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LOCUS XM_017157559 3483 bp mRNA linear INV 09-DEC-2024 helicase CG8611 (LOC108068145), transcript variant X1, mRNA. ACCESSION XM_017157559 VERSION XM_017157559.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157559.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3483 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3483 /gene="LOC108068145" /note="probable ATP-dependent RNA helicase CG8611; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108068145" CDS 104..2914 /gene="LOC108068145" /codon_start=1 /product="probable ATP-dependent RNA helicase CG8611 isoform X1" /protein_id="XP_017013048.2" /db_xref="GeneID:108068145" /translation="MVDNITLNVNVGPTAQKKAQQLPSKAVKKRGQKSENFDFQFNAE KPKVKAIVVRRRAVSTASKATNPTSKQVPSVSTANSSDSSTKKDDLSSSDLMFNITPS KSAEKITSGDDFMLNVTTKPVVTQKAKPKITRAERLGKKQRQGKPLAKLSDEQLTKAL KNHRKPQNPNQMPRAGDIFRAQMEEERRKRRQEEAGEDEEPGEPASAKKATSSEKESP KSLEESSKSDEETPVEAQKPSKKQGETPVNRFRTKKIGLFDQSDVEALKQLGQRAVKP VKETIFTGTKISTLGLHPHAVKNLEDLLSIRELTSVQQKAIPEVLQGRDVLVRSQTGS GKTLAYALPLVELLQKQEPKIQRKDGVLALVIVPTRELVIQTYELIQKLVKPFTWIVP GSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTANFKLTKLQFLILDEADRLLE LGYERDVKQLVEAIDKQRAESEQKDDLPQLQRMLLSATLTSQVQQLAGLTLKNPLYID NSDEAASLALKSKDGYQKETIEALLEVEEDGLGEYQEDVTGVLSIPENLQLSYVVVPP KLRLVALSSLLSKELDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEE GDSEDDGETPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPD IKLVVQYTPPQTTADFVHRVGRTARAGRRGRAVLFLAPSEAQFVRHLEKKRIRIQQGD MYAYLQTLLPKDDEARTVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFP KELKPIFNVRIAHMGHFAKSFALKEAPSKFAAQHAAPKAAPPTNRLTYTERDPEKIQA QKRAKRRFTTTVSGEVRQLQQRDGAQAGKPGAPGSRGGFQGGGVGRSSFMKSLGKSRA LNMSEFDSGLPPEGPAKRRKQA" misc_feature 956..>2296 /gene="LOC108068145" /note="ATP-dependent RNA helicase DeaD; Provisional; Region: PRK11634" /db_xref="CDD:236941" misc_feature 992..1627 /gene="LOC108068145" /note="DEAD-box helicase domain of DEAD box protein 31; Region: DEADc_DDX31; cd17949" /db_xref="CDD:350707" misc_feature order(1016..1021,1025..1033,1040..1042,1094..1117) /gene="LOC108068145" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:350707" misc_feature 2399..2581 /gene="LOC108068145" /note="Domain of unknown function (DUF4217); Region: DUF4217; pfam13959" /db_xref="CDD:464056" ORIGIN 1 ttcgctgtga ctggcaaatc aagaagcaga gacgcgcacg ttttatttta tttacaaaat 61 ttacatttaa tttccaccga tttttagcca caaatgctgc aaaatggtgg ataatataac 121 gctgaatgta aatgttgggc cgacggccca gaaaaaagca caacagttgc cttcgaaagc 181 ggttaaaaaa cgtggacaaa aatcggagaa tttcgacttt caattcaatg cggagaagcc 241 gaaagtcaag gcaattgtgg tgcgaagaag ggcggtttcg acagcctcaa aagctacgaa 301 tcctacttca aaacaagtgc cctcagtttc caccgcgaat tcttcagatt cttctactaa 361 aaaagatgat ttatccagct ccgatcttat gttcaatatt acgccctcga aatcagctga 421 aaaaatcact tcaggcgacg atttcatgct gaatgtgacc accaaaccgg tggtcaccca 481 gaaagcgaag ccaaaaatca ctagagccga gcgattgggc aagaaacagc ggcaggggaa 541 gcccctggcg aagctcagcg atgagcagct cacgaaggca ttgaaaaacc accgaaagcc 601 gcagaatccc aatcaaatgc cgcgggcagg cgacattttc cgggcccaaa tggaagagga 661 gaggcggaaa agaaggcagg aggaagctgg agaggatgag gagccaggag aaccagcatc 721 cgctaagaaa gccacatcat ctgaaaagga atcccccaaa tccctggagg aatcatccaa 