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LOCUS XM_017158308 3365 bp mRNA linear INV 09-DEC-2024 (LOC108068628), mRNA. ACCESSION XM_017158308 VERSION XM_017158308.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017158308.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3365 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3365 /gene="LOC108068628" /note="uncharacterized LOC108068628; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068628" CDS 192..2357 /gene="LOC108068628" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_017013797.2" /db_xref="GeneID:108068628" /translation="MSVLAYPRTNDEEVFRHCTKDCGVVTATEDFQYFALRCIFCSEK FLYFDSFIGHMQTAHLGDQSVANPGDPMSLSSRNGDLPSFHEIEDLTDADTALLEPQM VIKQELQELPCSDDEVAADEEEEDLRDSEDAGEDDDETILPENDAPVVSSKPRPRKKV TKQRQRDISSEALEDSSLDDYGDPENSYMDDNSGEYMDYSGFGPESDFLSYDEMVEES LLGRDREVTMHIKDRKMIQFLIHSYQRNPFLWDHGNAQFRDRVKRARFLDWIVLEFKS RFNISLAKDAITRKWDNLRTVYKRECNRMALEKTNISTLWYFKELHFLNEVYSYNDKM SDAVVKETSYRRRFSAIWNDTSTAKLLSMVKRYQCFYNRFDPDYRSKERRGEGLHQMA VELQQLIDVTTIQISKRISQLRFDYSRQKMERLNCERLGKKFIANYTYYDQMHFMDDD IPPFKCPHCPEIMQTLRELDLHMLTHQPSLGGGYFCNICSIQFPNAEEFDSHKQLHLG GVAEVKFNCELCTASFREKANYEEHLRRHNEELFLPSLALNHSIMEGGAEDDEESGGS GQRRRKTKASKSPEDAADDEDPIAKPYGCDVCRRSFATPGHLNAHRIVHQDERERCYK CDYPQCNKSFVARNSLFEHLKQHYSNEEFKCDICGKTFKSTKNLQNHKQIHDKVKRYV CQICGSAFAQAAGLYLHKRRHNRPNGSVGAVGRSGRSSL" misc_feature 906..1163 /gene="LOC108068628" /note="Alcohol dehydrogenase transcription factor Myb/SANT-like; Region: MADF_DNA_bdg; pfam10545" /db_xref="CDD:463144" misc_feature 1266..1547 /gene="LOC108068628" /note="subfamily of SANT domain; Region: MADF; smart00595" /db_xref="CDD:214738" misc_feature 1548..1793 /gene="LOC108068628" /note="C2H2-type zinc ribbon; Region: zf-C2H2_8; pfam15909" /db_xref="CDD:464935" misc_feature 1557..1619 /gene="LOC108068628" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1572..1574,1578..1580,1584..1586,1590..1595, 1602..1607,1614..1616,1662..1664,1668..1670,1680..1685, 1692..1697,1704..1706,1755..1757,1761..1763,1767..1769, 1773..1778,1785..1790,1797..1799) /gene="LOC108068628" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1647..1709 /gene="LOC108068628" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1740..1802 /gene="LOC108068628" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1974..2036 /gene="LOC108068628" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature <2064..2270 /gene="LOC108068628" /note="FOG: Zn-finger [General function prediction only]; Region: COG5048" /db_xref="CDD:227381" misc_feature 2064..2132 /gene="LOC108068628" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(2085..2087,2091..2093,2097..2099,2103..2108, 2115..2120,2127..2129,2169..2171,2175..2177,2187..2192, 2199..2204,2211..2213,2253..2255,2259..2261,2265..2267, 2271..2276,2283..2288,2295..2297) /gene="LOC108068628" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 2154..2216 /gene="LOC108068628" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 2238..2300 /gene="LOC108068628" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" polyA_site 3365 /gene="LOC108068628" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gccgattccg ataagcaaac aaaatgccac cgtgcgccaa caccaacact aaaaattttt 61 tattggcaaa atcggagtaa agtaaaaata aagcaggatt ttcgagagcg ccgaccgcag 121 cgcagcgtac cgagagcccc aactgaatcg cgagctttca ccggaccggc cgaggatccg 181 caggcggcgc gatgagtgtc ctggcgtatc cacgcaccaa cgacgaggag gttttccgtc 241 actgcaccaa ggactgcggc gtggtgacgg ccaccgagga cttccagtac ttcgccctgc 301 gctgcatctt ctgcagcgag aagttcctct acttcgactc cttcatcggc cacatgcaga 