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LOCUS XM_017158300 3003 bp mRNA linear INV 09-DEC-2024 (LOC108068623), transcript variant X1, mRNA. ACCESSION XM_017158300 VERSION XM_017158300.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017158300.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3003 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3003 /gene="LOC108068623" /note="uncharacterized LOC108068623; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108068623" CDS 450..2207 /gene="LOC108068623" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_017013789.2" /db_xref="GeneID:108068623" /translation="MFNFHKPRVYRSADGCCICRAKSSSSRFTASRKYEKESMQCFNL HEPRNGEICNACVLLVKRYKRLPVGSKRHWGHVVDARAGPGTKSLAKQKKRDNAEAAE GKGANGSGNSFLPEKFAKIFKKNRKGKVTAAAETAISVSSVINRPSSTSPTSEHQPSD SNESYDDEQMPGLMGPGSSGPGPSGAPYQTRKRTAAAALATSGCSESSKRPKLTGSKR RRQLPPQKNRRAVDNVPFFEESDLVRLEVCCGVVFQSLALGSCCYIIDPDVYQPCEKH QHLRHQQLLLKQQHLEQQVEAAVAAAAAANPIPIAQPTATQVLGQGPKMGPLKKHHLF FMRQSETFPEGDVHSISPIPLSKTETNGQPHSKPQTPQTVPVGAASPSSLSSSSNCST SSSVATKFNDNSSDSGFDEHVLERKSVSPPTQDEWKLRGATGGMQLILASGLPLSGQP QNLVLAGNEFTARIVQQRESGAAAAPLKINVLGGSQGNGNKMRAIFNSASSIQHENGV TTILPASSLAATNQTAAMNAIAPSTVTITPSSVGKKVAAVPNSKFILLKPAKFVGQTA AAAAEPPAPPPPPPEAKIV" misc_feature 453..1277 /gene="LOC108068623" /note="Protein Family FAM60A; Region: FAM60A; pfam15396" /db_xref="CDD:464703" polyA_site 3003 /gene="LOC108068623" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atttctgaca tcgcggtttt accatcccta tctcgaaaaa tcaaaaagga agcgacgaaa 61 gtttaagccg ataaagtaga gtttatagtg aaaacaaagg tgacaaatac gaggagtgat 121 aaaagagcca tcgagcacaa atgcagccaa ctacagtgaa gcctgggcaa tggatgttgg 181 caatgcaagc gctcaaaaca acgacagcaa acggaatgat tacgcacaaa taacactggc 241 acaacttcag tgaaaaccgc aaccgtaaca cacaccaaac actcgcaaaa gcactcaaaa 301 aaaccttttt aaacagttca aagaaaaaaa actctaaaaa atccatcatt taaagcacaa 361 aaagcaaaaa accagcgaca aaaaatttaa agcacaaata gacacagtaa aacctgtgtt 421 atttccatcc aaaaacatac gaaaaagcca tgtttaattt ccacaagcct cgcgtctacc 481 gctccgcgga tggatgctgc atttgccggg ccaaatcgag tagctcccgt ttcaccgcct 541 cccggaagta cgaaaaggag tcgatgcagt gcttcaatct ccacgagccc cgcaacggcg 601 agatctgcaa cgcctgcgtt ctcctggtca agcgatacaa gcgtctgcct gtcgggagca 661 agcgccactg gggtcatgtg gtggatgccc gtgccggacc cggaaccaag tcgctggcca 721 agcagaagaa gcgcgacaac gccgaggcgg cggagggcaa gggcgccaat ggtagcggca 781 attcatttct gcccgaaaag ttcgccaaga tctttaagaa gaatcgcaag ggcaaagtaa 841 ccgcagcagc agaaaccgct atatctgttt ccagtgtcat caatcgcccc agcagcactt 