PREDICTED: Drosophila takahashii Rat1 Interacting Protein 1 (Rai1),

LOCUS       XM_017157508            1459 bp    mRNA    linear   INV 09-DEC-2024
            mRNA.
ACCESSION   XM_017157508
VERSION     XM_017157508.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017157508.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1459
                     /gene="Rai1"
                     /note="Rat1 Interacting Protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108068105"
     CDS             55..1182
                     /gene="Rai1"
                     /codon_start=1
                     /product="decapping and exoribonuclease protein Rai1"
                     /protein_id="XP_017012997.2"
                     /db_xref="GeneID:108068105"
                     /translation="MYGNRGVINVPWHQHRHGARFDRPFPSMSRPECIGVCSIDARRD
                     YVDDASGASYLVGPPWPPLPIDLNAGIEDVIRKSTDFATKDLEFVLLYIRHHKEQLLR
                     RRHSDPHAFTLDTDFVTLRGILRQIMCMQYEWNREFRIKATRLNGTIYMAKEETPEQR
                     LESESMTRGQLDMCSWGFKFEQYVTSKEAQGKPVTDVPVNEAEEFMAMFRGQLAGLRL
                     LFGAEMDCVVSKEPVDFKDPKVLDSLKFVELKTSAHNMNHKQLRSFDNYKSANWWSQS
                     FLVGIQTIYAGLRDSRGLVQEIKEYDVRSLARNKPWSPSAMAWFLEQFLRKLKELLVA
                     LDDPLAVVQVTFRDRMANYEVLRGPEHQILPDWYREMLKTE"
     misc_feature    724..945
                     /gene="Rai1"
                     /note="RAI1 like PD-(D/E)XK nuclease; Region: RAI1;
                     pfam08652"
                     /db_xref="CDD:462550"
ORIGIN      
        1 atttttatac taatttccgg gtaatttgat ttggactcct gatcctctgg agaaatgtac
       61 ggcaacaggg gagtcatcaa cgtgccgtgg caccagcacc ggcacggcgc ccgcttcgat
      121 cgcccctttc cctcgatgag ccggccggaa tgcatcggcg tctgcagcat cgacgctcgc
      181 cgggattatg tggacgacgc cagcggggcc agctacctgg ttgggccacc ctggcccccg
      241 ctgcccatcg atttgaatgc gggtatagag gacgtgatcc gtaagtccac ggacttcgcc
      301 accaaggacc tggaattcgt tctcctttac atccggcacc acaaggagca gctgctccgg
      361 cggcgccact ccgatcccca cgccttcacc ctggacaccg actttgtgac gctgcgcggc
      421 atcctgcgcc agatcatgtg catgcagtac gagtggaacc gcgagttccg catcaaggcc
      481 acccggctga acggcaccat ttacatggcc aaggaggaga cgccggagca gcggctggag
      541 agcgagagca tgacccgggg ccagctggac atgtgctcgt ggggcttcaa gttcgagcag
      601 tatgtgacca gcaaggaggc gcagggcaaa ccggttacgg atgtgcccgt caacgaggcg
      661 gaggagttta tggccatgtt ccggggacag ctggccggtt tgaggctgct cttcggcgcc
      721 gaaatggact gtgtggtcag caaggaacca gttgacttca aggatcccaa ggtgctggac
      781 tcgctgaaat tcgtggagct gaagacctcg gcccacaaca tgaaccacaa gcagctgcgc
      841 agcttcgaca actacaagtc ggccaactgg tggagccagt cgttcctggt gggcatccag
      901 acgatctacg cgggactgcg cgactcccgg gggctggtgc aggagatcaa ggagtacgac
      961 gtccgcagtt tggcccgcaa caagccgtgg agtccatcgg ccatggcctg gttccttgag
     1021 cagttcctgc gcaagctcaa ggagctgctg gtggccctcg acgatccctt ggccgtcgtc
     1081 caggtgactt tccgggaccg aatggccaac tacgaggtgc tgcgcggccc ggaacaccag
     1141 atcctgccgg actggtatcg cgaaatgctc aagacggaat aaataattaa ggctcttaac
     1201 ttaagtcact ccagtcaacc attaaactaa aacaattcct taataataaa ctagtataga
     1261 atcttaggaa aagatttact aatttaaaag actaattcat cattctagaa ctaagatctt
     1321 gcttaaaaac aatgcataaa tattgcattt accatataaa agatgtactg gtatcgcgaa
     1381 atgctcaagg cgggataaat aattaaggct cttaacttaa atcagtcaag tctaccataa
     1441 aaccaataaa tttgggaag