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LOCUS XM_017157478 2309 bp mRNA linear INV 09-DEC-2024 subunit (cactin), mRNA. ACCESSION XM_017157478 VERSION XM_017157478.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157478.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2309 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2309 /gene="cactin" /note="cactin, spliceosome C complex subunit; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108068079" CDS 101..2206 /gene="cactin" /codon_start=1 /product="splicing factor Cactin" /protein_id="XP_017012967.2" /db_xref="GeneID:108068079" /translation="MPKEKSKSRHRSRSRERRDHRSPEARSSRSSGNRDRDRRDHKDK DRRREKDKQDSKREHKSRRRRSSSSSSSSNSSSNAAHRSPLAKSSMKLLQTLEARRLV EQKDRQRRKDELKAQETPEEKRARRLREKQAKEQRRRERMGWDNEYQTYSNEDNPFGD SNLTSTFHWGKKLEVEGLSNLSSKTVEVLSLQKQLENRRELEKVKKRRQERELERQVR EDDLMMQQRAKEAVQFREWQRQEDQFHLEQARLRSEIRIRDGRAKPIDLLAQYVAAGN APLEESLEMQMHEPYVLLNGLPMEELEDLLVDIKVYEELEQGKHIDFWNDMITIVQDE LQRQQKLQAETQSLNQRRDGIHQAVVKDVADIFRGKNAQQLEEMRQRIEAKISGRADG VDISYWESLLSQLKAHMARARLRDRHQSLLREKLLLLKRENEDETTQEEVPPPVKEEE QQMDTQSEVEEAPSEEDDPLKELRDAVRLYQAGNYSPRYIREEEFTGRRVQNEEDDEP EAEGALYEEEDDERRTQRQRLLILHPERVDTNHLTPQELRMRNEARQGMQGDEAEFSV ETTLDAVPQLATDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIF YPDLMDKSQTPQYFLTPCADNGDFAVLRFHTGPPYEDIAFKIVNREWEFSYKRGFRCQ FHNNIFQLWFHFKRYRYRR" misc_feature 779..1354 /gene="cactin" /note="Conserved mid region of cactin; Region: Cactin_mid; pfam10312" /db_xref="CDD:463049" misc_feature 1835..2203 /gene="cactin" /note="Cactus-binding C-terminus of cactin protein; Region: CactinC_cactus; pfam09732" /db_xref="CDD:401611" ORIGIN 1 tgttcccagc tgcctatcga taaccgccgt tcgactgcat tgttttttgt tatatttcac 61 aattcccccg gatttccgcc agaaatcccc cgcagaaagg atgcccaagg agaagagcaa 121 gtcccgccat cgcagccgca gccgggaaag gcgggatcac cgcagtccgg aggcgaggag 181 cagcaggagc agcgggaaca gggatcgcga tcgcagggac cacaaggaca aggatcgccg 241 cagggaaaag gacaagcagg acagcaagcg ggagcacaag agcaggcggc gcaggtcctc 301 cagctcatcc tcctcctcta actcctcctc gaacgcagcc caccgctccc cactggccaa 361 gagctcgatg aagctgctcc aaactctaga agcccgccgc ctcgtcgagc agaaggaccg 421 gcagcggcga aaggacgagc tgaaggccca ggagacgccc gaggagaagc gcgcccgccg 481 tttgcgcgag aagcaggcca aggagcagcg gcgtcgcgag cggatgggct gggacaacga 541 gtaccagacg tactccaatg aggacaaccc ctttggcgac tccaatttga cctccacctt 601 ccactggggc aagaagctcg aggtggaggg cctctccaat ctgtccagca aaacggtgga 661 ggtgctgtcg ctgcagaagc agctggagaa tcgccgcgag ctggagaagg tgaagaagcg 721 tcgccaggaa cgcgaactgg aacggcaggt gcgcgaggat gacctgatga tgcagcagcg 781 cgccaaggag gccgtgcagt tccgcgaatg gcagcgccag gaggatcagt tccacctgga 841 acaggctcgt ctgcgcagcg agattcgcat tcgcgatggc cgcgccaaac ccatcgatct 901 gttggctcaa tatgtagccg ccgggaatgc gccgctcgag gaatccctcg agatgcagat 961 gcatgaaccc tatgtcctgc tcaatggcct gcccatggag gagctggagg atctgctggt 1021 ggacatcaag gtctacgagg agctggagca gggcaagcac attgatttct ggaacgacat 1081 gatcaccatt gtgcaggacg aactgcagcg ccagcagaag ctgcaggcgg aaacgcagtc 1141 gctcaaccag cgacgcgatg gcatccacca ggcggtggtc aaggatgtgg ccgacatctt 1201 caggggcaag aatgcccagc agctggagga gatgcgccag cgcatcgagg ccaaaatcag 1261 cggaagagcc gatggcgtgg acatcagcta ctgggagagc cttctctcgc agctgaaggc 1321 gcacatggcc cgcgctcgac tgcgcgatcg ccatcagtcg ctgttgcgcg agaagctgct 1381 gctgctgaag cgcgagaacg aggatgagac gacgcaggag gaggtgccgc cgccggttaa 1441 ggaggaggag cagcagatgg acacccaatc ggaggtagag gaagctccct ccgaagagga 1501 cgacccgctg aaggagctac gcgacgcagt gcgcctctac caggcgggca actacagtcc 1561 gcgctacata cgcgaggagg agttcaccgg gcggcgcgtg cagaacgagg aggacgacga 1621 gccggaggcg gagggcgctc tctacgagga ggaggacgac gagaggcgaa cccaaagaca 1681 gcgcctgcta atcttgcacc ccgaacgcgt ggacaccaac catttgacgc cgcaggagct 1741 gcgcatgcgc aacgaggcgc ggcagggaat gcagggcgac gaggccgagt tcagtgtgga 1801 gaccacgctg gatgcagtgc ctcagctggc cacggataag taccgaccga ggaagccgcg 1861 ctacttcaat cgcgtgcaca ccggattcga gtggaacaag tacaatcaga cgcactacga 1921 catggacaat ccgccaccga aaatcgtgca gggctacaag ttcaacatct tctatccgga 1981 tttgatggac aagtcgcaga cgccgcagta cttcctcacg ccctgcgcgg ataatggtga 2041 ctttgccgtg ctgcgcttcc acaccgggcc gccgtacgag gacatcgcct tcaagatcgt 2101 caaccgcgag tgggagttca gctacaagcg cggcttccgc tgccagttcc acaacaacat 2161 ctttcagctc tggttccact tcaagcgata tcgctacagg cgttgaggcg attgtatatt 2221 atcgcaatgg aacctcatca tttttttgta gcccttattt taatgtccca aataaaatgt 2281 aagaacataa ttctttggaa gaggtattg