901 cgcctacctc cgagcatcag ccgagcgatt cgaacgagag ctacgacgat gagcagatgc 961 caggattgat gggacccgga tcctctggac ccggaccctc tggggcgccc tatcaaactc 1021 gcaagcggac ggcggccgct gctctggcca cttccggatg ctcggagagc agcaagcgtc 1081 ccaagctgac cggcagcaag cgacgccgtc aattgccgcc gcaaaagaat cgacgggccg 1141 tcgacaatgt gcccttcttc gaggaaagtg atctcgtccg tctggaagtc tgttgcggag 1201 tggtcttcca gagtctggct ctcggcagct gttgctacat cattgatccg gatgtgtacc 1261 agccgtgcga gaagcaccag catctgcgcc accagcaact gctactcaag cagcagcatt 1321 tggagcagca ggtggaggcc gccgtcgccg ccgctgccgc cgccaatccc attcccatcg 1381 ctcagcccac cgccactcaa gttttaggcc agggaccaaa gatggggcca ctcaagaagc 1441 accatttgtt cttcatgcga caatcagaga catttccgga gggcgatgtc catagtataa 1501 gtccaattcc actgagcaag actgaaacga acggccaacc acattccaag ccgcagaccc 1561 cccaaacggt tcccgtgggc gctgcctcgc cctcgtcgct gtcttcctcc tccaactgct 1621 ccacctcgtc ctcggtggcc accaagttca acgacaactc ctcggactcg ggattcgatg 1681 agcatgtgct ggagcgcaag tctgtgagtc caccaacgca ggatgagtgg aagctgcgtg 1741 gagccacggg tggcatgcag ctgatcctgg ccagcggcct gcctctgtct ggacagccgc 1801 agaatctggt gctggctggc aatgagttta cggcacgcat tgtgcagcag agagaatcgg 1861 gagctgcagc ggcacctctc aaaatcaacg tactaggcgg atctcagggc aacggcaata 1921 agatgcgtgc aatattcaat agcgccagca gcattcagca tgagaacggg gtgaccacca 1981 tactgccggc ctcctcgctg gcggccacca atcagacggc cgccatgaac gccattgcgc 2041 ccagcacggt gaccataacg ccgtcgtcgg tgggcaagaa ggtggcggcg gtgcccaatt 2101 ccaagttcat actgctaaag cccgccaaat ttgtgggcca aacggcagcg gcggcggcgg 2161 agccacccgc tcctcctcct cctcctccag aagccaaaat cgtctaagcg aacgaggacg 2221 agaacgaaag agagagagat agatagatag gagatgccta gcgtctcgca gggagtttcc 2281 cgccccctgt tacatttgtt ataactcgac ctacctattt aatggccaca gaatgccaac 2341 caccacctcc ctcccatcaa tttataattt tttttttgta ttttcatttt ttatctcaac 2401 gtttatggac gagtttcccc atacaatatt tattttaaga tgtgccccca aagcagtgca 2461 taatgtacat acacaacgca gtttacttgt atccatctcc tcccccctac aatgtctttt 2521 gtagaatact cagccgaagc agcagctccc catatcattt tagggtagta tttaacgatt 2581 caagaacacc ttaacttaga cgttagttta tgtacatacg atttaagcca gccctaatga 2641 cttgttttcg tctagttgcc caacttagtc atcgtctgca gttcgtacgt taccatgttg 2701 agcgaggata gaacggatcg cagatcggag agcattttta aaagcgattt atcgtagtag 2761 ttggacgtgt agtagttcag tgccctagta gtttgtaatc gaacacaaag tttgcccctt 2821 tccgccgagg cttcaagatc gcagctggga aagagagagc gaattaaacc acccaaaata 2881 cacagaaaca tacaaattgt agccttagga atgatgccta aacaaacaaa caaaacggaa 2941 aaaaacgaat gtgtgttaaa agaaaatgtt tttttaattt aaatacaaat aaaatatttg 3001 aaa