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LOCUS XM_017157550 3251 bp mRNA linear INV 09-DEC-2024 (Tmf), mRNA. ACCESSION XM_017157550 VERSION XM_017157550.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157550.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3251 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3251 /gene="Tmf" /note="TATA element modulatory factor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108068137" CDS 180..2933 /gene="Tmf" /codon_start=1 /product="TATA element modulatory factor" /protein_id="XP_017013039.2" /db_xref="GeneID:108068137" /translation="MSWFEKAKTVLIEALDIQDDDSKAEKGDLESPGAAAEGGVAAGN TTSTEAHPLPTTPPSETPTFFDNPHANEMVTIPPTPTSTSAYGKRQSATSDSVDLLSS SPTSPTTPISPSGDVVAKCMSESSLELITATTASEMEMSPDTEPSLPDSIVIIASNDT SDNAEGDGEDEEEERHLEDHLNDSTKTMKALVLSDIQATGTADSDSTQSFEDIQLQMS RQPPAAAKPDQSYSSTSSDIEIISNPNGDSSTNSTTTRTSPQKFKEHLAAAAASAAPG KTLPKSKGHHREPSEISLLSEDSQSELDKLVQRISELNQVIEAREQRLLQSERQNAEL LERNQELREAVANNANSPEAAEAVQRLSALEKKFQASIRERDALRIQMKSLRDELQNK IPKDELAECNEMIAGLQSEGEKLSKEILQQSNIIKKLRAKEKTSDTLLKKNGEQISLL SSESERLKKSLAAKEEMERSQIEAVCRMTADKKRVDEENADGRSRIEDLQSRLAALQA SFDGLKGDLQKRTRHEQDSLRAEQQEYVQQVADLREKLRLAEHSLARKEQQLREENRQ LLHRLEAAELRAESSTQELGATTTPLIRQIESLQRSLDQRTAGWNREEQQLLQKLDDS QLQLRSLQQLESVQGEKQELLRTRCGLLEEKLSNALMEAEAAKMALRQHDLDRDTKEL EHKRQLSRLQEELEQQREQLSQLEQQCQLAKAEAEQGKQPSLLTVEAVKAAASSSEQL QLPKSPPLSLADESGSNEEHLGGIIDWQADDLDCASNSGRQPSGIVQGVHLSFLAANT STFEHLQALLKQRDGELSHLQWELSRLQAERSVLDGEISSLTIELETMKEKLQVYEVM EKGYEDLQHRYDALLQMYGEKVERTEELELDLTELKTAYKLQIDELLAAPPPNLQRPA RQT" misc_feature <1050..>2405 /gene="Tmf" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" misc_feature 2544..2885 /gene="Tmf" /note="TATA element modulatory factor 1 TATA binding; Region: TMF_TATA_bd; pfam12325" /db_xref="CDD:432481" polyA_site 3251 /gene="Tmf" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atcgattacc gatagcactt atcgggaccg agttgagttg gaatccaaca aggagtcacc 61 acagaaaacc agggaattgc atgtgccccc ccaggagcag gcgttcgcaa ccggagcagc 121 aggcgtggcc acggaactag gacactctgg gccaagccaa tcacacattt acatccacaa 181 tgagctggtt cgagaaggcc aaaacggtgc tgatcgaggc gctggacatt caggatgacg 241 acagcaaggc ggaaaagggg gacttggagt cgccaggagc agcggcggag ggtggcgttg 301 cagctggtaa taccacatcc acggaggcac atccactccc aaccacgccc ccctccgaaa 361 cgcccacttt ctttgacaat ccgcatgcca acgagatggt caccattccg cccacgccca 421 cttctacatc cgcctatgga aagcgccagt cggccacctc ggactcggtg gatctgctct 481 cctcctcgcc cacgtcgccc acgacgccaa tctcgcccag cggcgacgtg gtggccaaat 541 gcatgtccga atcctcgcta gaactcataa ccgccacgac ggccagcgaa atggagatgt 601 ccccggacac ggagccctcg ctgccggaca gcattgtgat catcgccagc aacgatacat 661 cggacaatgc agagggcgat ggcgaggatg aggaggagga gaggcacctg gaggatcact 721 taaacgattc cactaaaacc atgaaagctt tggttttgag tgacattcag gccactggaa 781 ctgccgattc cgattccacg cagagcttcg aggacatcca gctgcagatg agccgccagc 841 cgcccgcagc