PREDICTED: Drosophila takahashii Yolk protein 2 (Yp2), mRNA.

LOCUS       XM_017157513            1674 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017157513
VERSION     XM_017157513.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017157513.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1674
                     /gene="Yp2"
                     /note="Yolk protein 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:108068109"
     CDS             47..1387
                     /gene="Yp2"
                     /codon_start=1
                     /product="vitellogenin-2"
                     /protein_id="XP_017013002.3"
                     /db_xref="GeneID:108068109"
                     /translation="MNPLRSLCVLACLLAVAVGSPQSGSRSSGRRSNSLDNVEQPSNW
                     VSPREIEDLPALKQVSLKKLQEMSLEEGATLLDKLYHLSQFNHVFKPDYTPEPSQIKG
                     YIVGERGQKIEFNLNNLVEKVKRQQKFGDDEVTIFIQGLPETNTQVQKATRKLVKAYQ
                     QRYNLQPYPTTSDSSSEEQRQRSSSEEQQSQRRKQNDDQEDQKTGDLIVIELGNAIED
                     FEQYATLNIERLGEIIGNRLVELTNTVNVPQEIIHLIGSGPAAHVAGVAGRQFTRQTG
                     HKLRRITALDPSKIYGKPEEKLTGLARGDADFVDAIHTSAYGMGTSQRLANVDFFPNG
                     PSTGVPGADNVVEAAMRATRYFAESVRPGNERNFPSVAASSYQEYKQNKGYGKRGYMG
                     IATDFDLQGDYMLQVNSKSPFGRSTPAQKQTGYHQVHQPWRQSSSSSNQGSRRQ"
     misc_feature    338..1285
                     /gene="Yp2"
                     /note="Region: Lipase; pfam00151"
                     /db_xref="CDD:395099"
     polyA_site      1674
                     /gene="Yp2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtacaacttg gtacggtgtc tgaaacagtc gaactcgaaa cacacgatga atcccctgcg
       61 cagcctttgc gttcttgcct gccttttggc cgtggccgtc ggaagccccc agtcgggcag
      121 ccggtcctcc ggtcgccgct ccaactccct ggacaacgtg gagcagccca gcaactgggt
      181 gagcccccgg gaaatcgagg atctgcccgc ccttaagcag gtcagcctca agaagctgca
      241 ggagatgagc ctggaggagg gcgccacgct gttggacaag ctctaccacc tgtcccagtt
      301 caaccacgtc ttcaagcccg actacacccc ggagcccagc cagatcaagg gctacattgt
      361 cggcgagcgc ggccagaaga tcgagttcaa cctgaacaac ctggtggaga aggtgaagcg
      421 ccagcagaag ttcggcgacg acgaggtcac catcttcatc cagggcctgc ccgagacgaa
      481 cacccaggtg cagaaggcca cccgtaagct ggtgaaggcc taccagcagc gctacaacct
      541 ccagccctac ccgaccacct cggactcgtc cagcgaggag cagcgccaga ggagctccag
      601 cgaggagcag caatcccagc gcaggaagca gaacgacgac caggaggacc agaagaccgg
      661 cgatctgatc gtcatcgagc tgggcaatgc catcgaggac ttcgagcagt acgccaccct
      721 gaacattgag cgcctgggcg agatcatcgg caaccgcctg gttgagctga ccaacaccgt
      781 gaatgtgccc caggagatca tccatctgat tggctccgga cccgctgccc atgtggccgg
      841 agtggctgga cgccagttca cccgccagac tggacacaag ttgcgccgca tcaccgctct
      901 ggatccctcc aagatctacg gcaagcccga ggagaagctg accggtctgg cccgtggcga
      961 tgccgacttc gtggacgcca tccacacctc ggcctatgga atgggcacca gccagcgtct
     1021 ggccaacgtg gacttcttcc ccaacggacc ctcgaccgga gttcccggcg ccgacaatgt
     1081 ggtggaggcc gccatgcgcg ccacccgcta cttcgccgag tcagtgcgtc ccggtaacga
     1141 gaggaacttc cccagtgtgg ccgccagctc gtaccaggag tacaagcaga acaagggcta
     1201 cggaaagcgc ggctacatgg gcatcgccac cgacttcgat ctccagggcg actacatgct
     1261 gcaggtgaac tccaagagcc ccttcggccg cagcactccc gcccagaagc agaccggcta
     1321 ccaccaggtc caccagccat ggcgccagtc ctcctcctcc tcgaaccagg gttcccgccg
     1381 tcagtagatc ttcgatccgc agtgatcctt agatgacgac ccgatcgcac acccctcatg
     1441 cgagcgaacc aaccccacac agaacatcct catcgagcag atgcctctgc tcacagcatc
     1501 ccctactttt agttacgctt cgttttttaa ttcacaataa aaaaccaact gcaatttaga
     1561 aaatttctat agatttttgg cagcgaaccc agtcgaatga gcaccccctt tccccatcca
     1621 actgtagctt tgctttctag gattgacaat aaaaaatctc tgcattgtaa aata