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LOCUS XM_017157536 2229 bp mRNA linear INV 09-DEC-2024 (LOC108068129), mRNA. ACCESSION XM_017157536 VERSION XM_017157536.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157536.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2229 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2229 /gene="LOC108068129" /note="acyl-coenzyme A oxidase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068129" CDS 121..2163 /gene="LOC108068129" /codon_start=1 /product="acyl-coenzyme A oxidase 1" /protein_id="XP_017013025.2" /db_xref="GeneID:108068129" /translation="MSVNADLQRERAAATLDSEDFARWWAGGAAQLEERRALDRRFYE DPELVEPVHPSCLSYKERYEQTVARSTRFLAKLREWQREKQPQLQLSVNMLRDFRLLL SGSLGTGLFQQSFPLRVHFSMFMTTLLGQGTEEQQAQWLNRAWHMDGVVGTYAQTELG HGTFIRGLETRADYDVERQEFVLNTPSQSAYKWWPGGLGNTANVAIVLAQLYVRGKHY GLQSFLVRIRDERSHEPLPGVDVGDIGPRLGGNGVNNGFLGLHDVRIPRNQMLAKNAQ VLADGTFVQGRPPLLLYGTMVYVRVITLKDVLFGLLQAATIATRYSVVRRQSRIDGDQ PEVSVLDHVTQQAKVLPQIARGVSYRLVSDWLWRFYEQVLGQLEDNQAAGGGRNSLPE LHALSCCLKAVATDEASEGVDLLRKSCGGHGFLSSANFDSIYGLTAAAYTYEGEYTVL LLQTARFLVRQYVDSLKRKVLPPSVSYLRDTARLVWGKNLAANCVRALEISALEQVRQ AWQSQRTHQSSRVSAEMAANLSGRQLTAAAIAHAHAFFTRNAMDELEGLRRKGGDLEP QVSLVVGQLVELFVLDTFLRQAGCVLRWNGGITGTQLRFVERRYEELLAQLRPNAVAL VDGFDFHDRVLGSTLGCHDGRVYERLMEEARRNPLNQEPVNSSFYSHMLPMMRGKL" misc_feature 136..2088 /gene="LOC108068129" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:447864" misc_feature order(487..489,580..582,586..588,700..702,706..708, 1444..1452,1456..1458,1462..1464) /gene="LOC108068129" /note="active site" /db_xref="CDD:173838" polyA_site 2229 /gene="LOC108068129" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctggtgacct ctctcctatg ttcggtgctg caaaaatgtt ttcttcagcc accgatgctc 61 attgcactcg cgccgttcga ccggagaagt tgcgaaatct cgaagagatc ttggaaataa 121 atgtcggtga atgcggatct gcagcgggag cgggcggcgg ccacgctgga cagcgaggac 181 tttgcgcgct ggtgggcagg tggcgccgcc cagctggagg agcgtcgcgc cctggatcgt 241 cgcttctacg aggatcccga gctcgtggag ccagtgcatc ccagctgtct gtcgtacaag 301 gagcgctacg agcagaccgt cgctcggtcc actcgatttc tggccaagct gcgggaatgg 361 cagcgggaga agcagccgca gctgcagctc agcgtgaata tgctgaggga tttccggctg 421 ctgctctccg gctccctggg cactgggctc ttccagcaga gcttcccgct gcgcgtgcac 481 ttctccatgt tcatgaccac ccttctgggc cagggcaccg aggagcagca ggcccagtgg 541 ctgaatcgcg cctggcacat ggacggcgta gtggggacct acgcccagac ggaactgggc 601 catggaacct tcattcgcgg attagaaacc cgggctgatt acgacgtgga gcggcaggag 661 ttcgtcctga acacgccctc gcagagtgcc tacaagtggt ggcccggcgg actgggcaac 721 acggccaacg tggccatcgt cctggcccag ctgtatgtcc ggggcaagca ctacggcctg 781 cagtcgtttc tggtgaggat tcgggacgag cgcagccacg agccgctgcc cggcgtcgat 841 gtgggcgata taggacctcg tttgggaggg aatggggtga acaacggctt cctggggctc 901 cacgatgtgc gcattccgcg caatcagatg ctggcgaaga acgcccaggt cctcgccgac 961 ggaaccttcg tccagggacg accgccgctg ctgctctacg gcaccatggt ctacgtaagg 1021 gtcatcaccc tcaaggatgt gctctttgga ctgctgcagg ccgccaccat cgccaccagg 1081 tactccgtgg tgcgtcgcca gagccgaatc gacggggatc agccggaggt gtctgtcctg 1141 gaccacgtga cgcagcaggc aaaggtcctg ccgcagattg cgcgcggagt gtcgtatcgc 1201 ctcgtttccg actggctgtg gcgcttctac gagcaggtgc tcggccaatt ggaggacaat 1261 caggctgccg gaggcggtcg caactcgctg ccggagctgc acgccctgag ctgctgcctg 1321 aaggcggtgg ccaccgacga ggccagcgag ggcgtggatc tgctgcgcaa gagctgcggc 1381 ggccacgggt tcctctcctc cgccaatttc gacagcatct acggcctgac ggccgccgcc 1441 tacacctacg agggcgagta cacggtgctc ctgctgcaaa cggcgcgctt cctcgtccgc 1501 cagtatgtgg acagcctgaa gcgcaaggtc ctgccgccga gtgtctccta cttgcgcgac 1561 acggcgcgtc tcgtttgggg caagaacctc gcggcgaact gtgtgcgagc cctcgagatt 1621 tccgctttgg agcaggtgcg tcaggcctgg cagagccagc gaacccatca gtccagcagg 1681 gtgagtgccg agatggcggc caacctctcc ggcaggcagc tcaccgcggc ggccatcgcc 1741 cacgcccacg ccttcttcac cagaaatgct atggatgagt tggaaggcct tcgccggaag 1801 ggcggcgatc tggaaccgca ggtgtccctc gtggtgggtc agctggtgga gctcttcgtc 1861 ctggacacct tcctgcggca ggcgggctgt gtgctgcgct ggaacggcgg catcaccggc 1921 acccagctgc gcttcgtgga gcggcgctac gaggagctgc tggcccagct gcgtcccaat 1981 gcggtggccc tggtggacgg cttcgacttc cacgatcgcg tcctcggctc cacgctgggc 2041 tgccacgacg gtcgggtgta cgagcggctg atggaggagg cgcgccgcaa tccgctcaac 2101 caggagcccg tcaactcgtc cttctacagc cacatgttgc ccatgatgcg gggaaagctg 2161 tgatggcgtg gctttttata cataacttct tttttttctt tttcttaaat atatatgtta 2221 tccactggg