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LOCUS XM_017158311 3740 bp mRNA linear INV 09-DEC-2024 (Dlic), transcript variant X7, mRNA. ACCESSION XM_017158311 VERSION XM_017158311.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017158311.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3740 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3740 /gene="Dlic" /note="dynein light intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108068630" CDS 315..1802 /gene="Dlic" /codon_start=1 /product="cytoplasmic dynein 1 light intermediate chain 1 isoform X2" /protein_id="XP_017013800.1" /db_xref="GeneID:108068630" /translation="MALDSGTQTNALTSSFTTKKKDAAAEKENLWSAILNEVQTQGST KLPSNKSVLVLGDNATGKTTLIAKLQGVEDPKKGSGLEYAYIDVKDEYRDDMTRLGVW VLDGDPGHTNLLHYALNETNYAHTLVILTVSMTQPWGWLEQLNHWIKVLGQHIESLQL EAKEKEAARQRLATTWQSYCEVGDDLDPGSPVKRTMRNNSIDEDDLLPLTEDALITNL GLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRNFCLRHGTSLFYTSVKEDKNCD LLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLKKISILYENMHGVKAENPYTDI IKSPPTRKAVSNREAEVQTEDEQAFLARQQEILKQGDQVRGESPLRSQGVGSNKSGPR TPGTTGQSSPKKIDPKLTPATPGAEGVLANFFNSLLHKKSGSPAGGGPGGAGSPAGPG GRTANGGTDAMMTPEKLAVRTDAAAELDRLSRSVKKEIDMSQSEC" misc_feature 387..1787 /gene="Dlic" /note="Dynein light intermediate chain (DLIC); Region: DLIC; pfam05783" /db_xref="CDD:368612" polyA_site 3740 /gene="Dlic" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccatcgctgc tccaccacta ccgcacggtc acactgctcc tgtcgtacaa aatatttttt 61 cccagcgaaa aaactgaatt tcctcgctcg cgttgatatt tttttgttat tttttgtcgg 121 ccacaattgg agcgatcgaa aggaggccca gcggacgtgc gtgaaaatcc agggccgcga 181 gttttcaccg gagagcgaag agcgtgagaa actgccgcag cacatcccga ttcccaattg 241 gacccgagca ggagtggaga gcgttccaat aggagtactg cagcagcaac aacaacaaca 301 acaacaacaa caacatggca ctggacagtg ggacgcaaac gaatgcgctg acatcatcct 361 tcaccaccaa gaaaaaggat gcggccgcgg aaaaggagaa cctatggtcg gcgatattga 421 atgaagtaca aacacagggc agcacaaaac ttccatcaaa caaatctgta ctagtattag 481 gcgacaatgc caccggaaag accacactca tagccaaact gcagggcgtc gaggatccga 541 agaagggttc cggcctggag tatgcctaca tcgatgtgaa ggacgagtac agagacgaca 601 tgacgcgttt gggcgtttgg gtcctggacg gcgatccagg acacacaaac ctgctgcact 661 atgcgctcaa tgaaacgaac tatgcacaca ccctcgtcat cctcaccgtt tcgatgacgc 721 agccgtgggg ctggctggag cagctgaatc actggatcaa ggtactcggc cagcacatcg 781 agagcctgca gctggaggcc aaagagaagg aggcggcccg ccagcggctg gccaccacgt 841 ggcagagcta ctgcgaggtg ggcgacgacc tggatccggg ctccccggtc aagcggacga 901 tgcgcaacaa ctcgatcgac gaggacgacc tgctgccgct gacggaggac gcactaatta 961 caaatctggg cctggacatc gtggtggtgg tcacaaagac ggactacatg accactttgg 1021 agaaggagta cgagtatcgc gacgagcact tcgacttcat ccagcagtgg atacgcaact 1081 tctgcctgcg gcacggcacc tcgctcttct acacgagcgt caaagaagac aaaaactgtg 1141 atctcctcta caaatatctg acgcatcgaa tttatggtct gccattccgt acgccagcgc 1201 tagtcgttga gaaggatgcg gtactcattc cggctggctg ggatagcctg aaaaagatta 1261 gtattctgta cgagaacatg