Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Drosophila takahashii DNL-type zinc finger protein


LOCUS       XM_017158309            1068 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108068629), mRNA.
ACCESSION   XM_017158309
VERSION     XM_017158309.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017158309.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1068
                     /gene="LOC108068629"
                     /note="DNL-type zinc finger protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108068629"
     CDS             197..775
                     /gene="LOC108068629"
                     /codon_start=1
                     /product="DNL-type zinc finger protein"
                     /protein_id="XP_017013798.1"
                     /db_xref="GeneID:108068629"
                     /translation="MNALRNIFTSRTLNYLRQNGQNAILNATQQQQAVDAVPLGADPD
                     QQLKATRPAPLSIPRSILDACQFTAKPFDLGRTASGSQAGNGSLSPTTLKRFGRMQRR
                     MELVYRCKLCNTRNTKTISEEAFYSGVVILQCDGCAVDHLIKDNLGLFTGSDGDSSIS
                     SGISTSKNIDQVLADRHARVRVIKVNEHGELI"
     misc_feature    506..>646
                     /gene="LOC108068629"
                     /note="DNL zinc finger; Region: zf-DNL; pfam05180"
                     /db_xref="CDD:461571"
     polyA_site      1068
                     /gene="LOC108068629"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacagcgccg ataacgatag cctacagctg attgccttgc tcccattcac gcaatttctt
       61 ccccgtttgg gggaaaacaa acgcagtaac tacccaactt tcggcacgtg cggcgccaga
      121 acccaggacg cagtgcagca ggcgataaga gcaggaagca acctgcaagt gcaacacaga
      181 ctgatagcga cgtacaatga acgcattgcg caacatcttc acatcgcgaa cgctcaacta
      241 tttgcggcag aatggccaga acgcgatcct caacgccacc cagcagcagc aggcggtgga
      301 cgcggtgccg ctgggcgcgg atcccgacca gcagctgaag gcgacgcgtc ccgctccgct
      361 ctccataccg cgctccatcc tggatgcctg ccaattcacg gccaagccct ttgacctggg
      421 acgcactgcg tcgggcagcc aggccgggaa tggctccctg tcgccgacga cgctgaagcg
      481 cttcggccgc atgcagcgcc gcatggagct cgtgtaccgc tgcaagctgt gcaacacccg
      541 caacacgaag accatcagcg aggaggcctt ctacagcggc gtggtgatcc tgcagtgcga
      601 cggctgtgcc gtcgaccatc tcatcaagga caacctcggt ctcttcaccg gcagcgacgg
      661 cgacagcagc atcagttcgg gcatcagcac cagcaagaac atcgaccagg tgctggccga
      721 tcgccatgcc cgcgtccggg tgatcaaggt gaacgagcac ggcgagctca tctaggaacg
      781 ctagtcaagg gggcatcagt acacagtaca cacaggccag gagaacctgg tgtcgtcaac
      841 ctgcgaatcg tgtccgagga ggacacactc ggcatggggg ggcacattga acccagcacc
      901 caaatgcacc cagttacaaa ccggaatccc agaataccgg aatccctcaa tctgttccga
      961 cctcagccgg ctgtaaataa taattttact gtaattgttg attgtttcgg gccgtgagta
     1021 atgcctaaaa agtgattaaa agaacgtcca gttcgaaatc taaaaaca