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LOCUS XM_017158324 3695 bp mRNA linear INV 09-DEC-2024 (LOC108068637), mRNA. ACCESSION XM_017158324 VERSION XM_017158324.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017158324.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3695 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3695 /gene="LOC108068637" /note="trithorax group protein osa; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108068637" CDS 310..2715 /gene="LOC108068637" /codon_start=1 /product="trithorax group protein osa" /protein_id="XP_017013813.2" /db_xref="GeneID:108068637" /translation="MSAVYSPQPPQQQQQQLQQQQQQPQQQPPPPQQQSQQQQQPQQQ QSQQQQLQQPPPNTAPNQQPPGSGVGPGGGGGGGGGVLPMNMQQRPPMGVPGSPGGLM VTPPTTPRGGGGGALQPQVNSAQIQKMLDENCGLIQTIQDFQSMGKAQECMSYHVALH RNLVYLAQLADPAMNISQILPPPHILQTQAMQQGGQQTPPSGPHPQMGMQQHGGEPPY GAQQPQQQQHPNPGLPPGAQQQSQQQQQQAQQQAAAQQQAAQQQAAAAAAAAAAVVNQ QQGPQVSQANPQQQQQQHPVYRNAQGQGQPGGNQPPGQSVINPNAAPNQQRPNNGPLN AGQQNPQQPQQQQPPNQQQQPGAQPQVGAGVPPPQSPYRVSYQQQQQQQHGHYPGYPP QSQYQPQGAYPYGPPAQGYGPPPPGPPNAAQGGYHHGPAGAATGAAGHGYQPNAAPGA YPPPPNSQQVPPVPGQPGQQPPPGPPPGQPPTGGQQQQQPGGPPGPPQSQYGPPPPQN SGYPGYPPNPGQYGQAGAGGGPPPSGYWPPPPPTSSGQSPYQAYQQQQQQPASGAAPP APPGGGYSSTAPSQTPPPQGGSAAGGGNSNPNGPNAQQSTPPPPQGGGASGAGTGGAN QQYAGQQPPPGVVVSGVAPLPTQVQPTYSTPGNYNQQPGAPPPPNQQPQQPPPSAGGS AAGGGAPPNAQGQGSQQQAPPNGATPPMPNQYQPAPGAPPYPPPPQGYGPPPPGSAYP GHAYHQPPPQAPGGYAQYPPPAQGYQGYRPAAGAQMPPPGAPPQGPPPTGAYGYYGQQ PPQ" misc_feature 664..843 /gene="LOC108068637" /note="SSXT protein (N-terminal region); Region: SSXT; pfam05030" /db_xref="CDD:428268" polyA_site 3695 /gene="LOC108068637" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgccgccgta gcagcagtga aagccagaaa aagtaccagt ggattttcta caaagccggc 61 gtttgtttta ccttcgccgc aagcaaatag aaaaaacctt tcctcatctt tttacctctg 121 tgtgtgtgtg ccgtgtgctt gtccccgtgt ctgtgtattt gtgtgtgtcg gccagcgcgt 181 gtgtgtatgt gaagaaaacg ccgcacactg cgaaaatttt cctttcccca acggtcgaga 241 ataaccgcta aaattgtgga aaaacaggag aaaaccccca agcggaagaa gaagactgca 301 gccagtaaaa tgtctgcagt ttactcgccg caaccgccgc agcagcaaca gcagcagttg 361 cagcagcagc agcagcagcc gcaacagcag cctcccccgc cacaacaaca gtcgcaacag 421 cagcagcagc cgcaacagca gcagtcgcaa cagcagcaat tgcaacagcc gcctcccaat 481 acggcgccca atcagcagcc tcctggctcg ggggtgggtc cagggggagg gggaggagga 541 ggagggggtg tcctgcccat gaacatgcaa cagcgaccgc cgatgggcgt tcccggttcg 601 ccaggcggcc taatggtcac cccacccacc acgccacgcg gcggaggagg aggtgccctc 661 cagccgcagg tcaactccgc tcagatccaa aagatgctcg acgagaactg cggactcatc 721 cagacgatcc aggactttca gagcatggga aaggcgcagg agtgcatgtc ctaccacgtc 781 gccctgcatc gcaatctggt ttatctggcc cagctggccg atcccgccat gaatatctcg 841 cagatactgc cgccaccgca catcctccag acgcaggcca tgcagcaggg cggccagcag 901 acgcctccca gtggaccgca tccccagatg ggcatgcagc agcatggcgg cgaaccgccc 961 tacggcgccc agcagccgca gcagcagcag catcccaatc ccggcctgcc gccaggagca 1021 caacagcaat ctcagcagca gcagcagcag gcgcaacagc aagcggcggc gcaacagcag 1081 gcggcgcaac agcaggccgc agcagcagcg gcggcagcag ctgcggtagt taatcaacag 1141 cagggaccgc