cacggagtca aggccgagaa tccctacaca gacatcatca 1321 aatcgccgcc aactagaaag gcggtttcca atcgcgaggc agaagtgcag acggaggacg 1381 agcaggcctt cctggctcgc cagcaggaga tcctcaagca gggcgaccag gtgcgcgggg 1441 aatcgccgct gcgatcgcag ggcgtgggca gcaacaagag cggaccccga acgcccggca 1501 ccacgggaca gagttcgccc aagaagattg atcccaaact gacgccagcc acgcccggcg 1561 ccgagggcgt tctggccaac ttcttcaact cgctgctaca caaaaagtcc ggcagtccgg 1621 cgggcggcgg ccccggcgga gctggcagtc cggcgggacc gggaggccgc acggccaacg 1681 gcggaacgga tgcaatgatg acgcccgaga agctggccgt gcgcacggat gcggccgccg 1741 agctggatcg attgtcgcgc agcgtgaaga aggagatcga catgtcgcag agtgagtgtt 1801 gagccgtagt cagcagtcag cagccacaca gacaccacag cgaaacacca gcggcggcgg 1861 cagcagcagc aacaacagaa ccagaacatc atgaaaacgt tatttaagca tcaagcgaag 1921 ggcagggact cgtagagaac gcaggaccag tgggagacca caatttggag cagctgtggg 1981 atcattcaat ggtctgcaag ttgctgtgca ggctaatatc agtttttatc aggggcatta 2041 gtatttataa ggagaaggaa gctcttgaat tgttaggcca gaaatgcgat tatttaccaa 2101 gagaactttt gtaaatgatt caaatccccg ttgagcttag aaattccatt ttccagcgcc 2161 cccaaaaact gttcaaggcc cagagatttt tcataaactt ctaaaatctt cctggaactc 2221 atgtgatgag ttctttttac gagcctcctg cggcatactc aaaaactttc gataggaaat 2281 gaaacaaaag gaaaacaaaa cgaaaacgaa aactagaaat gagaaatgat aaatgataaa 2341 gagacattcg ccacttaatg gcttagctta gcaaaaaggt tttctatttg aggaaaagat 2401 ctgcgaggca tactgtactc ctctccctgc gcagctgcat gtgtgtaaag ggtcctggcg 2461 agcgagagga taataaggat aaggataatg tgaagtagct tctttttttt tttcgttcgc 2521 gggtccacag acacatttgt ataataaatt atttaaagcg ccgtaaagtg taattaacaa 2581 acggcaggca aacgagagat tcaaacagtc caagctcccc gcaatgagga tggtattcgc 2641 ctagcttgta tgtacttttt aattatatta attaactaca cacccactca cacttgtgtt 2701 gattcggcag gcgaaacgtt tatattagta tttatgccgg gagaaatcga ggagctccct 2761 tgtcgtgtgt tcatttttag ttaacccacg atttgcgttt tttgcttttg ttcaccaacc 2821 aaccaaccaa ccaaccaacg aaacccattg taattaattt taaatcctaa tcccctcgat 2881 tttaatgtag acctccgtcg ttatccgctc aagaaacgag acagctgtac gtctccattt 2941 taaaggaagt ttttatttaa gccattttaa taccgagcgt gtctgaatca agaaatcaag 3001 ataatagagc tgttcggccc aggcgattta tattctattt tattatgatt tattcgaatc 3061 gagaagacgc tttctttttg ccatatgtat tccaccaaat gtatgtatgc tcttctcatc 3121 gggagattta atttccacag ctttcttaaa cccctaatct atttcttttc tttctgtccc 3181 actctttgcc tctcgctctt tgccgtgtgt cgtcagaagc aaccacaaaa atttgataaa 3241 ccagaaaata aaaacgaaaa attaaaatgt gctacagaaa ctatttttat gtataaatac 3301 aaaataatta tatgaaatat attgtataac attatatata tatttaaatc agagcaaatt 3361 aaaaatattg tgcaagcgaa ttatttaaac aaattgatcg gtattcgaaa actcccaaca 3421 aagaacaaag ctgaaaaaca cacacaaata taaattaatg taaattaaaa cccaaaaaaa 3481 tataggcatc aaatcagcgt caaaaactgc aacaaaaaag tgaaataatt taaataaaat 3541 tttccaaaaa cacaaaaaaa attaaattac tgaaacagtt gttttatttt gaagggggat 3601 tggattagaa ataactgaag tttaaatttt tcaacgaaat tgtttgttta aatttaattt 3661 cattctttcg gaaaacataa aaaaaaaaaa attaagtcag aaattgacgg ggattaactt 3721 attagtttag ctgtgaaaaa