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LOCUS XM_017157529 2846 bp mRNA linear INV 09-DEC-2024 Tret1 (LOC108068122), mRNA. ACCESSION XM_017157529 VERSION XM_017157529.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157529.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2846 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2846 /gene="LOC108068122" /note="facilitated trehalose transporter Tret1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108068122" CDS 560..2134 /gene="LOC108068122" /codon_start=1 /product="facilitated trehalose transporter Tret1" /protein_id="XP_017013018.1" /db_xref="GeneID:108068122" /translation="MKGQQEEQLVPPAYKPTVVAGKDTSKDAKKEKPLGEGRLAVLRQ ELMVFLGNTGVLGSGMVVSMPAVTLTQLHDETQPFWLNKDESSWFASIQNMACPLGGL LVSYFLDRIGRKHTILLTNLIGLIGWILLVTSFMHSDRDMIYYQMLLGRCFGGIMIGM FVSPVGVYSAEISLPRIRGRLILGTSLGLASGILLMYVLGYFIRHNLQLIFAISCCYQ LAATLCVFPMPESPSWLLTKGKEERARASLRYFRGLPKKEVDYVPEFEAELAHMKELA DASNTTAAGESLSQMIHRPEVYKPVLMMTTFFGFQQACGVVVIIVYAVQIAQQAGVTI DPVLVAVMLGVARIITTLFMSGIFEKWGRKPAGIFSATGMGFCMLLLAGGNWFPDTLG TWHWLPVACIVCHIIFSTMGMLTLPFFMISEVFPQRARGSASGIAIFFGMILAFVMLK IYPNMKDALGTANLFAFYAGISFLAAAFIGTFVPETKGRTLEELEERWQTGKFSRRLT LVNLKDVELHEVFLKK" misc_feature 695..2038 /gene="LOC108068122" /note="Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; Region: MFS_GLUT6_8_Class3_like; cd17358" /db_xref="CDD:340916" misc_feature order(731..733,743..745,1115..1117,1124..1129,1136..1138, 1490..1495,1505..1510,1517..1522,1598..1600,1784..1789, 1796..1801,1811..1813,1880..1885,1892..1894) /gene="LOC108068122" /note="chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340916" polyA_site 2846 /gene="LOC108068122" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgcgtattcc cattctcatt tcgtattaaa tgcaaacaat aattttttaa tttgcaaatt 61 atgggacggc gaagagcata gcatccaatt cagtcgccca gcgaaagccg aacgaaacgg 121 acgtgtttct ttttttttct tataccaccg agaaggaata cagaaaaata caggggtaaa 181 ataaaaaaaa ggggaatgga tttttgcgaa tttggtaaaa acagcacgag aacaacgacg 241 gataggtaac gttcgaaaac tgataagtgc aacttgtgaa attgatactg gaggagcgag 301 cgagcccttg attctcgatt gaaatgcgcg gaagtttcca cttgtcgagc agtcgaagca 361 gtcggagcta tcagagccag catactgaat acccccggta gtcgacgaca tagccactaa 421 agctaattgt gagccattaa ttgattggca gcgaacagtg aaccaccgcc ggctggtaga 481 gaaacgcccc ctttttttcc aaccccccct ttccccacac acataaaata taaaataaaa 541 agcaaggaaa gacaacagaa tgaagggcca gcaggaagag cagctggtgc caccggccta 601 caagcccacc gttgtggctg gaaaggacac ctcgaaggac gccaaaaagg agaagcccct 661 gggcgaggga cgcctagcag ttctgcggca ggaactgatg gtcttcctgg gcaacaccgg 721 cgtcctcggc tccggaatgg tcgtcagcat gcccgccgtc accctcaccc agctgcacga 781 cgaaacgcag cccttttggc tcaacaagga cgagtccagt tggtttgcct ccattcaaaa 841 tatggcctgt cctctgggtg gcctgctggt tagctacttc ctggacagga ttggccgaaa 901 acacactatc ctgctgacca acctgatagg actcattggc tggatcctgc tggtcacaag 961 cttcatgcac tccgatcggg atatgatcta ctatcagatg ctcctgggtc gctgctttgg 1021 tggcatcatg atagggatgt tcgtctcgcc cgtgggcgta tattccgccg agataagctt 1081 gcccaggata cggggtcgcc tgatattggg cacttcgctg ggcctggcca gcggcatcct 1141 gctgatgtac gtcctgggct actttataag acacaacctc cagctgatct tcgccatcag 1201 ctgctgctac caactggcgg ccaccctgtg cgtcttcccc atgccggaat cccccagctg 1261 gctgctcaca aagggcaagg aggagcgggc cagggcgtcg ctcagatact tccgcggtct 1321 gccaaaaaaa gaggtggact acgtgccgga attcgaggcg gagctggcgc acatgaagga 1381 gctggcggat gcgagcaata cgaccgccgc cggggagtcc ctcagccaga tgatccaccg 1441 gccggaggtc tacaagcccg tcctgatgat gaccaccttc ttcggctttc agcaggcctg 1501 cggtgtggtg gtgatcatcg tgtatgccgt gcagattgcc cagcaggcgg gcgtcacaat 1561 tgatcctgtc ctggtggccg taatgctggg cgtggccagg ataatcacga cgctcttcat 1621 gagcggaatc ttcgagaagt ggggtcgcaa accggcgggg attttctcgg ccaccggcat 1681 gggcttctgc atgctgctcc tggccggcgg caattggttt cccgacactc tgggcacctg 1741 gcactggctg ccggtggcct gcatcgtctg ccacatcatc ttctccacca tgggcatgct 1801 gacgctgccc ttcttcatga tctccgaggt ctttccgcag cgcgcgaggg gcagcgcctc 1861 cggcatagcc atcttctttg gcatgatcct ggccttcgtg atgctaaaga tctatccgaa 1921 tatgaaggat gccctgggca ccgccaatct gtttgccttc tatgcgggca tctccttttt 1981 ggcggccgcc ttcattggaa cctttgtccc cgagacgaag ggcaggacgc tcgaggagct 2041 ggaggagcgt tggcagacgg gcaagttctc gcgaagattg acgctcgtca acctgaagga 2101 cgtggagctg cacgaagtgt tccttaaaaa atagtttaaa aattttaatg ataaaaatta 2161 taaaatgggg gttaaagtaa agtttcattg gcgcattcgc tggtttttcg tgtctcaaaa 2221 atgtctagaa aatcattggt aaattttatg agatttataa cgaatgccta aaaaaaatct 2281 agaaaatcgt tggtacattt tatgacattt acaatgaatg taccaaaaaa tctagaaatt 2341 cgatggtaaa ttttatggga tttttaacga gtgtctaaaa aaaaactaga aaatcattag 2401 taaattgtat gagatttata atgagtgcac caaaaaatct agaaaaccct tggaaaattt 2461 tataagattt acaaaaaacc tagaaaatta tttgcaaatt ttatgagatt tacaacgaat 2521 gtagcaatga aatacgaagc atttccatta gaaagcgggt cggggtcttc aatctgtgat 2581 gtgttaagta cttagccttg gcagccgcat ggaatgcggc aatttgatga acaataaaga 2641 ccatttacca agtaaacaaa agtcaattga agtgcatgtt gcagctgcag aatgaatttt 2701 cacacactta catttttctt ttattttttt gttttttttt cagccctata tgtatatatt 2761 tttatacttt tacgccttgt attattatta ataaaaacga atgtatgtaa aaccgctatt 2821 tgcaatatac aacacaaatg aaataa