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LOCUS XM_017158269 1814 bp mRNA linear INV 09-DEC-2024 (LOC108068603), mRNA. ACCESSION XM_017158269 VERSION XM_017158269.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017158269.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1814 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1814 /gene="LOC108068603" /note="pH-sensitive chloride channel 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068603" CDS 117..1694 /gene="LOC108068603" /codon_start=1 /product="pH-sensitive chloride channel 2" /protein_id="XP_017013758.2" /db_xref="GeneID:108068603" /translation="MDWSLIISILINCLYASALDDDCPTLADGDSLSQTQLLDRLTHG CRYDRLERPITYSESGQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLN FRNVSPKRRQPILGEQQLRDSLWMPHIFLANERDSSILGLTEKDILTSISPDGTVIVS NRIKATLYCWLNLKKFPFDEQHCSTILESWMYNTSELVLHWEQKRPITYDGALHLTEF VLQRSWSNETVINADLSDLRHGAFAGNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAI SWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPKVSYIKVSEVWFLGCTIFIF GSMVEFAFVNTIWRRKKSVPVKKLNSKHILKSTLSPNLLRRRSHARSRSFSGTALQKA ADTSSLGGAGFNNYLTVNLPITTIKEGQVLDEQRTRNLQKLDVNFVESAFGMPRGAAQ STGGISAASSTQTLTNNNRNEGGGGVDHQEEIDLSGWTTLTPQEIAMWIDSRARFVFP LAFLVFNLFFWTFVYCI" misc_feature 216..>1166 /gene="LOC108068603" /note="Cation transporter family protein; Region: LIC; cl42365" /db_xref="CDD:455710" misc_feature 918..1673 /gene="LOC108068603" /note="Neurotransmitter-gated ion-channel transmembrane region; Region: Neur_chan_memb; pfam02932" /db_xref="CDD:460753" ORIGIN 1 cactgctccg ccatcttgaa tcaaccgtta ggattttatt ggcgtgtctt tatttttaag 61 tttatgtcaa gttttgttca ttgtttataa attgtttata aatcgtatga gagataatgg 121 actggtcgct catcatatcg atcctgatca attgtctata tgcctcggcg ctggacgacg 181 attgtcccac gctggccgat ggggacagtt tgtcgcagac ccaattgctg gaccgcttaa 241 cccatggctg ccggtacgac cgactggaac gacccatcac ctattcggaa tccggccagc 301 gattgccggt ggacgtctat atgcgcgcct acatctactt catgcagaat ctcgaggccc 361 acgatctgca gttcaagatc tacgccctcc tccagatgcg ctacctggat ccgcgtctca 421 atttccgcaa cgtgagtccc aagcgcagac aaccgatttt gggggaacag cagctgcgcg 481 actccctctg gatgccacac atattcctgg ccaacgagcg ggactccagt attttgggcc 541 tcacggagaa ggacatcctc acctcgatct cccccgacgg caccgtgatc gtctcgaacc 601 ggatcaaggc caccttgtac tgctggctca acctgaagaa attccccttc gacgagcagc 661 actgctcgac gattctggag agctggatgt acaacacctc ggagctggtg ctccactggg 721 agcagaagcg tccgatcacc tacgacggtg cactgcatct caccgagttt gtgctgcagc 781 gatcgtggtc gaatgagacg gtgatcaatg ccgatttgag tgatttgcgg cacggcgcct 841 ttgcgggcaa ctacagctcc ctcagcttca ccgttcacct gactcgcgtg gtgggcttct 901 acctgatgga ctacttcctg ccctccatgc tgattgtggc catatcttgg gtatccttct 961 ggctgcaggc cgaccaggct ccgccgcgca ttacgctggg caccagcacg cttttgactt 1021 ttatcacctt ggcctcggcg cagggaaaaa ccctgccgaa ggtgagctac atcaaggtgt 1081 cggaggtgtg gttcctgggc tgcaccatct tcatattcgg cagcatggtg gagtttgcct 1141 ttgtcaatac tatttggcgt cgcaagaaga gtgtgccggt gaagaaactg aacagcaagc 1201 atattttaaa gtccacgcta tcgccgaatc ttctcaggcg tcgcagtcac gccagatcga 1261 gatcgttttc gggcacagcc cttcagaagg ccgccgatac gagctccctg ggcggtgctg 1321 ggttcaataa ctacctgacc gtcaatctgc ccatcaccac gatcaaagag ggtcaggttc 1381 tggacgagca gaggaccagg aacctgcaga aactggacgt gaacttcgtg gagagcgcct 1441 ttgggatgcc aaggggagcg gctcagtcga cgggaggcat tagtgcggcc agcagcaccc 1501 agactttgac caacaataat cgcaacgaag gcggtggcgg agtggatcac caggaggaga 1561 tcgacctgag tggctggacc accctcacgc cgcaggaaat cgccatgtgg atcgacagcc 1621 gggctagatt cgtttttccc ctcgcctttc tcgtcttcaa cctgttcttc tggacatttg 1681 tctactgtat ttaaatatga gaaattttaa aaaatattta atttatgttt ttgttgcttt 1741 ttattcaccc tttactgcat tatggttaat tattatgagt ttgtaaattg gagatctcta 1801 taaaagtatg ttgt