PREDICTED: Drosophila takahashii RNA-binding protein NOB1

LOCUS       XM_017157495            1644 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108068092), mRNA.
ACCESSION   XM_017157495
VERSION     XM_017157495.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017157495.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1644
                     /gene="LOC108068092"
                     /note="RNA-binding protein NOB1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108068092"
     CDS             83..1468
                     /gene="LOC108068092"
                     /codon_start=1
                     /product="RNA-binding protein NOB1"
                     /protein_id="XP_017012984.2"
                     /db_xref="GeneID:108068092"
                     /translation="MAETSGKIKFLVADTTAFINAVPLNEYAEQVLTVPDVVAEVRNK
                     RQIRRLCVLPFDLQVREPRPESIKHCVEFAKRTGDYASLSGIDLKVISLTYELEADTV
                     GTAHLRTEPVMAQTIASKEKPEEMQDASNKRLVGWYMPEGEEEEDDSEEEEDSQGEEE
                     QEQEESQDSPPVDNIKAAIEAQLAGKEPLPTEDLSEEPSQEELDKLFEQLQCAPSAEE
                     EQELAELLISQPAEVESEESEPVQSQNQEDEVGDDGWITHSNIKKAKKALEGKVETDE
                     VPPVACMTTDYALQNVLKQLNLHLAALNGRIIKQLRTYILRCYACYRTTSIMTKVFCP
                     NCGNKTLKRVAVSLDENGRQVIHINTRRPLTNKYKNQSLPRFTGGKHSRNPILFEDQP
                     MPRQMPSRVAKTKTNALDQDYMAGFSPFVLRDVDSKSAMLRSKGNLKEWARNNNFEED
                     RRRKNYNRLYK"
     misc_feature    113..373
                     /gene="LOC108068092"
                     /note="PIN domain of ribonuclease; Region: PIN_6;
                     pfam17146"
                     /db_xref="CDD:465362"
     misc_feature    <884..1114
                     /gene="LOC108068092"
                     /note="PIN (PilT N terminus) domain: Superfamily; Region:
                     PIN_SF; cl28905"
                     /db_xref="CDD:475124"
     misc_feature    1004..1219
                     /gene="LOC108068092"
                     /note="Nin one binding (NOB1) Zn-ribbon like; Region:
                     NOB1_Zn_bind; pfam08772"
                     /db_xref="CDD:462597"
     polyA_site      1644
                     /gene="LOC108068092"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gccatcactg aaatattttc gacacgtgct gacttgtttt tccctgcctg ctttgttttt
       61 catgtgaaaa tcgccccgga aaatggctga gacgagcgga aagatcaagt tcctggtggc
      121 ggacaccacc gccttcatca acgccgtgcc cctgaacgaa tatgcggagc aggtgctcac
      181 cgtaccggat gtggtggccg aggtgcgcaa caagcgccag atccggcgcc tctgcgtcct
      241 gcccttcgac ctgcaggtgc gcgagccgcg tcccgagagc atcaagcact gcgtggagtt
      301 cgccaagcgg acgggcgact atgcgagtct ctcggggatc gacctgaagg tcatctcgct
      361 cacctacgaa ctggaggcgg acaccgtggg caccgcccac ctgcgcacgg agcccgtgat
      421 ggcccagacc attgcctcca aggagaagcc cgaggagatg caggatgcga gcaacaagag
      481 gctggtgggc tggtacatgc cagaggggga ggaggaggag gatgactccg aggaggagga
      541 ggactcccag ggggaggagg agcaggaaca ggaggaatcc caggattccc cacccgtaga
      601 caacataaaa gccgccattg aagctcagtt agctggcaag gagccactgc ccaccgaaga
      661 tctaagcgag gagcccagcc aggaggagct ggacaagctg ttcgagcagc tgcagtgcgc
      721 gcccagcgcc gaggaagagc aggaactcgc tgaactgcta atttcccagc ccgccgaagt
      781 ggaatcggag gaatccgagc ccgtgcagag ccaaaatcag gaggatgagg tgggcgacga
      841 tggctggatc acgcattcga acatcaagaa ggccaagaag gcgctggagg gcaaggtgga
      901 gacggatgag gtgccgccgg tggcctgcat gaccaccgat tacgcgctgc agaatgtcct
      961 aaagcagttg aaccttcacc tggctgcctt gaatgggagg atcatcaagc agctgcgcac
     1021 ttatatactg cgttgctatg cctgctatcg gacaaccagc atcatgacca aggtcttctg
     1081 cccgaactgc ggcaacaaga cgctcaaacg agtggccgtg agtctggacg agaacgggcg
     1141 gcaggtgata cacatcaata cgcgacggcc gctgaccaac aagtacaaga atcagagtct
     1201 gccgcgcttc accggcggca agcattcgcg caatcccatt ttattcgagg atcagccgat
     1261 gccccgccag atgccgtcgc gcgtggccaa gaccaagacg aacgccctgg accaggacta
     1321 catggccggc ttctcgccct tcgtgctgcg cgacgtcgac tccaagtccg cgatgctgcg
     1381 ctccaagggc aacctcaagg agtgggccag gaacaacaac ttcgaggagg accgccggcg
     1441 caagaactac aatcgcttgt acaagtagat aaccggggag taataacccc ctaatcgtag
     1501 actttatata atatgtaata tatataaaat aaaactcaag gaagaactta aatcttcagg
     1561 tggaaaatgt aaatttacga cattttacaa ggcttttaaa tatttataaa cttttttttt
     1621 gtggaaataa atcagttttt taag