PREDICTED: Drosophila takahashii signal sequence receptor subunit 1

LOCUS       XM_017157492            1823 bp    mRNA    linear   INV 09-DEC-2024
            l(1)G0320 (l(1)G0320), mRNA.
ACCESSION   XM_017157492
VERSION     XM_017157492.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017157492.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1823
                     /gene="l(1)G0320"
                     /note="signal sequence receptor subunit 1 l(1)G0320;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:108068089"
     CDS             133..1041
                     /gene="l(1)G0320"
                     /codon_start=1
                     /product="translocon-associated protein subunit alpha"
                     /protein_id="XP_017012981.1"
                     /db_xref="GeneID:108068089"
                     /translation="MRHLMFLMLMVLPIVICTFSSPNKFGAYAAEPVEDDLVDVDGEE
                     GAVTGEDAEADEDSDTGSSSSPNADTYLLFTKPLYTPGQQLDLPGGKPVEFLIGFTNK
                     GAEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRP
                     FGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYVLLAGIVVLLLVIGQ
                     QYLLGSSGKRKRAAAKKVIETGTANDSTIDYDWVPQETLRALQKSPPKSKTPKTSPKP
                     GKQASPKAASQQSPKQRKVKRSAGDD"
     misc_feature    154..1038
                     /gene="l(1)G0320"
                     /note="Translocon-associated protein (TRAP), alpha
                     subunit; Region: TRAP_alpha; pfam03896"
                     /db_xref="CDD:461085"
     polyA_site      1823
                     /gene="l(1)G0320"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccgcgccgct cgtcgtcact ctttcatttt cactcgatcg cgaaggttgt gtgtgcgtgt
       61 gcgttttttc ccccagccga tttcccagcc gaatttccgt gtgtgcttgt gaagaaaaca
      121 acggccgaca agatgaggca tctgatgttc ctaatgctga tggtcctgcc catcgtcatc
      181 tgcaccttct cctcgcccaa caagttcggt gcctatgccg ccgagcccgt ggaggacgac
      241 ctggtcgatg tggacggcga ggagggagcg gtgaccggcg aggatgcgga ggcggacgag
      301 gacagcgata cgggcagcag tagttcaccg aatgcggaca cctatctgct cttcacgaaa
      361 cccctgtaca cgcctggcca gcagttggat ctgcccggcg gcaagcccgt cgagttcctc
      421 atcggattca ccaacaaggg agccgaggag tttgtgatcg agacggtgga ggcctctttc
      481 cgctatccca tggacttcaa ctacttcatc cagaacttct cggcggtggc ctacaatcgt
      541 gaggtgaagc ccggcttcga atcgacggtg tcgtacacct tcctgccctc ggatcaattt
      601 gccggacgtc cctttggact gaacattgca ctggcctatc gcgatgccaa tggcattcag
      661 tacaacgagg ctgtcttcaa tgagaccgtg ctgatttccg aggttgacga gggactcgat
      721 ggcgagacct tcttcctgta cgtcctgctg gccggcattg tggtcctcct actggtcatc
      781 ggacagcagt atctgctggg cagctcgggc aagaggaagc gtgccgctgc caagaaggtg
      841 atcgaaactg gaacggccaa cgatagcacc atcgactacg attgggtgcc acaggagacg
      901 ctgcgggcgc tgcagaagtc gccgcccaag tccaagacgc ccaagacctc gccgaagccc
      961 ggcaagcagg ccagtcccaa ggcggccagc cagcagagtc ccaagcagcg caaggtcaag
     1021 cgttccgctg gcgatgatta ggtttccaat ccgctcaaga ctgccacata tcccgaagag
     1081 aagaagaaca ccaataaaac ggcagcaaga tcagccgaag cagcagcagc agcaacagca
     1141 aactacattt tcatcctgca gggagcagag cagagcatac agtttcgtaa ttaattagtt
     1201 atgcgcatga atcatgttcg agatcatctc tagaaatact atcataattt ttttttcgtc
     1261 tatcgagaga ttgttagtct ttaaacgaac gtttccacag atttgtttta gaaatttgaa
     1321 ctttgaaatg cccaactgca cacatactcc aaacaaaaca aaaaaaacta taaaaaaaaa
     1381 cataccaaca aaaatgtaac ctaaagaaat tcttttgtga aattgtcttc gtttgttgaa
     1441 gacacacatt atagagagcg aagaagaaga gcagcttaaa gaatgagccg tcgatctaaa
     1501 aaaaaaaggg aatatcaagc gaaaagtgga agcgagtccc attaattgag gtgtaagaca
     1561 agaaaacctt ccaattgtac gatacattta aattagtcct attattacaa atcaattgat
     1621 ggccttttgt gttttatttt acgtttgccc ccatccatat aatttcaaac ttgattgtca
     1681 ttctttttct gttaggaacg aacgatgttg gagtgagttt tttttttagc tagagaagtc
     1741 gcaggaagtc gaccgatgaa taaagagaaa ttttcttacg acaaaaacaa aaaacaacaa
     1801 taaaatttga aaaaaaatat aaa