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LOCUS XM_017157475 2384 bp mRNA linear INV 09-DEC-2024 acyltransferase (LPCAT), mRNA. ACCESSION XM_017157475 VERSION XM_017157475.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157475.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2384 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2384 /gene="LPCAT" /note="lysophosphatidylcholine acyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108068077" CDS 321..1937 /gene="LPCAT" /codon_start=1 /product="lysophosphatidylcholine acyltransferase" /protein_id="XP_017012964.1" /db_xref="GeneID:108068077" /translation="MTTSTIKPTGGEEVPPAGVKGGVGGMGGVGDVGVAASLSKRDSE EDTWASKGYNYINPFVHRIEIDSHIEVAKIYVLTVLLLPIRVVGCVLSLISAWMFACI GLYGMTLDDLKEKPLTGWRKQMQCMTACGMRMVYTFGSFHYVTMKGRAATPKEAPILV VAPHSSYVDSILVVASGPPSIVAKRETADIPLLGRIINYAQPIYVQREDPNSRQNTIR DIVDRARSTDDWPQVVIFAEGTCTNRTALIKFKPGAFYPGVPVQPVLLKYPNKYDTFT WTWDGPGVLRLLWLTMTQFYNRCEIEYLPVYTPSEDEVADANLYANNVREVMAKALGV PTSDYSFEDVIVMSRARDMKIPFPGDIVEIERTIEKLGLIESQRDAELCKGFLRLSNT DRLDIITFGELLQVDLKNTNLHKLFALLDHRRMGTVSLKSFLLCSLFCKLKNSDLLTF LRALIHLYSESSQQIDRESFVRLMRHAGGKLNEQKAQALFYALDTDNLGYVSFDAFVE HTEKQKSSYKFLYHKSEHIRRPKAVTTPAN" misc_feature 714..1352 /gene="LPCAT" /note="Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like; Region: LPLAT_LPCAT1-like; cd07991" /db_xref="CDD:153253" misc_feature order(810..812,819..821,825..827,867..878,1035..1043) /gene="LPCAT" /note="putative acyl-acceptor binding pocket [active]" /db_xref="CDD:153253" misc_feature 1539..>1853 /gene="LPCAT" /note="Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]; Region: FRQ1; COG5126" /db_xref="CDD:444056" misc_feature 1701..1859 /gene="LPCAT" /note="EF-hand domain pair; Region: EF-hand_8; pfam13833" /db_xref="CDD:404678" polyA_site 2384 /gene="LPCAT" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgcagtgcga gtttgcaaaa cgtattttgt tgttgtgttg tgttcgaggg aatccaataa 61 ctatactatg ggatatatgg caccgcttgg cacgcgaata taaaccgaat aaattcgaat 121 aagcggaatt caaaagcgaa aaccactcga aaagcggcgg tcgagagaga gtgaccagtg 181 aatatcgaac caccattgtt attattatta ttattttatc attttttttt taaccgctgt 241 gcgggagtgg aagtgcgtgg tgtgatacta aagtgagaga aagaagtgat tgagaagaaa 301 aagaagaaaa acggggggca atgacaacgt cgacaattaa gccaacgggc ggcgaggaag 361 tgccgccggc gggggtgaag ggcggcgtgg gcggcatggg cggcgtcggc gatgtgggag 421 tggccgccag cctgtcgaaa cgggactccg aggaggatac atgggcctcc aaggggtata 481 actacataaa tccgtttgtc catcgcatcg aaatcgacag tcacattgag gtggccaaga 541 tctatgtgct gacagtgctg ctgctgccca tccgcgtggt gggctgcgtc ctctccctga 601 tctccgcctg gatgtttgcc tgcattggac tctatggaat gacgctggat gatctcaagg 661 agaaacccct caccggctgg cggaaacaaa tgcaatgcat gacggcctgc ggaatgcgca 721 tggtctacac cttcggttcg ttccactatg tgaccatgaa gggtcgagcg gcgacgccga 781 aggaggcacc cattctggtg gtggcgccgc actcctccta cgtggactcc atcctggtcg 841 tggccagtgg cccgccctcg atagtggcca agcgggagac ggcggacatt ccgctgctcg 901 ggaggatcat caactatgcc cagcccatct atgtgcagcg cgaggatccc aattcgcgac 961 agaacaccat cagggacatt gtggaccggg ctcgctccac ggacgactgg ccacaggtgg 1021 tcatcttcgc cgagggcacc tgcaccaatc gcaccgccct gatcaagttc aagccgggtg 1081 cattctatcc cggagtgccc gtgcagccgg tgctcctcaa gtatccgaac aagtatgaca 1141 ccttcacttg gacctgggac ggaccgggag tgctacgact tctctggctg acgatgacgc 1201 agttctataa ccgctgcgag atcgagtatc tgcccgtcta cacgccgtcg gaggacgagg 1261 tggccgatgc caatctgtat gccaacaatg tgcgcgaggt gatggccaag gccctgggag 1321 tacccacctc ggactattcc ttcgaggacg ttatcgtgat gagtcgggcc cgcgacatga 1381 agatcccctt tcccggcgac atcgtggaga tcgagcgcac gatcgagaag ctgggcctga 1441 tcgagagcca gcgggacgcg gagctgtgca agggcttcct ccggctgtcc aacacggaca 1501 ggctggacat catcacgttt ggggagctgc tccaggtgga tctgaagaat accaatctgc 1561 acaagctctt cgccctgctt gatcaccgcc gcatgggcac tgtgagtttg aagagcttcc 1621 tgctctgctc cctcttctgc aaactgaaga attccgatct tttgaccttc ctgcgggccc 1681 tgatccatct gtatagcgaa tctagtcagc aaattgacag ggaaagcttt gtgcgattaa 1741 tgagacatgc tggcggcaag ctaaatgaac aaaaagccca ggcgctcttc tatgcgctgg 1801 atacggacaa cctgggctat gtctcctttg atgcctttgt tgagcacacg gaaaagcaaa 1861 agtcaagcta taaattcctc tatcacaaat cggagcacat aaggcgaccg aaggcagtca 1921 caacgcccgc caactgaaga gggagcaccg atttttttgg aggattctgg aagacgcgag 1981 gagtagtaac caagagaaaa agaacctaca cctaaaccta aaccaaccta agcagaaagt 2041 tcaactgtcg agtgtatatt tttaatattt atttatcgtg tagcgcgtgt cctggcaccc 2101 cccatatatt gtaattaata ttatttctat tattattacc atagtttcgt tttgtgaaca 2161 acattgctca cagcaccgag atccggatct tattgcgccc agctttgtta ttatttatac 2221 tcggactcta aacgcaagtc atttcatctt tgtgattctt attatacaca cttacgttat 2281 atatacactt aaatattaaa gcatatataa agaagtatgt atcttatgta gaggcaggca 2341 aggcatgaat atttcccata tttccatggc caaaaaaaga gaaa