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PREDICTED: Drosophila takahashii Chitinase 11 (Cht11), mRNA.


LOCUS       XM_017157551            2032 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017157551
VERSION     XM_017157551.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017157551.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2032
                     /gene="Cht11"
                     /note="Chitinase 11; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:108068138"
     CDS             112..1377
                     /gene="Cht11"
                     /codon_start=1
                     /product="chitinase-3-like protein 1"
                     /protein_id="XP_017013040.2"
                     /db_xref="GeneID:108068138"
                     /translation="MGSYAKVEEDSPQERSHRSLICWSALLLVSLAVITFWGFQGFRG
                     LWGLQLQTKNQEEQRLVCYYATDGGHNLSLLDVPGDLCTHINLGPAILSNASIFLPSS
                     LVQVLQNDSRSFRTAHPQVHLLLWIGGADSGRQFAHMVANHAMRKVFLRSLREIMRTY
                     PSLDGIDLDWEFPSAYDRERMHLSQLLYEIRTEWRREKRQQDILSLAVAAPEGIAFYA
                     YDIRELNLYADYVNLMAYDFHFYREDTPFTGLNAPLYARGQERSLMATFNINYTVQWW
                     LQSGLEPQRLVVGLPTYGHSFTLVNPLNQRIGAPASGYGKCGQLGFTTLSETCECAAR
                     YFKPTYAYDAESCSPYLSALQEWISYENRTSIACKANYVKSLKLGGVMVFSLNSDDLR
                     NACSYVEKTKNQEKPVFPLTQAIKEILRS"
     misc_feature    286..1278
                     /gene="Cht11"
                     /note="Glyco_18 domain; Region: Glyco_18; smart00636"
                     /db_xref="CDD:214753"
     polyA_site      2032
                     /gene="Cht11"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgaaatata ccagattgtt attgtttttg tgataacatt ttgattagca ataaaaagtt
       61 actgattaat gaaacaaagc gtagatgtga gattctggaa atctagaaaa gatggggagc
      121 tacgcgaaag tggaggagga ttcaccgcag gagcggagtc atcgatcttt gatctgctgg
      181 agtgctttgt tgttggtttc ccttgcggtt atcacattct ggggattcca gggattccgg
      241 ggactctggg gactccagtt gcaaaccaaa aaccaggagg agcagcgact ggtgtgctac
      301 tacgccaccg atggaggcca caatctcagt ttgctcgatg tgcccggtga tttgtgtacc
      361 cacattaatt tgggacccgc catcctgagc aatgcctcca tattcctgcc ctcatccctc
      421 gtccaggtgc tgcagaacga cagccgatcc tttcgcacgg cccatccgca ggtgcacctg
      481 ctcctttgga tcggtggagc ggacagtggc cgccagtttg cccacatggt ggcgaatcat
      541 gcgatgcgta aggtgttcct gcgctcgctg cgggaaatta tgcgcacata tcccagtctg
      601 gatggcatcg acctggactg ggagttcccc agtgcctacg atcgcgagcg catgcatctc
      661 tcgcagctgc tctacgagat caggacggaa tggcgtcgcg agaagcgtca gcaggatatc
      721 ctatcccttg cggttgctgc tcccgaggga atcgccttct atgcctacga tatccgggaa
      781 ctcaatctgt acgccgacta tgtgaatctg atggcctacg actttcactt ctatcgcgag
      841 gatacaccct ttacgggatt gaatgctcca ctgtatgctc gtggtcagga gagatccctg
      901 atggccactt ttaatatcaa ctacaccgtt cagtggtggc tgcaaagcgg cctggagccc
      961 cagcgattgg tggtgggtct gcccacctac ggtcactcct tcaccctggt gaatcctttg
     1021 aaccagcgaa ttggagcacc tgcctcgggc tacggcaaat gtggccaact gggcttcacc
     1081 acactctcgg aaacctgcga atgtgccgct agatacttca agcccaccta cgcctatgat
     1141 gcggagagct gttcgcctta tttgagtgcc ctgcaggagt ggatatccta cgagaaccga
     1201 acgagcatcg cctgcaaggc caactatgta aagtccctta aactaggagg cgtcatggtc
     1261 ttctctttga actccgatga cctcaggaat gcttgcagct atgtggaaaa aacgaaaaac
     1321 caagagaagc ccgtctttcc actcacccag gccatcaagg agatcctaag atcctaaggg
     1381 atgaatcgct gtgattatag ttacaatctc ggtattaaac atgggtttgg aaattgacac
     1441 acatgttaga aacagggata attgtatttt acagagtaat taaaattgtg aaaaataatt
     1501 gttaacacac agctcacttg tgttttttac acgtgttatt aacacgacgt gatttttaca
     1561 cactgtgctt tttacacact atgtttttaa cacaaatgaa atttacattt cactgacatt
     1621 aacgagtcga ggggaaaatg aaaaaccaat atgggccatg atagtaataa taatgttagt
     1681 tttaaccatt tcaaagcata aatgaattct tatactctag aaactttaat gtcaaaaact
     1741 cattgagtta aaaacacgct gtgtaaaaat ctcgtcgtgt aaataacaca tgtaggatac
     1801 aattttttac aaataagtca attacttttt tttaacactt tgacatttaa cactttaaat
     1861 accacaagtt tttatagtgt gtgttatttt ccaaaccctg ggtactaaat gatatttgat
     1921 ttgattttta tttgcaagag gcaaactgct cggaacagaa acagttttgt acatagtcat
     1981 agacgataac tttatgtata agtataaatt aaattatcac aatcgatcat aa