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LOCUS XM_017157460 1874 bp mRNA linear INV 09-DEC-2024 (Bap60), mRNA. ACCESSION XM_017157460 VERSION XM_017157460.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157460.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1874 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1874 /gene="Bap60" /note="Brahma-associated protein 60; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108068068" CDS 122..1693 /gene="Bap60" /codon_start=1 /product="brahma-associated protein of 60 kDa" /protein_id="XP_017012949.2" /db_xref="GeneID:108068068" /translation="MSQRFAPGQAPVQSRYQPPPPAPGMRPYPPPGATFPPRGFPLHP NTTQPVPGTANVAGVPGGVPGVPGVPGPSLLQRAAQQPAFQSGLRGTGAAGGGVGSGG GSKRSNESRSLGGGGGGGGGGGGKGDFVSAKKKKKLADKILPQKVRDLVPESQAYMDL LTFERKLDATIMRKRLDIQEALKRPMKQKRKLRIFISNTFYPSKEPTNDGEEGAVASW ELRVEGRLLEDGKGDPNTKIKRKFSSFFKSLVIELDKELYGPDNHLVEWHRTHTTQET DGFQVKRPGDRNVRCTILLLLDYQPLQFKLDPRLARLLGVHTQTRPVIISALWQYIKT HKLQDAHEREYINCDKYLEQIFSCQRMKFAEIPQRLNPLLHPPDPIVINHFIESGAEN KQTACYDIDVEVDDTLKNQMNSFLMSTASQQEIQGLDTKIHETVDTINQMKTNREFFL SFAKDPQMFIHRWIISQTRDLKLMTDVVGNPEEERRAEFYYQPWTHEAVSRYFFTKVN QKRAELEQALGIRNG" misc_feature 1028..1258 /gene="Bap60" /note="SWIB domain found in BRG1-associated factor 60A (BAF60A) and similar proteins; Region: SWIB_BAF60A; cd17674" /db_xref="CDD:349493" misc_feature order(1085..1087,1094..1099,1103..1108,1115..1120, 1133..1135,1148..1153,1157..1159,1208..1210,1217..1222) /gene="Bap60" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:349493" polyA_site 1874 /gene="Bap60" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gacgccattt tacaggcgaa attgtgtgtg tgacgcgttg ttgtattgaa acaaaaagcg 61 ctgaaaatcc attttccgcg agtgttaaag ggcggaaaag cgaaaggagc gactagagaa 121 gatgtcgcaa cgcttcgcac ctggccaagc gccggtgcaa tcgcgctacc agccaccgcc 181 gccggcgccc ggcatgcgtc cctatccgcc gccaggcgcc acttttccgc cccgtggttt 241 tcccctgcac ccgaacacca cgcaaccggt gccgggcaca gcgaacgtgg ccggagtgcc 301 gggcggagtt cccggtgtgc ccggcgttcc ggggccttcg cttctgcagc gcgccgccca 361 gcagccggcc ttccagagcg gcctgcgcgg cacgggcgcc gccggcggtg gcgtgggctc 421 cggcggaggc agcaagcggt ccaacgagtc gcgcagcctg ggcggcggcg gcggtggagg 481 cggcggcggc ggcgggaagg gcgacttcgt gagcgccaag aagaaaaaga agctggcgga 541 caagatactg ccgcagaagg tgcgcgatct ggtgcccgag tcgcaggcgt acatggatct 601 gctgacgttc gagcggaagc tggacgccac catcatgcgc aagcgcctgg acatccagga 661 ggcgctcaag cgaccgatga agcagaagcg caagctgcgc atcttcatct cgaacacatt 721 ctatcccagc aaggagccga ccaacgatgg cgaggagggc gccgtcgcct cgtgggagct 781 gcgcgtggag ggacggctcc tggaggatgg gaagggcgat cccaatacaa agatcaagcg 841 caagttctcg tcgttcttca agtcgctggt catcgagctg gacaaggagc tgtacgggcc 901 ggacaaccat ctggtcgagt ggcatcgcac ccacaccacc caggagacgg acgggttcca 961 ggtgaagcgg ccgggcgacc gcaatgtgcg ctgcaccatc ctcctgctgc tcgactacca 1021 gccgctgcag ttcaagctgg atccgcgcct agcgcgcctg ctgggcgtgc acacgcagac 1081 gcggccggtg attatctccg ccctgtggca gtacatcaag acgcacaagc tgcaggatgc 1141 ccacgagcgg gagtacatca attgcgacaa gtatctggag cagatattca gctgccagcg 1201 catgaagttc gccgagatac cgcaacgcct caatccgctg ctccatccgc cagatccgat 1261 tgtaatcaat cactttatcg agagcggtgc ggagaacaag cagaccgcct gctatgacat 1321 cgatgtggag gtcgatgaca cgctcaagaa ccagatgaac agcttcctga tgagcaccgc 1381 cagccagcag gagatccagg ggctggacac gaagatccac gagacggtgg acaccattaa 1441 ccagatgaag acgaacaggg agttcttcct gagcttcgcc aaggatccgc agatgtttat 1501 ccaccgctgg atcatcagtc agacgaggga tttgaagctc atgaccgatg tggtgggcaa 1561 tccggaggag gagcgccgcg ccgagttcta ctaccagccg tggacgcacg aggccgtttc 1621 gcgctacttc ttcaccaagg tcaaccagaa gcgggccgag ctggagcagg cgctgggcat 1681 ccgcaacggc tagaaggagc cagcagtcaa ctcgtggaag cggcaaactc tttttccttc 1741 gccagtttag tttaagctta aaatacatcc cttttttcgt cgtccccaag aaatacacac 1801 gcatccagca caaatattgg acttaacagt aggctaataa agtggcatac gcatataaaa 1861 agcaaaatta caaa