361 cggcccacct gggcgaccag tcggtggcga atcccggcga cccgatgtcc ctgtccagtc 421 gcaacgggga tttgcccagc ttccacgaga tcgaagactt gacggacgcg gacacagcgc 481 tgctggagcc gcagatggtc atcaagcagg agctgcagga gctgccctgc agcgacgacg 541 aggtggcggc cgacgaggag gaggaggatc tgcgcgattc cgaggacgcc ggcgaggacg 601 acgacgagac catactgccc gagaacgatg ccccagtggt cagttccaag ccgcgtccgc 661 gcaaaaaggt caccaagcag cggcagcggg acatctccag cgaggcactc gaggattcct 721 cgctggacga ctacggggat ccggagaaca gctacatgga cgacaattcc ggcgagtaca 781 tggactacag cggcttcggg cccgagtcgg atttcctcag ctacgacgag atggtggagg 841 agtctctgct gggacgcgac cgggaggtta cgatgcacat caaggaccgc aagatgatcc 901 agttcctcat acactcgtat cagcgcaacc cctttttgtg ggaccacggc aacgcacagt 961 tccgggaccg cgtgaagcgc gcccgcttcc tcgactggat cgtgctggag ttcaagagcc 1021 ggttcaacat ctcgctggcc aaggacgcca tcacccgcaa gtgggacaac ctgcggacgg 1081 tctacaagcg ggagtgcaat cgcatggccc tggagaagac gaacatcagt acgctgtggt 1141 acttcaagga gctgcacttc ctcaacgagg tctacagcta caatgacaag atgtccgatg 1201 ccgttgtaaa ggaaacctcc taccgccgcc gcttctcggc catttggaac gacacgtcga 1261 cggccaagct gctgagcatg gtgaagcggt accagtgctt ctacaaccgc ttcgatcccg 1321 actaccgcag caaggagcgg cgcggcgagg gcctccacca gatggccgtt gagctgcagc 1381 agctgatcga cgtgaccacc atccagatct cgaagcgcat ctcccagctg cgcttcgact 1441 actccaggca gaagatggag cgcctcaatt gcgagcgcct gggcaagaag ttcattgcga 1501 actacacgta ctacgatcaa atgcacttca tggacgacga cataccgccc ttcaagtgcc 1561 cgcactgccc ggaaattatg cagacgctca gggaactgga cctccacatg ctcacccacc 1621 agcccagttt gggcggcggt tacttctgca acatctgcag cattcagttc cccaacgccg 1681 aggagttcga cagccacaag cagctgcatt tgggcggcgt ggcggaggtg aagttcaact 1741 gcgagctgtg cacggccagc ttccgcgaga aggccaacta cgaggagcac ctgcggcggc 1801 acaacgagga gctcttcctg ccctcgctgg cgctcaatca cagcatcatg gagggcggtg 1861 ccgaggacga cgaggagtcc gggggcagcg ggcagcggcg cagaaagacg aaggcctcca 1921 agtcgcccga ggacgcggcg gatgatgagg atccaattgc caagccgtac ggctgcgatg 1981 tgtgccgtcg cagcttcgcc acgccgggcc acctgaatgc ccatcggatt gtccaccagg 2041 acgagcggga gcggtgctac aaatgcgact atccgcagtg caataaatcg tttgtggcgc 2101 gcaacagcct gttcgagcat ctgaagcagc actacagcaa cgaggagttc aagtgcgaca 2161 tctgcggcaa gacgttcaag tcgacgaaga acctgcagaa ccacaagcag atccacgaca 2221 aggtcaagcg ctacgtctgc cagatctgcg gatcggcgtt cgcccaggcg gccggtctct 2281 atctgcacaa gcgtcgccac aatcggccca acggatccgt cggcgctgtc gggcgatcgg 2341 ggcgcagcag tctgtgagac agggaaaagg acaagggccg cggtcggggg cgcggacgtg 2401 gccgtgggcg tggtcgctat gtcaaatagt tttacgcgta atcgaaactg caactgtaac 2461 gtctttaaat tgccagccaa cccggcagct tagttagctt tcttaatatt acttttagac 2521 actcactcga tgttcagccc cattagcaat tcgattcggt tagagcttga tttaaaacaa 2581 cactatttcc cgtacaaatg ttaaactgaa agtgggtttt agttccctaa atttataact 2641 taaacccact gtcagtttaa caagcctcct taacaatata aaatttgtac ctctaagttt 2701 gtctgaatcg aaaacgccaa cagggtctct tgtattattt tgtttaatat cttagttccg 2761 tggtaaccta ctattaattg tactttatat gcatccactt acctgtagtc gtacttaaga 2821 gcgaaaagta tttaacaact ttagttttag gcaaacactt ccttccactt cccaatgatt 2881 cttgatgcca atttcgagtg cttctcccag aaaacacaca caactcaaag aatgtaatta 2941 accatgtaag aattgtaaac attcctcccc gtcccctaaa atcccctaaa atcgatgtga 3001 gccagtcgat gcattccaga actaagtatt tcattaagta ttttatgtac taactatata 3061 tttatacgca aagctaaaag tgcagacaaa catttgccat taaaccgacg aacagaaaga 3121 gaaaacccag ccacttgagc ccataattaa cagcaataac taagttacta agcatctaac 3181 aaaccaatta tgtttaagcc actaaaagcg aaatacacac tcaaatatta tgtactgacc 3241 gcgaacgact gaatctgtaa tacacttcga ggcgccgctt cgtcctgtaa tcgtaactgt 3301 aaccgtattt tgtaatccta tgtgtaaata tataactcga gcaggccgat taaccattaa 3361 cagca