781 atccgacgaa gaaaccccag tagaagccca aaaacccagc aaaaagcaag gagaaacccc 841 tgtaaatcgc tttcgcacca agaagatcgg cctcttcgac cagagcgacg tggaggccct 901 caagcagctg ggccagcggg cggtgaagcc cgtcaaggag accatcttca cgggcacgaa 961 gatatccacc ctgggactgc atccccatgc ggtgaaaaat ttagaggacc tgctgagcat 1021 ccgtgagctg accagcgtgc agcagaaggc gatacccgag gtgctgcagg gcagggatgt 1081 gctggtgcgt tcgcaaacgg gctctggaaa gactctggcc tacgctctgc cgctggtaga 1141 actcctgcaa aagcaggagc ccaagattca gcgcaaggac ggcgtgctgg ccctggttat 1201 cgtgcccacg cgggagctcg tgatccagac gtacgaactc atccagaagc tggtcaaacc 1261 cttcacctgg atcgtgcccg gctctttgct gggcggcgag agccggaaga gcgaaaaggc 1321 gcgcctgcgc aagggcatca acatactgat cggcacgccg ggtcgtctgg tggatcacct 1381 gctgcacacc gccaacttca agctcacgaa gctacagttc ctcatcctcg acgaggccga 1441 tcgcctgctg gagctgggct acgagcgcga tgtcaagcag ctggtggagg ccatcgacaa 1501 gcagcgggcg gagagcgagc agaaggatga tcttccccag ctgcagagga tgctgctgag 1561 tgccaccttg acttcgcagg tccaacagct ggcgggtttg accctgaaga atcccctcta 1621 catcgacaac agcgatgagg cggccagctt ggccctgaaa tccaaggatg gctaccaaaa 1681 ggagaccatt gaggctctac tagaggtgga ggaggatgga ctaggcgaat accaggagga 1741 tgtgactggg gtgctcagca ttcccgagaa tctgcagctc agctatgtgg tggtgccgcc 1801 caagctgcgc ctggtggccc tgtcctcgct gctctccaag gaactggacg ccagtcccaa 1861 gcagttcaag gccatcgtct ttatgagcac cacggagatg gtgaacttcc accacgacat 1921 gctgaacgag gcgttgacca ggagagtgct cgacgaggag gatgagcagg aggaggggga 1981 ttcggaggac gacggggaga cgccgctgct gcagggactg cgcttcttca aattgcatgg 2041 ctccatgact caaaccgagc gacagggcgt ctttcgagga tttcgggact gcgccagctg 2101 cgtcctcctg gccaccgatg tggtgggtcg tggcatcgat gtgccggaca ttaagctcgt 2161 ggtgcagtac actccgccgc agaccaccgc cgactttgtg catcgcgtgg gccgaacggc 2221 gagggcggga cgaaggggca gggccgtgct gttcctggcg cccagcgagg cgcagttcgt 2281 gcggcatctg gagaagaagc gcatacgcat ccagcagggc gacatgtacg cctatctgca 2341 gaccctgctg cccaaggacg acgaggcgag gaccgtgcag gaggcggcct ccaatctgca 2401 gcacaagttc cagacgctgc tcgaggatga tcgcgagctg cacgacaagt cctgcaaagc 2461 ctttgtgtcc tggatgaagt tctactcgac gtttcccaag gagctgaagc ccatcttcaa 2521 tgtgcgcatc gcccacatgg gccactttgc caagagtttt gcgctgaagg aggcgccctc 2581 caagttcgcc gcccagcatg ccgcccccaa ggcggccccg cccaccaacc gactgaccta 2641 cacggaaaga gatcccgaga agattcaggc ccagaagcgg gccaagcggc gcttcacgac 2701 gacggtcagc ggggaggtgc gtcagctgca gcagcgggat ggagcgcagg ccgggaagcc 2761 cggagcgccg ggatcgaggg gaggcttcca gggcggcgga gtgggtcgca gcagcttcat 2821 gaagagcctg ggcaagtcga gggccctgaa tatgtccgag ttcgacagtg gattgccgcc 2881 ggagggaccc gccaagcggc gaaagcaggc gtaggaggtg gaattcagct ggaggagatt 2941 agaggaggag gagaacggag aaggagcact ttgcggcact ttatgcgcgc cattttgcct 3001 gtccgctgtg cctgctcaag catttaatcg aaaagaaaat tgctccatat atatatatac 3061 tatatgtaca gccgagtgaa aatctaggaa aatctaagaa aacccaagga gatgcgctca 3121 taaaagtttc atttttctca acttttaagc ccggacgtcc tgcgggaaaa gttgtggccg 3181 cctgccagca tattttaagc tttcctttcc tttttttcgt ttcaccaact gtttttccat 3241 ctttttcgaa tttttttttt ttgttttttg attactcgcc gtaatatgtt cgttcatttt 3301 ttgtgtggaa aatattagaa atccattttc cgctcactgc agattcattc agttctgaaa 3361 atgtcaccag tggcggcggc aaacggcgac ggggggtcag aggtcggcac gtgttgcctt 3421 tttatgcaac tgaagcgcat aatttgttgg acaaggcata aataaatatt ggatataaac 3481 act