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LOCUS XM_017158301 3018 bp mRNA linear INV 09-DEC-2024 (LOC108068623), transcript variant X2, mRNA. ACCESSION XM_017158301 VERSION XM_017158301.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017158301.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3018 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3018 /gene="LOC108068623" /note="uncharacterized LOC108068623; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108068623" CDS 465..2222 /gene="LOC108068623" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_017013790.2" /db_xref="GeneID:108068623" /translation="MFNFHKPRVYRSADGCCICRAKSSSSRFTASRKYEKESMQCFNL HEPRNGEICNACVLLVKRYKRLPVGSKRHWGHVVDARAGPGTKSLAKQKKRDNAEAAE GKGANGSGNSFLPEKFAKIFKKNRKGKVTAAAETAISVSSVINRPSSTSPTSEHQPSD SNESYDDEQMPGLMGPGSSGPGPSGAPYQTRKRTAAAALATSGCSESSKRPKLTGSKR RRQLPPQKNRRAVDNVPFFEESDLVRLEVCCGVVFQSLALGSCCYIIDPDVYQPCEKH QHLRHQQLLLKQQHLEQQVEAAVAAAAAANPIPIAQPTATQVLGQGPKMGPLKKHHLF FMRQSETFPEGDVHSISPIPLSKTETNGQPHSKPQTPQTVPVGAASPSSLSSSSNCST SSSVATKFNDNSSDSGFDEHVLERKSVSPPTQDEWKLRGATGGMQLILASGLPLSGQP QNLVLAGNEFTARIVQQRESGAAAAPLKINVLGGSQGNGNKMRAIFNSASSIQHENGV TTILPASSLAATNQTAAMNAIAPSTVTITPSSVGKKVAAVPNSKFILLKPAKFVGQTA AAAAEPPAPPPPPPEAKIV" misc_feature 468..1292 /gene="LOC108068623" /note="Protein Family FAM60A; Region: FAM60A; pfam15396" /db_xref="CDD:464703" polyA_site 3018 /gene="LOC108068623" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcgattttcg tcagtttctt caattcgcct ttgtgttcct cgcgtgcaga cgcgttttcg 61 tttttctccg ccgctttcct ttaaatttaa aacaaaaaat agtgctttgg tttttgtgaa 121 gaaatacgag caagtgtgtg tttattaaag cacaaatgca gccaactaca gtgaagcctg 181 ggcaatggat gttggcaatg caagcgctca aaacaacgac agcaaacgga atgattacgc 241 acaaataaca ctggcacaac ttcagtgaaa accgcaaccg taacacacac caaacactcg 301 caaaagcact caaaaaaacc tttttaaaca gttcaaagaa aaaaaactct aaaaaatcca 361 tcatttaaag cacaaaaagc aaaaaaccag cgacaaaaaa tttaaagcac aaatagacac 421 agtaaaacct gtgttatttc catccaaaaa catacgaaaa agccatgttt aatttccaca 481 agcctcgcgt ctaccgctcc gcggatggat gctgcatttg ccgggccaaa tcgagtagct 541 cccgtttcac cgcctcccgg aagtacgaaa aggagtcgat gcagtgcttc aatctccacg 601 agccccgcaa cggcgagatc tgcaacgcct gcgttctcct ggtcaagcga tacaagcgtc 661 tgcctgtcgg gagcaagcgc cactggggtc atgtggtgga tgcccgtgcc ggacccggaa 721 ccaagtcgct ggccaagcag aagaagcgcg acaacgccga ggcggcggag ggcaagggcg 781 ccaatggtag cggcaattca tttctgcccg aaaagttcgc caagatcttt aagaagaatc 841 gcaagggcaa agtaaccgca gcagcagaaa ccgctatatc tgtttccagt gtcatcaatc 901 