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LOCUS XM_017157525 2644 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017157525 VERSION XM_017157525.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157525.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2644 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2644 /gene="B-H1" /note="homeobox protein BarH1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068119" CDS 185..1855 /gene="B-H1" /codon_start=1 /product="homeobox protein B-H1 isoform X1" /protein_id="XP_017013014.2" /db_xref="GeneID:108068119" /translation="MKDSMSILTQTPSEPNAAHSQLHHHLSTLQQHHHYGLQPPPVVG IHSHHIQGGTSTMSSSGGGGSTTKPNRSRFMINDILAGSAAAAFYKQQQQHHHQQLHH HHHHNNNNNGNNSGSSGGSSPAHNNNNNNTNGENFEAPIANLPPAHLHHPQPHPHPHP HSALMHPHGKLAGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNSAAAAAAAAA AAAVGAGGGGGGPPVGGGGGEVAPPKAGDLDDSSDYHEENEDCDSDEAGGSGHMDDHS VCSNGGKDDDGNSVKSGSASDISGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQE RQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNFAAFQRLYGGSPYLGA WPYAAAAGAAHGSAPHTNIDIYYRQAAAAAAMQKPLPYNLYAGVPSVGVGVGVGGVGP APFSHLSASSSLSSLSSYYQSAAAAAAAGQPGGAHPLPVPVAPPSSVGGGGGGGSPPK PISIPASVSPPPRPPSTPSPTLNPGSPPGRSVDSCSQSDDEDQIQIQV" misc_feature 1100..1270 /gene="B-H1" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" ORIGIN 1 gccgctaacg acgtcgctgg gtgaaaagtt tagttaaaag tccaaataat aagaaaactc 61 aagaactccc tacaaacaaa gagatagaaa ctttagtgaa taattgtgaa tttttttagt 121 gaagtgttgc aaaatattcg ataataaaaa aagggaacta gatatatttg aaatcctaaa 181 ccctatgaaa gactcgatga gcatactcac ccaaacgccc agcgagccaa acgcagcgca 241 tagccagctg caccaccact tgagtacgct gcagcagcac caccactacg gcctacagcc 301 accgccggtg gttggtattc atagtcatca tatccaaggc ggcacctcca ccatgtcctc 361 ctccggcggc ggcggcagca ccaccaaacc caatcgatcc cgcttcatga tcaacgacat 421 tctggcgggc agtgcagccg ctgccttcta caagcagcag cagcagcacc accatcagca 481 gttgcaccac caccaccacc acaacaacaa caacaacggc aataattcgg gatccagtgg 541 cggcagcagt cccgctcaca acaacaacaa taacaacact aatggggaga actttgaggc 601 acccattgcg aacttgccgc ctgcccacct gcaccaccca cagccacatc cgcatccgca 661 tccgcactcc gcactgatgc atccgcatgg caagctggcc ggccactttc cacccaccgc 721 cggcggcaat gggttaaacg tggcccaata tgcggcggcc atgcagcagc attatgccgc 781 tgctgctgcc gcggctgctg caagaaatag cgcagctgct gccgccgccg ctgccgctgc 841 ggctgccgtg ggagcaggag gcgggggagg aggaccccca gtgggtggtg gcggtggaga 901 ggtggcgcca ccgaaggccg gcgacctgga cgacagcagc gattatcacg aggagaacga 961 ggactgcgac agcgacgagg cgggaggcag cggccacatg gacgatcaca gcgtttgtag 1021 caatggcggc aaggacgacg acggcaacag tgtgaagagc ggctctgcca gcgacatcag 1081 cggtctgagc aagaagcagc ggaaggcccg caccgccttc accgaccacc aactgcagac 1141 gctggagaag tccttcgagc ggcagaagta cctcagcgtc caggagcgac aggagctggc 1201 ccacaagctg gacctcagcg actgccaggt gaagacctgg taccagaatc gcagaaccaa 1261 gtggaagcgt caaacggccg tgggtctgga acttttggcc gaggccggca actttgcggc 1321 cttccagcgg ctgtacggcg gttcgcccta tttgggggcg tggccgtacg cggcagccgc 1381 tggagccgcc cacggatcgg cgccgcacac taacatcgac atctactacc gccaagcggc 1441 cgccgcagcc gccatgcaga agccactgcc ctacaacctg tacgccggcg taccgtccgt 1501 gggcgtgggc gtgggagtgg gcggggtggg tccggctccg ttctcccacc tgtccgcctc 1561 cagttcgctg tcctcgctga gcagctacta tcagagtgcc gccgccgcag cggcagctgg 1621 acaaccggga ggggcgcatc cgctgccggt tcccgtagcg ccgccttctt cggtgggcgg 1681 aggaggagga ggaggatcgc cgcccaagcc catttccatt cccgcctccg tctccccacc 1741 gccaaggccg ccgtcgacgc ccagtcccac gctgaatccg ggaagtccgc ccggtcgatc 1801 cgtagacagc tgttcgcagt cggacgacga ggatcagatc cagatccagg tgtgagcggc 1861 tgaaaaggag tgcgtgccgc ctgaaaaacg tgattttctt ggggtataga ccacattgta 1921 tcttagatct tatacttatc aaagatgaag agagggaagt tttgtttttg aatttagccg 1981 gctacatatc atgtttttgt gctttttcct gcttacttgc tttcaattgc tccaaaaaat 2041 attacacatt tatatattat tattattatc aattttaatt gaataccata tcacccactc 2101 ctttctatgg ttcaaatttg agtacaaaaa aatatttcgt ttaaattaaa tggaaatata 2161 tttcatggca tttataaatt taagagcaaa aacacaaaag gttctgttag gtcataaaag 2221 gtagcacaaa aatgttcagt atttaaaacg aaaccattaa tatacttgac aaaaaaaata 2281 tccccaagaa tttgcgtttt ttagcccgcg catttgcccc gcttgtctgt gtgtgtgtgt 2341 gcctgtgtgt gtatataatc atatatctct gtgtgtgctt gcttaattta tttgatttgc 2401 ttttagtaac ttattgaaaa tgttttctac accttttttt tattagcata ctatagtggc 2461 attaaattaa gcaaatattt atttgaatgt tgtaaaaact agtagccaaa aaagcaaaat 2521 aattttgtat agttaagcct aaccacgaaa tgtattatcg aataaaccat ttttttttgc 2581 tagcctagaa ccataaacgt tgtaaatgta aaatgtaaag tatatttaac cgcatatttt 2641 tttg