc 1261 acaggggatc gggggctgct ggtctgcccg ggaatcgcag ggacgtcgag cgcaaggccc 1321 aagttcccca agagaaattc gctttggatt ccgccgtggt gctcgagcag acgaaagtgc 1381 tggaggagtg catcgtggcc aacgacttta tgttccacga ggaggaggag gagaatcccg 1441 aggaggagca cgaggagccc tatccggagc cggacttcga cgacgtcgat ggctatcaga 1501 gcgtgcgatc ggtcaaggag ctcgtcggcg atctgctcga caccgaggag tttgtcgacg 1561 actccaaata catgatagac tagttgctag tattgcccat ttatattaca aaggccccca 1621 gaaattcccc accttcccgt agtctttagt cagccatgta agaaatcggt gtaaataaag 1681 cgaaacgata ttcagagatg caagttaata tgtaggattt actggatgtc taggagatat 1741 aatattacta atggaaaata attcaatagc ctcggataac tgaatattat ctttgtaaat 1801 ttgctttcca acaatgtttt tctagctatt tattagaaca aataaatatc tcgagtattt 1861 tactatttta aa