PREDICTED: Drosophila takahashii Huntingtin-associated protein 40

LOCUS       XM_017158268            1402 bp    mRNA    linear   INV 09-DEC-2024
            kDa (Hap40), mRNA.
ACCESSION   XM_017158268
VERSION     XM_017158268.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017158268.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1402
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1402
                     /gene="Hap40"
                     /note="Huntingtin-associated protein 40 kDa; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:108068602"
     CDS             149..1168
                     /gene="Hap40"
                     /codon_start=1
                     /product="uncharacterized protein Hap40"
                     /protein_id="XP_017013757.2"
                     /db_xref="GeneID:108068602"
                     /translation="MDKLRGGSLVGGGSSSGNPGPEHQQLEQYPKNLIEQYLRASSKI
                     KKFERAGFFKRFAPSVVDVQADFQRLAYSFEESGIQQYAAMCHIGYAKCESYGGAPQR
                     ESEAYLRAARSFLAAHNESGQLHLRTRHSGFREGALHCYHRAADRAVDGCVFKAAILR
                     ELKQLQRQLESTSSFASPTHQISDLETSAETCGQRGDFRSALQHYDDIVDNVYERRGA
                     RMYGELLRRVEVLRLLLLVHLNLPPARQSPAHIKLIEYYYNLAQFEAPPSSADDGGSV
                     ERPGAFVPQQQQYPLAEITCAWVERKMCDLKHLLRDFGAEFGALSSVERQLLAVMHLE
                     LSKSY"
     polyA_site      1402
                     /gene="Hap40"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tccgcgaatg gtcacaccgc ccatgacaaa ctcacaaaag aaaaacaaat aataataata
       61 caatatagcc gaaaataatg cgctattaac gcgatcggaa tcaacctgcg cggagacggt
      121 gacggcgacc caccccgcat gctgtagcat ggacaaactc cgcggcggca gcctggtcgg
      181 cggcggatcc tccagcggca atcctggtcc ggagcaccag caactggagc agtaccccaa
      241 aaacctgatc gagcaatatc ttagggcctc cagcaagatc aagaagttcg agcgggccgg
      301 cttctttaaa cgctttgcgc ccagcgtggt cgacgtacag gccgacttcc agcgactggc
      361 ctacagcttc gaggagtcgg gcatccagca gtacgcggcc atgtgccaca tcggctatgc
      421 caagtgcgag tcctacggcg gcgccccgca gcgcgagtcg gaggcctacc tgcgtgcggc
      481 gcgatccttc ctggcggccc acaacgaatc cgggcagctg catctgcgca cccgccactc
      541 gggcttccgg gagggagcgc tccactgcta tcaccgggcc gccgatcgag cggtggacgg
      601 ttgcgtcttc aaggcggcca ttctgcggga gctgaagcag ctgcagcgcc agctggagag
      661 caccagcagc ttcgcctcgc ccacccatca gattagcgat ttggagacga gcgcggagac
      721 ctgcggtcag cgcggcgatt tccggagtgc cctgcagcac tacgacgaca ttgtggacaa
      781 tgtctacgag cgacgagggg ctcgcatgta cggggaactc ttgcgacgcg tggaggtgct
      841 gcgtctgctg ctcctggtcc acttgaatct tccccccgct cgtcagtctc ctgcgcacat
      901 caagctgatc gagtactact acaacctagc ccaattcgag gcgcctccca gctcggcgga
      961 cgatggcgga tcggtggagc gaccgggtgc ctttgtgccg cagcagcagc agtacccgct
     1021 ggcggagatc acgtgtgcct gggtggagcg caagatgtgc gatcttaagc acctgctacg
     1081 cgactttgga gcggaatttg gagccctgag cagcgtggaa aggcagctgc ttgcagtgat
     1141 gcacttggaa ctgtccaaga gctactagat tttaggcgta acgaacttac tgtacattat
     1201 atactactgg gtcattacca ctgaataacc aagtctacca actaaccttt gaacgtgcct
     1261 acacgcatta aaaaaaaaaa cacattaata aatgcagcaa taaggagaaa gaggtgcgaa
     1321 gcgcaatgaa atgtaataac attcaaattt gagatttgta caataaataa aggaaggcga
     1381 gtggagatta gatgactaaa aa