gccccagcag cacttcgcct acctccgagc atcagccgag cgattcgaac gagagctacg 961 acgatgagca gatgccagga ttgatgggac ccggatcctc tggacccgga ccctctgggg 1021 cgccctatca aactcgcaag cggacggcgg ccgctgctct ggccacttcc ggatgctcgg 1081 agagcagcaa gcgtcccaag ctgaccggca gcaagcgacg ccgtcaattg ccgccgcaaa 1141 agaatcgacg ggccgtcgac aatgtgccct tcttcgagga aagtgatctc gtccgtctgg 1201 aagtctgttg cggagtggtc ttccagagtc tggctctcgg cagctgttgc tacatcattg 1261 atccggatgt gtaccagccg tgcgagaagc accagcatct gcgccaccag caactgctac 1321 tcaagcagca gcatttggag cagcaggtgg aggccgccgt cgccgccgct gccgccgcca 1381 atcccattcc catcgctcag cccaccgcca ctcaagtttt aggccaggga ccaaagatgg 1441 ggccactcaa gaagcaccat ttgttcttca tgcgacaatc agagacattt ccggagggcg 1501 atgtccatag tataagtcca attccactga gcaagactga aacgaacggc caaccacatt 1561 ccaagccgca gaccccccaa acggttcccg tgggcgctgc ctcgccctcg tcgctgtctt 1621 cctcctccaa ctgctccacc tcgtcctcgg tggccaccaa gttcaacgac aactcctcgg 1681 actcgggatt cgatgagcat gtgctggagc gcaagtctgt gagtccacca acgcaggatg 1741 agtggaagct gcgtggagcc acgggtggca tgcagctgat cctggccagc ggcctgcctc 1801 tgtctggaca gccgcagaat ctggtgctgg ctggcaatga gtttacggca cgcattgtgc 1861 agcagagaga atcgggagct gcagcggcac ctctcaaaat caacgtacta ggcggatctc 1921 agggcaacgg caataagatg cgtgcaatat tcaatagcgc cagcagcatt cagcatgaga 1981 acggggtgac caccatactg ccggcctcct cgctggcggc caccaatcag acggccgcca 2041 tgaacgccat tgcgcccagc acggtgacca taacgccgtc gtcggtgggc aagaaggtgg 2101 cggcggtgcc caattccaag ttcatactgc taaagcccgc caaatttgtg ggccaaacgg 2161 cagcggcggc ggcggagcca cccgctcctc ctcctcctcc tccagaagcc aaaatcgtct 2221 aagcgaacga ggacgagaac gaaagagaga gagatagata gataggagat gcctagcgtc 2281 tcgcagggag tttcccgccc cctgttacat ttgttataac tcgacctacc tatttaatgg 2341 ccacagaatg ccaaccacca cctccctccc atcaatttat aatttttttt ttgtattttc 2401 attttttatc tcaacgttta tggacgagtt tccccataca atatttattt taagatgtgc 2461 ccccaaagca gtgcataatg tacatacaca acgcagttta cttgtatcca tctcctcccc 2521 cctacaatgt cttttgtaga atactcagcc gaagcagcag ctccccatat cattttaggg 2581 tagtatttaa cgattcaaga acaccttaac ttagacgtta gtttatgtac atacgattta 2641 agccagccct aatgacttgt tttcgtctag ttgcccaact tagtcatcgt ctgcagttcg 2701 tacgttacca tgttgagcga ggatagaacg gatcgcagat cggagagcat ttttaaaagc 2761 gatttatcgt agtagttgga cgtgtagtag ttcagtgccc tagtagtttg taatcgaaca 2821 caaagtttgc ccctttccgc cgaggcttca agatcgcagc tgggaaagag agagcgaatt 2881 aaaccaccca aaatacacag aaacatacaa attgtagcct taggaatgat gcctaaacaa 2941 acaaacaaaa cggaaaaaaa cgaatgtgtg ttaaaagaaa atgttttttt aatttaaata 3001 caaataaaat atttgaaa