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LOCUS XM_017157524 2978 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017157524 VERSION XM_017157524.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157524.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2978 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2978 /gene="B-H2" /note="homeobox protein BarH2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068118" CDS 286..2229 /gene="B-H2" /codon_start=1 /product="homeobox protein B-H2" /protein_id="XP_017013013.2" /db_xref="GeneID:108068118" /translation="MTTMPPEMSATTAAPVGSAPSATAPHHHHHSAVSAVGGGLPRPA SPAVGSNSNNSSNTTQTATATAATTATRSRFMITDILAGAAAASAAAAAAAAALAAAS SASSPSDSEHHHLHHQQQQQQHQQQQQHQQQQQHQQQQQHQQAALQQYIVQQQQLLRF EREREREREREREREHYRERHSPPGGGNPYAHHPMPPHLLAHFPPAHYAVLQQQQQQQ QQQHPHHLQLERERLEALHRHGHGVLPAGDPGQHLSHLSHLSHQHPHLHHPGHDERSR SPLMLQQLGGSAGSNNNNSSSANNNNNNSGSANSNINSGNSSSNNNNNGSGNGNMLLG GAGSSISGDQASTIDDSDSDDCGGKDDDGDDSLKNGSSANGDSSSHLSLSLSKKQRKA RTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAV GLELLAEAGNYAAFQRLYGGATPYLSAWPYAAAAAAQSPHGAPPSAIDIYYRQAAAAA ALQKPALPASYRMYPTSMPPGMALPGMPAPPPPGSSPMLSGYYAAAAAAAASAGAQQQ QQQPPVASRSPATSQSANSEADCERTSSSSRQRLITPSPPLNPGSPPHRERINEEEGE RDEERERERERDEEDDEELALEV" misc_feature 1453..1623 /gene="B-H2" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" ORIGIN 1 cagtttcggt cgaaagccaa aggcgagcgg ttgttgctac gctttcaaaa aacacgagaa 61 aagtgcgcgc acagcagcaa catttgcgtt tagaatccag ttaggcagtt ggccagctgg 121 aaaagtcaaa gaaaatttat agaaaatcaa atagagagaa taatacatca gaaaaaaaaa 181 aacaggaaaa aaccccagtg acagcagtgc taaaacctcg cgatacatag tatatttttt 241 tcgggtgctc gaagtgcaac agcagagtcg tcggcttaac cacacatgac cacaatgcca 301 ccggaaatgt ccgcaacaac ggcagctccc gttggcagtg cacccagtgc caccgctccc 361 catcatcatc atcattcggc ggtctcggcc gtcggcggcg gcctgccgcg tcccgcttcc 421 ccagccgtcg gcagcaacag caacaatagc agcaacacga cgcagacggc aacggcgacg 481 gcggcaacaa cagcgacgcg atcccgcttc atgatcaccg atattctggc cggtgcagcg 541 gcagcttcgg cggcggcagc tgcagcagcg gcggctctgg cggccgcctc ctcggccagc 601 agtccgtcgg actcggagca ccatcatctc catcaccagc agcagcagca gcaacaccag 661 cagcagcagc aacaccagca gcaacagcaa caccagcagc agcagcaaca tcagcaggcc 721 gccctgcagc aatacatcgt gcaacagcag caattgctgc gcttcgagag ggagagagag 781 agggaaaggg agagggaaag ggagcgggaa cattacaggg aaaggcattc gccacctggt 841 ggtggcaatc cctatgccca tcatcccatg ccaccccacc tgctcgccca ctttccgccc 901 gcccactatg ccgtgttgca gcagcagcag caacaacagc agcagcaaca cccgcaccat 961 ttgcaactgg agagggagcg attggaggca ctgcatcgac atggtcacgg ggtcttgcca 1021 gccggcgatc ctggccagca tttgagccac ctgagccacc tcagccatca gcatccgcat 1081 ctgcatcatc ccgggcacga tgagcgatcc cgatcgccgc taatgttgca acaactgggc 1141 ggcagtgccg gcagcaacaa caacaatagc agcagtgcta acaacaacaa caacaacagt 1201 ggtagtgcca acagcaacat caacagcggc aacagcagca gcaacaacaa caacaatggc 1261 agtggcaacg gcaacatgtt gctcggaggc gccggcagca gcatcagcgg cgatcaggcc 1321 agcacaatcg acgacagcga cagcgatgat tgcggcggca aggacgacga cggcgacgac 1381 agcttgaaga acggcagctc ggcgaacggc gactcctcgt cgcacttgag cctgagcctg 1441 agcaagaagc aacggaaggc gcgcaccgcc ttcaccgacc accaactgca gacgctggag 1501 aagtccttcg agcggcagaa gtacctcagc gtccaggatc gcatggagct ggccaacaag 1561 ctggagctga gcgactgcca ggtgaagacc tggtaccaga atcgcagaac caaatggaaa 1621 cgacaaacgg ctgtgggact ggaactgctc gccgaggccg gcaactatgc ggccttccag 1681 cggctgtacg gcggtgccac gccctatttg agcgcctggc cgtatgcggc cgccgctgcc 1741 gcccaatcgc cccacggcgc tccgccctcg gcgatcgaca tctactatcg ccaggcggcc 1801 gccgccgccg ccctgcagaa gcccgccctg cccgcctcgt accgcatgta ccccactagc 1861 atgccgccgg gcatggcgct gcccggaatg cccgcccccc cgccacccgg ctcctcgccc 1921 atgctgagcg gttattatgc cgctgcggcg gcagcagccg cttccgctgg cgctcaacag 1981 cagcagcagc aacctccggt ggcttcccgc tcgccggcga ccagccagag cgccaatagc 2041 gaggcggact gcgagcggac cagcagcagc agtcgccagc gcctgatcac gcccagtccg 2101 cccctaaatc cgggcagtcc gccgcaccgc gagcggatca acgaggagga gggggagcgg 2161 gacgaggaga gggagcgcga aagggagcga gatgaggagg acgacgagga actggccctg 2221 gaggtctgag aaatccccga gagaaatccc taccctttag ctggatctca caaaatttgt 2281 ctagagcagc ggtcggcggt cagcggtctg ccgccacacg cacagtatac aattaataat 2341 caacaagtgg gtggtgtgta ttcgagaact atgaaatatg gtggactaaa atcatagaat 2401 ttgtataaat attaaacaat aaaattaaat caaatacagc tggatttaaa atgatagata 2461 gcgatgtttt tatgcagaac aattcacaca ttcaaaatga gtgaatatct ttttaaattt 2521 tattttgaaa tagctttcat tagaaaatta aaaactaata ttattttaaa cacagctgtt 2581 agttaaaaat cctaactgcc actgaaaatg tatttagttt gtggttagct aaattcaact 2641 taaaatgaat ttcaaaattg tataaagaaa agtacccaag aagtaacagt attagacact 2701 ccccatgttc atctgtctcc aggaatagcc cccagtaatt gtgaagaaaa tatatataaa 2761 tatctataca taaatctttt tttttctata tttaattaaa actagcttag aggaaatttt 2821 gtaaattttt gtaaatgatt tttgtacata cgcagcagac caacaacaac aacaacatca 2881 cataagcaac acaacatttt ttttttccaa acaatatttt tttttacaac ttttttttgt 2941 gcctagtctt aagacgtcta ttgtgtgtag taataata