aggtcagcca ggcgaatccg cagcagcagc agcagcagca tcctgtttat 1201 aggaacgccc agggacaggg acaacctgga ggcaaccagc cacctggtca gtccgtcatc 1261 aatccgaatg cagcgcccaa tcagcagcgt cccaacaatg gacctctaaa tgcgggacaa 1321 cagaatcccc agcagccgca gcagcagcag ccgcccaatc agcagcagca accaggagct 1381 caaccccaag tgggagcagg tgttcctcct ccacagagtc cctaccgcgt gagctaccag 1441 cagcagcagc agcagcagca tggccactat cccggctatc cgccgcagtc gcagtaccag 1501 ccgcagggcg cctatcccta cggaccgccc gcccagggct acggaccgcc gcctccgggg 1561 ccgccgaatg ccgcccaggg tggctatcat catggtcccg ccggagcggc gacgggagcc 1621 gctggtcatg gctatcagcc gaatgccgcg ccgggcgcct atccgccgcc accgaacagc 1681 cagcaggtgc cgccggttcc gggacagccg ggacaacagc cgccgccggg acctccacct 1741 ggtcagccgc ccaccggcgg acagcagcag cagcagccgg gtgggccacc gggtcctccg 1801 caaagtcagt acggtccgcc gccgccgcag aactccggct atccgggcta tccgcccaat 1861 cccggccagt atggtcaggc gggagcaggc ggaggacccc cgcccagtgg ctactggcca 1921 ccgccgccgc ccacgagcag cggccagagt ccctaccagg cgtatcagca gcagcagcag 1981 cagcccgcca gcggagcagc gccgccagcg ccgccgggag gaggctacag cagcacggcg 2041 cccagtcaga cgcctccgcc gcaaggagga agtgcagcag gcggtggcaa ctcgaatccc 2101 aatggaccca atgcacagca atccacgccg ccgcctcccc aaggaggagg agcaagtgga 2161 gcaggaactg gaggagccaa ccagcaatat gcgggacagc aaccaccacc aggcgtcgtg 2221 gtttccggcg tggcgccgct gcccacgcag gtgcagccca cgtactcgac cccaggcaac 2281 tacaatcagc agccaggagc tcctccgccg cccaatcaac agccacagca gccgcctccc 2341 tccgctggag gatcagccgc cggcggagga gcaccgccga atgcccaggg tcaaggcagc 2401 cagcagcagg cgccgccgaa tggagcgaca ccgccgatgc cgaatcaata ccagccggcg 2461 ccaggagctc ctccttatcc gccaccgccg cagggctacg gaccaccgcc gccgggaagc 2521 gcttatcccg gccacgccta ccatcagccg cctccccagg cgcccggcgg ctatgcacag 2581 tacccgccgc cggcgcaggg ctaccagggc tatcggccag ccgccggggc acagatgccg 2641 ccgccaggag caccgccgca gggaccgccg cccaccgggg catacggcta ctacggccag 2701 cagccgccgc aatgaggaag ggacagccta ttgccgccgc tgccgcctgg ctgtctgcac 2761 aacaagtagg aggataagca gcgggggtaa taggacaact ggatgaagga ggaggaggag 2821 gagaaggagg attacgagga gcggatggag ataaactagg cttatatact aagaattgta 2881 tcggaagagg actaactacg attagaagaa agtgaggagt aggcttaaga ctaaaagaac 2941 gcaatgaaga tgaagatgaa gatcaagatg cagaagaagt tggaaaagga aaagcatatt 3001 tagcagtaaa tctagattcc agattctaga ttccagaaca agaagagcac aaacacaaag 3061 tgtagaagtc cgtggagaag aaaaagttaa gattaagtaa gcagaaaaac atgcgcaagc 3121 gaacaagaaa ccccaaaaac cagacaaaaa gggtgggtcg atttctaggg attttattta 3181 aagcttttaa agcgaaaacg aagggcaaaa ctttgtattt tgatccataa ttgaagggtc 3241 tttatagaac cacccaagtt tctattaatt attattttta atcttcagca atcgacccat 3301 cctattaaat acaatagttt tctctcttaa gtaacttccg ctcctcttta aaaaacgatt 3361 attctaaact atacatacat ttatatacat atataaactt aagccagatg acgatggagc 3421 cacagaatag tgcatgttta cccgctaact atttttatat atttttttgt actcttgtag 3481 atgtctgttt tcaacgtcca tgcatttttt ttatgtctag caattttata tattaattat 3541 ccttggtccc ccgtgttttt ttgccccaaa agattgtaat ttgtaaaatc ccctcacata 3601 tttatatgat aagcttaaat ttactattta aagtaaaaat aaaaactata aatagcaaga 3661 ggaaatcatg aataaaccct acatttaaaa taata