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LOCUS XM_017157493 1545 bp mRNA linear INV 09-DEC-2024 (Rrp45), mRNA. ACCESSION XM_017157493 VERSION XM_017157493.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157493.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1545 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1545 /gene="Rrp45" /note="exosome complex component Rrp45; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108068090" CDS 95..1330 /gene="Rrp45" /codon_start=1 /product="uncharacterized protein Rrp45" /protein_id="XP_017012982.2" /db_xref="GeneID:108068090" /translation="MFMNSNLFEPGKSKPERNFVQLAAKQSQRFDGRRPNECRDVELT FGADWGTVAVSLGATKVLTHVTCDLGAPTTSRPNEGKLQLNVNLGGVAFLDELQTTHD QRSLTLNSLLERTFRSSRCVDLESLCVAAEQHVWCIRVDISVLNHDGNLYDASTIATL AALMHFRRPDVTFADDELRIYTEKEREFIPLLFLHYPVSVAYCIYKSSGQPIVDPTLL EENAADSVIVLSFNSYQELCTLNAGGTAPTNVRTIMQCARNAATRAKSLVDYIRKALS LDEERRQQGGRRFQGLVALIGENQHKLSFNQLMGQQRQEVPATASEKMEVDVSITKPE IEEIQPEAKQETGDAPMDSSSWLPQDEDSQELPTPSEASASKGAKGKQNRSKSKANKK QLAKKPNHSDSEEEAKPVI" misc_feature 131..901 /gene="Rrp45" /note="RRP45 subunit of eukaryotic exosome; Region: RNase_PH_RRP45; cd11368" /db_xref="CDD:206773" misc_feature order(131..139,146..151,161..163,170..172,176..178) /gene="Rrp45" /note="Rrp40 interface [polypeptide binding]; other site" /db_xref="CDD:206773" misc_feature order(233..235,239..241,284..286,290..298,341..343, 347..349,362..364,413..415,422..424,434..436,500..502, 515..517,530..532,584..592,680..682,803..838,851..853, 863..865) /gene="Rrp45" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:206773" polyA_site 1545 /gene="Rrp45" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcgaacgagg tggcaaggcc gcagcagttg tctgcacgtt tttaaaagcc ggccaaaaat 61 cgccaacgac tcgaaaccga aatccaaaac aaagatgttt atgaactcca atctcttcga 121 gccgggcaaa tcgaagccgg agcgtaactt cgtccagctg gcggcgaagc agagccagcg 181 cttcgacggc cggcggccca acgagtgccg cgacgtggag ctgaccttcg gcgcggattg 241 gggcaccgtg gccgtttccc tgggcgccac aaaggtgctg acccacgtga cctgcgacct 301 gggcgcaccg accacctcgc gtcccaacga gggcaagctc cagctgaacg tgaacctcgg 361 aggggtggcc tttctggacg agctacagac gacacatgac cagcgatccc tgaccctcaa 421 ttcgctgctg gagcgcacat tccgcagctc caggtgcgtc gacctggagt ccctgtgcgt 481 ggccgccgag cagcatgtgt ggtgcatccg cgtggacatc agtgtgctca atcacgacgg 541 caatctgtat gatgccagca ccatagccac tttggccgcc ctgatgcact tccgccggcc 601 ggatgtcacc tttgccgacg acgagctgcg gatttacacg gaaaaggagc gcgagtttat 661 ccctttgttg tttctccact atcccgtgag cgtcgcctat tgcatctaca agagcagcgg 721 ccagcccatt gtggatccca cgctgctgga ggagaacgcc gccgattcgg tgattgtcct 781 gagctttaac tcctaccagg agctctgcac cttgaatgct ggaggcactg cacccacaaa 841 cgtgcgaacc atcatgcaat gtgcccgcaa tgctgcgact agggccaaat ccctggtgga 901 ttacatacgc aaggccctgt cgctggacga agagcggcgg cagcagggcg gaaggcggtt 961 ccagggactg gtggctctca taggcgagaa tcagcacaag ctgagcttca accagctgat 1021 ggggcagcaa aggcaggaag tgccagctac tgcaagtgag aaaatggagg tggatgtaag 1081 cataactaag ccggagatcg aggagattca gccggaggcc aaacaggaga caggagacgc 1141 acccatggac tcgagcagct ggctgcccca ggatgaggac tcccaggagc tgcccacgcc 1201 ctcggaggca tcggcatcga agggcgccaa gggcaaacag aatcgcagca agagcaaggc 1261 caacaaaaag caattggcca agaaaccaaa tcacagcgac tccgaggagg aggccaagcc 1321 agtcatctag ccgatatgta tacaaaagta gtcatgtagt taagtgaaaa tgctttctat 1381 taagttttat ttaggcttaa atgtatggct aaaatcagtc taggctttaa cagaaatcgt 1441 ttaatgcgca accgatgcga tgttcgtctt agttaggctt aaactagagc tctaaatata 1501 tgttaccagc ccgtcggggc aaacgagacg atgtttaagt ttaaa