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LOCUS XM_017157561 1401 bp mRNA linear INV 09-DEC-2024 (LOC108068146), mRNA. ACCESSION XM_017157561 VERSION XM_017157561.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157561.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1401 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1401 /gene="LOC108068146" /note="zinc finger protein 664; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108068146" CDS 105..1352 /gene="LOC108068146" /codon_start=1 /product="zinc finger protein 664" /protein_id="XP_017013050.2" /db_xref="GeneID:108068146" /translation="MPLTRETARELCRTCLLPLNRELQLQQLQEEIPIPISQELRQLL HMDLDQDEEDLPQELCLECRLLVENFERFRRKAEDSRRQLEEMLKREQDAKEPTFEVV YEEGQADEGSLHSLEPPEPEPDPDPIARTRRTTARNTLKCSLCRHSFAHQITLAAHVR KVHEGSKRPYQCDQCDKAYSFMGGLYTHIREVHAPQERRHPCDQPGCERIYTSRIAMQ KHKRLKHSPRGRDALRKFICEQCGASFNQSANLKFHLKTKHPTEDEVSSAAGERHFCE ICQKEFHSRYTLKYHTLQQHEVSQAELPHECQVCGRRMAKKFMLLQHMLKHSSEKLPC EHCGRPFARRFELEAHVQAVHLKLKPFACGHCPESFASRKTLRHHEYIHTGEKPYVCG TCGQAFRQQTCLKNHRKVHDKSS" misc_feature 135..365 /gene="LOC108068146" /note="Zinc-finger associated domain (zf-AD); Region: zf-AD; pfam07776" /db_xref="CDD:462262" misc_feature 528..593 /gene="LOC108068146" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(543..545,549..551,555..557,561..566,573..578, 588..590,633..635,639..641,651..656,663..668,678..680, 729..731,735..737,741..743,747..752,759..764,771..773) /gene="LOC108068146" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 618..683 /gene="LOC108068146" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 708..773 /gene="LOC108068146" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 816..881 /gene="LOC108068146" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(831..833,837..839,843..845,849..854,861..866, 873..875,942..944,948..950,960..965,972..977,987..989, 1038..1040,1044..1046,1050..1052,1056..1061,1068..1073, 1080..1082) /gene="LOC108068146" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 927..992 /gene="LOC108068146" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1023..1085 /gene="LOC108068146" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1104..1169 /gene="LOC108068146" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1119..1121,1125..1127,1131..1133,1137..1142, 1149..1154,1164..1166,1206..1208,1212..1214,1224..1229, 1236..1241,1248..1250,1290..1292,1296..1298,1302..1304, 1308..1313,1320..1325,1332..1334) /gene="LOC108068146" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1191..1253 /gene="LOC108068146" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1275..1337 /gene="LOC108068146" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" polyA_site 1401 /gene="LOC108068146" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 acctccagtt cagtatgacc atctcgcgtt tggcgtaaaa aataaaacta aaaagcttag 61 tgttctaaaa actaattttt aatttaaaaa aattaaaata aaaaatgcct ctgacgcggg 121 aaaccgcccg tgagctctgc cgcacctgcc tgctgccatt aaacagggag ctgcagctcc 181 agcaattgca ggaggagatt cccattccca ttagccagga gctgcggcag ttgctccaca 241 tggatctcga ccaggatgag gaggatctgc cccaggaact ctgcctggag tgccgcctgc 301 tggtcgagaa cttcgagcgg tttcgccgga aggcagagga ttccaggagg cagctggagg 361 agatgctgaa aagggagcag gatgcaaagg aacccacttt tgaggtggtc tacgaggagg 421 ggcaggcgga cgagggttcc ctgcacagcc tggagccccc cgaaccggag cccgatccag 481 atcccattgc caggaccagg agaaccaccg cgaggaacac cctaaagtgc agcctgtgcc 541 ggcacagctt cgcccaccag attaccctgg ctgcgcatgt gcgcaaggtg cacgagggca 601 gcaagcggcc ctaccagtgc gaccagtgcg acaaggccta cagcttcatg ggcggcctgt 661 atacgcacat tcgggaggtg catgcgccgc aggagcggcg gcatccctgc gatcaacctg 721 gatgcgagcg aatctacacc agccgcattg ccatgcagaa gcacaaaagg ctgaagcatt 781 caccacgcgg cagggatgcc ctcaggaagt tcatctgcga acagtgcggc gccagcttca 841 atcagtcggc gaatctcaag tttcatctga agaccaagca tcccaccgag gacgaggttt 901 cctccgccgc cggcgagcgg cacttttgcg agatctgcca gaaggagttc cactcgcgct 961 acaccctcaa gtatcacacg ctgcagcagc acgaggttag ccaggcggag ctgccgcacg 1021 agtgccaggt gtgcggccgc cggatggcca agaagttcat gctgctgcag cacatgctca 1081 agcactccag cgaaaagctg ccctgcgagc actgcggccg gccattcgcc cgccgcttcg 1141 agctggaggc ccacgtccag gcggtgcacc tcaagctcaa gcccttcgcc tgtggccact 1201 gccccgagag cttcgcctcg cggaagacgt tgcgccacca cgagtatatc cacaccggcg 1261 agaagcccta cgtctgcggc acctgcggcc aggccttccg ccagcagacg tgcctcaaga 1321 accaccgcaa ggtgcatgat aaatcgtctt agtcttagtc tttgtataat aaacttaagt 1381 agctttagtg accaagtaaa a