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LOCUS XM_017157570 1508 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017157570 VERSION XM_017157570.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157570.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1508 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1508 /gene="cm" /note="AP-3 complex subunit carmine; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068156" CDS 92..1339 /gene="cm" /codon_start=1 /product="AP-3 complex subunit mu-2" /protein_id="XP_017013059.1" /db_xref="GeneID:108068156" /translation="MIHSLFIVNSGGEVFLEKHWRSVVSRSVCEYFLDAQRTAPYDVP PVIATPHYYLITVQRDAVSLVAACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKD NYVVVYELLDEMLDNGFPLATESNILKELIKPPNILRTIANTVTGKSNVSTTLPSGQL SAIPWRRSGVRYTNNEAYFDVIEEVDAIIDKSGSTVFAEIQGYIDCCIKLSGMPDLTL SFMNPRLFDDVSFHPCVRFKRWEAERLLSFIPPDGNFRLMSYHISSQSVVAIPIYIRH NFSIKTGEQGRLDLTIGPRNTLGRTVDKVKLELTMPRCVLNCLLTPNQGKYTFDSVSK TLSWDVGRIDVSKLPNIRGSVSITPGTTNIDANPSVNVQFQISQLAVSGLKVNRLDMY GEKYKPFKGVKYLTKAGKFQVRM" misc_feature 98..508 /gene="cm" /note="AP-3 complex subunit mu N-terminal domain; Region: AP3_Mu_N; cd14837" /db_xref="CDD:341441" misc_feature order(143..145,152..154,221..226,248..250,254..256, 260..262,296..304,308..316,323..325,335..337,413..418, 425..430,434..442,446..457,482..484,488..493) /gene="cm" /note="putative AP-3 beta interface [polypeptide binding]; other site" /db_xref="CDD:341441" misc_feature 578..1333 /gene="cm" /note="C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD); Region: AP_MHD_Cterm; cl10970" /db_xref="CDD:472082" polyA_site 1508 /gene="cm" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agtagccacc cctcacgctg tcatctccaa tagctcatcc ctaaaattga gttgcgaaaa 61 aaacacgaag taaacaaatt agagccgaac tatgatacac agcctgttta tcgtgaacag 121 cggcggcgag gtcttcctgg agaagcactg gcgctcggtg gtctcgcgat ccgtgtgcga 181 atacttcctc gacgcccagc gaacggctcc atatgatgtg ccaccggtga ttgccacgcc 241 ccactactac ctgatcacgg tgcaaaggga tgcggtgtcc ctggtggccg cctgcaagca 301 ggaggtgccg ccgctgttcg tcatcgagtt cctgcatcgc gtggtggaca ccttccagga 361 ctatttcggc gactgctccg agtcggtgat caaggacaac tatgtggtgg tctacgagct 421 gttggatgag atgctggaca atggctttcc gctggccacc gagagcaaca tcctcaagga 481 gctgatcaag ccgccgaaca ttctgcgcac cattgccaac acggtgacgg gcaagagcaa 541 tgtaagcacc accttgccat cgggacagct ttcggcgatt ccctggcggc ggagcggcgt 601 gcgttacacc aacaacgagg cctacttcga tgtcatcgag gaggtggacg ccattataga 661 caagtcgggc tccacggtct ttgcggagat ccagggatat atcgactgct gcatcaagct 721 atccgggatg cctgatctca cgctgtcctt catgaatcct cgcctcttcg acgacgtctc 781 cttccatccc tgcgtgcgct tcaagcgctg ggaggcggag cgcctgctct ccttcattcc 841 gcccgacggc aactttcgcc tgatgtcgta tcacattagc tcccagtcgg tggtggccat 901 acctatttac attcggcaca atttctccat caaaacgggt gaacagggac ggctggatct 961 gacaattgga ccgcggaaca cgctcggtcg caccgtggac aaggtgaagc tggagctgac 1021 catgccgcga tgcgtgctca attgcctgct gacgccgaat cagggcaagt acaccttcga 1081 ttcggtaagc aagacgctgt cctgggacgt gggacgcatc gatgtgtcca agctgccaaa 1141 tattcgggga tcggtctcca ttacgcccgg caccaccaat atagatgcca atccgtccgt 1201 gaatgttcag ttccagatct cccagctggc cgtctccggg ctgaaggtga atcgcctgga 1261 tatgtacggc gagaagtaca agcccttcaa gggcgtcaaa tacctgacca aggcgggcaa 1321 gttccaggtg cggatgtaga cgaggagcat cgaatctaaa tccagcttta attaagtgct 1381 agcgttaagt gtattccact gttttatgtc attcgtcccc tttctctctc tatctcatct 1441 gtatatctat attaaccacc tatctattat ctatatctac ccataaaagt taaactccaa 1501 ttgtagaa