cgccaagccc gatcagagct actcctccac ctcctcggac attgagatca 901 tctcgaatcc gaacggtgac tccagcacga atagcaccac cacgcgcacc agtccgcaga 961 aattcaagga gcatctagcg gcggcggcgg catcggcggc acctggaaag actcttccca 1021 agtcaaaggg ccatcatcgc gagccctcgg agatctctct cctctcggag gactcgcaat 1081 cggagctgga caagctggtg cagcggatca gcgagctgaa ccaggtgatt gaggcgcgcg 1141 agcagcgttt gctgcagtcg gagcgccaga atgccgagct actcgagcgc aatcaggaat 1201 tgcgcgaagc ggtggccaat aatgccaaca gtcccgaggc agcggaggca gtgcagcgtc 1261 tttctgcctt ggagaagaaa ttccaggcca gcatacgcga acgcgacgcg ctgcgcattc 1321 aaatgaagag cctgcgggac gaacttcaaa acaagatacc caaagacgag ctagccgagt 1381 gcaatgagat gatcgccggg ctgcagtccg agggcgagaa gctctccaag gagatcctgc 1441 agcaatcgaa catcatcaag aagctgcgcg ccaaggagaa gacctccgat acgctgctca 1501 aaaagaacgg cgagcagatc tcgctgctgt ccagcgaatc ggagcgtttg aagaaatcgc 1561 tggccgccaa ggaggagatg gagcgctcgc aaatcgaggc cgtttgccgg atgacggcgg 1621 acaaaaagcg cgtcgacgag gagaacgccg atggccgcag tcgcatcgag gatctgcaat 1681 cccgtttggc cgccctgcag gccagtttcg atggtctgaa gggcgatctg cagaagcgca 1741 cgcgtcacga acaggacagc ctgcgcgccg agcagcagga gtacgtccag caggtcgccg 1801 atctgcgcga gaagctccga ctggcggagc atagcctggc cagaaaagag caacagttgc 1861 gcgaggagaa tcgccagctg ttgcatcgcc tggaggcggc cgagctgcga gcggagagct 1921 ccacgcagga gctgggcgcc accaccacgc cgctcatccg tcagattgaa tcgctgcagc 1981 gatctttgga tcagcgtacg gctggatgga atcgcgagga gcagcagctg ctacagaagc 2041 tggatgactc gcaactgcag ctgcgctcgc tgcagcaact ggaatcggtg cagggcgaga 2101 agcaggagct gctgcgcacc cgctgcggcc tgctggagga gaagctatcg aatgcgctga 2161 tggaggcgga ggccgccaag atggcactgc gtcagcatga tttggaccgg gacaccaagg 2221 agttggagca caagagacaa ctcagccgcc tgcaggagga gcttgagcag caacgggagc 2281 agttaagcca gctggagcag cagtgccagc tagcgaaggc cgaggcggag cagggcaaac 2341 agcccagcct gctgaccgtg gaggcggtga aggcggcggc cagcagcagc gagcagttgc 2401 agctgcccaa atcgccgccg ctcagcctgg cggatgagag tggctccaat gaggagcacc 2461 tgggcggcat catcgactgg caggcggacg acctcgattg tgcctccaat tcgggccgcc 2521 agccatcggg catcgttcag ggcgtccatc tgagctttct ggcggccaac accagcactt 2581 tcgagcacct gcaggccctg ctgaagcagc gcgacggcga gctgagccat ttgcagtggg 2641 aactatcgcg actgcaggcc gagcgcagcg tactcgacgg cgagatatcc agcctgacca 2701 tcgaactgga aacgatgaag gagaagctgc aggtgtacga ggtgatggag aagggctacg 2761 aggatctgca gcatcgctac gatgccttgc ttcagatgta cggcgagaag gtggagcgca 2821 ccgaggaact ggaattggac ctcaccgagc tgaagacggc ctacaagctg cagatcgatg 2881 agcttctggc cgcaccgccg cccaatctcc agcggccggc gaggcagaca tgattgccgg 2941 agcgcaggat cgtctccctg cccgaattgc catgtctgcg ccgctgatcc gtctcccatt 3001 cccattccca gtttgcaaat gtattatgct ttatatatac actatatagt ctgggggaag 3061 ccactgcaat cctcccaaga aataacgata aaactatgat ttgcgtacgc tcctagttac 3121 attatgaatt atgatcgatt gtgataattt aatttatact tatacataaa gttatcgtct 3181 atgactatgt acaaaactgt ttctgttccg agcagtttgc ctcttgcaaa taaaaatcaa 3241 atcaaatatc a