PREDICTED: Drosophila takahashii Yolk protein 1 (Yp1), mRNA.

LOCUS       XM_017157512            1545 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017157512
VERSION     XM_017157512.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017157512.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1545
                     /gene="Yp1"
                     /note="Yolk protein 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:108068108"
     CDS             56..1357
                     /gene="Yp1"
                     /codon_start=1
                     /product="vitellogenin-1"
                     /protein_id="XP_017013001.2"
                     /db_xref="GeneID:108068108"
                     /translation="MNPMRVLSLLACLAVAVMGKPNGRMDNSVNQALKPSQWLSGSQL
                     EAIPAVDDLTIERLENMNLERGAELLQQVYHLSQIHHNVEPSYVPSGIQAYVPKPNGE
                     KTAVPLNEMIQRLKQKQNFGDDEVTIIVTGLPQTTETVKKATRKLVQAYMQRYNQQQQ
                     RQQGRNGNQDYQDQSQKTSSEENSSEEVKNARTQSGDIIVIDLGSKLNNYQRYAMLDI
                     EKTGAKLGKWIVQMVNELDMPHDTIHLIGQNVGAHVAGAAAQEFTRLTGHKLRRVTGL
                     DPSKIVAKSQNTLTGLARGDAEFVDAIHTSVYGMGTPIRSGDVDFYPNGPAAGVPGAS
                     NVVEAAMRATRYFAESVRPGNERSFPAVPANSLQQYKQNDGFGKRAYMGIDTAHDLEG
                     DYILQVNPKSPFGRNAPAQKQSSYHGVHQAWNTNQDNKDYQ"
     misc_feature    <629..1267
                     /gene="Yp1"
                     /note="Region: Lipase; pfam00151"
                     /db_xref="CDD:395099"
     polyA_site      1545
                     /gene="Yp1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgctcagtg ttgaagtcgc ctccttgaag tcgatcccga atccgattcc gaaccatgaa
       61 ccccatgaga gtgctgagcc ttctggcttg cctggcggtc gccgttatgg gcaagcccaa
      121 cggtcgcatg gacaactccg tcaaccaggc cctgaagccc tcccagtggc tctccggatc
      181 ccaactggag gccatcccag ccgtcgacga tctcaccatt gagcgtctgg agaacatgaa
      241 cctggagcgt ggcgccgagc tgctgcagca agtttaccac ctgtcgcaga tccaccacaa
      301 cgtggagccc agctacgtgc ccagcggcat ccaggcgtac gtgcccaagc ccaacggcga
      361 gaagaccgcc gtgcccctga acgagatgat ccagcgtctg aagcagaagc agaacttcgg
      421 cgacgacgag gtgaccatca ttgtgaccgg actgccccag acgacggaga cggtgaagaa
      481 ggcgacccgc aagctggtgc aggcctacat gcagcgctac aaccagcagc agcagcgcca
      541 gcagggcagg aacggcaacc aggactacca ggatcagagc cagaagacca gcagcgagga
      601 gaattccagc gaggaggtga agaacgccag gacccagagc ggtgacatca tcgtgatcga
      661 tttgggctcc aagctgaaca actaccagcg ctacgcgatg ctcgacattg agaagaccgg
      721 tgccaagttg ggcaagtgga ttgtccagat ggtcaatgag ctggatatgc cccacgacac
      781 catccatttg attggccaga atgtgggtgc ccatgtcgcc ggcgccgctg cccaggaatt
      841 cacccgtctc accggccaca agctgcgtcg cgtcaccggt ctggatccct cgaagatcgt
      901 ggccaagagc cagaacaccc tgaccggcct ggcccgcggc gatgccgagt tcgtcgatgc
      961 catccacacc tccgtctacg gcatgggcac gcccatccgt tccggcgacg ttgacttcta
     1021 tcccaatgga cccgccgccg gagttcccgg tgccagcaat gtggtggagg ccgccatgcg
     1081 cgccacccgc tacttcgccg agtcagtgcg tcctggtaac gagaggagct tccccgccgt
     1141 gccggccaac tccctgcagc agtacaagca gaacgatggc ttcggcaagc gcgcctacat
     1201 gggcatcgat accgcccacg atctggaggg cgactacatc ctgcaggtca accccaagag
     1261 ccccttcggc cgcaacgctc ccgcccagaa gcagagcagc taccacggcg tccaccaggc
     1321 gtggaacacc aaccaggaca acaaggacta ccagtaggga acttctcgta tctggtatct
     1381 ggagaatgac aacaacaact tacaacccac tggccaccca accacacaca ctgtagtccc
     1441 taagttgaac ccaaattggc cctttcgaga gattactact caaccatgta acgagcacat
     1501 cgctaaattc agcaaataaa cgcttgataa agagcttaaa aataa