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LOCUS XM_017157454 5139 bp mRNA linear INV 09-DEC-2024 (Ranbp21), transcript variant X2, mRNA. ACCESSION XM_017157454 VERSION XM_017157454.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157454.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5139 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5139 /gene="Ranbp21" /note="exportin-5-like protein Ranbp21; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068061" CDS 543..4253 /gene="Ranbp21" /codon_start=1 /product="exportin-5" /protein_id="XP_017012943.2" /db_xref="GeneID:108068061" /translation="MAQLGGTEALAAELATAVDLIMHPHTQQQARLEAYMACERFKEE SPLCAQVGLFLASSPQSNQQVRHFGLQLIEYTIKFRWNCITHEEKVYIKDNAIKMLNV GVGPAEDRTLLPTKDALSRIIVEMIKREWPQQWSDLLPELSQACTKGEAQTELVLLVF LRLVEDVALLQTIESNQRRKDMYQALNNNMNDIFEFFLRLVEQHVTAFRETKASAHSR VVEMVLLTLSGFVEWVSIQHIMSSNGKLMHFLCILLNDKAFQCNAAECLAQITNRKGQ AKERKPLLQLFNEEPLRYIYQASQIPPDSSSSLAIEQHHNFLKKLLQVLNGMAQQLVA LWGKDDATQRPVHLEVLLECLLLLTQHPSLSVAHGAALIWQLLLKHEPCSKDFAMVNY IPKLIHTIAPRIVKLPYPSASGSSNSLSTEAYIRLEYDSEEEFALYFFRCRTDFLEIF RLATLVQPLVTYGYCEQWLQQRLRNAVAEADAEVKSGSVSCSVLDPVYLEWDALVSVL DGVLSRILLVAERPSVPAGLRLLEDCLKLETINPLIYSILLSCISALFVFLSMSACQI TATNCVAMSGVSLLPRVLDKIFRALVLKPPNELEKVQAKSAKNLRRHAASLLVKLAHK YPLLLLPVFEQINGHVELLLKEPGQHQLCRLMRTTLQEALILISNHFCDFERQTLFIE HILRDKRTEWLAFGEALKSPLDFMSFVGLDKPPIFAVEGAPSLQNRSRLLDALHVVLG VVKRCTWPDDPDRAQRGGFVIGCTELGNPICRNPATKHVVPLLSHVLSLMRVLNELFA PEALLALSEGYRGIHGMLEHEKKLLMGICALPTDPLDATIRSEPTAFEKMQTFMMMIT EGCYHLMGSAGPSLGRDLYQLLGLSDAIITNVFSRMDVVPDYRLRPIIRVFFKPFVYS CPPSFYDSVLVPLFAHLAPLMCERLTRRWIYIASLYESGQLNGEVNDTQEVLEDQLNR TLTREYLDVLKIALVGGQIGADHVASGANANSHSVAMENEEHSMDSAPQSRASQSALL SDIISDLGGKLLRNGLIGNYVLMTLLKAIAWNDGMCSMKAVNIAAPVMRFLAAEKLMD ENKAVTAFTAVLQGMQVHGQHEANQSGLVTLGVQFYELLRPQFPILSEVLQHIPSVNA ADIQKFDEKIAVAPVKGNKVDRAKKDIFKKLTVQLVGRSVNQLFRHEVQIANLPPMQS MHKGAKGSSTTSGDIMDSNQNASLARLFGAEK" misc_feature 642..845 /gene="Ranbp21" /note="Importin-beta N-terminal domain; Region: IBN_N; pfam03810" /db_xref="CDD:397745" misc_feature 888..1343 /gene="Ranbp21" /note="Exportin 1-like protein; Region: Xpo1; pfam08389" /db_xref="CDD:462459" misc_feature 1476..4109 /gene="Ranbp21" /note="Exportin-5 family; Region: Exportin-5; pfam19273" /db_xref="CDD:437105" polyA_site 5139 /gene="Ranbp21" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cggcaatact ccaacagtct ggcaacccca caggattgcg aaaatatcgc gcgagtttcg 61 taagaaattt cgccggttcg ccagggtaaa cagtttaacc caaagacagc cttaagtgca 121 aatagaaggc gttgcattta actcatttac atagttataa agcccagtaa aagtcgccca 181 gttagtgccc tgcagatctg gcaacttccg cgcgccgcct gtcaaccctg tcaacccgtg 241 cgatttgtgc ctgcacattg ttctaaaaca acccagccgg aaaagccgtt ttagcagcgg 301 gcccttaatc tatatgctcc tcagatgtga gacaccccct cgcgcggctg tgttctccag 361 gcaataggcg ctaccgaggg tgaaggatta ctatttccag cagcattaat cccgaccaga 421 actctcgagc atttcgcatt tcgcacacac acacacacgc acgcacactt ggatagcgct 481 cctaatcttt ggcaacgggg atcgagaggc taggcagcag gaggagtagc agcagccagg 541 agatggccca gcttggaggc accgaggctc tggccgccga actggccacc gccgtggatc 601 taatcatgca tccgcacacc cagcagcagg cgcgtctgga ggcctacatg gcctgcgagc 661 gcttcaagga ggagtcgccg ctgtgcgccc aggtgggcct attcctggcc agctcgccgc 721 agtccaatca gcaggtgcgt cactttggcc tccagctgat cgagtacaca atcaagtttc 781 gctggaactg cattacgcac gaggagaagg tgtatatcaa ggacaatgcc atcaagatgc 841 tgaatgtggg cgtgggtccc gcggaggatc gcaccctgct gcccaccaag gatgccctgt 901 cccggatcat tgtggagatg atcaagcgcg agtggccgca gcagtggtcc gatttgctgc 961 ccgaattgag tcaagcttgt actaaaggag aagcccaaac ggaactcgtt ctcctggtct 1021 tcctgcgcct cgtggaggat gtggctctcc tccagaccat cgaatccaat cagcgacgca 1081 aggacatgta ccaggcactc aataacaaca tgaacgacat ctttgagttc ttcctgcggc 1141 tcgtggagca gcatgtgacc gcctttcggg agacgaaggc aagtgcccat tcgcgggtcg 1201 tcgaaatggt gctgctcacg ctgagcggct tcgtcgagtg ggtgagcatt cagcacatca 1261 tgtccagcaa cggcaagctg atgcacttcc tgtgcattct gctcaacgac aaggcattcc 1321 agtgcaatgc ggccgagtgt ctggcgcaga tcacgaatcg caagggtcag gcgaaggaga 1381 ggaagccgct gctgcagctg ttcaacgagg agccgctgcg ctacatctac caggcgagtc 1441 agattccacc ggattctagt tcatccctgg ccattgaaca gcatcacaac tttctgaaga 1501 agctgctgca ggttctgaac ggcatggctc agcagttggt ggcgctgtgg ggcaaggatg 1561 atgccaccca gcggccagtt catctggagg tgctgctcga atgcctcctg ctgctcaccc 1621 agcatccttc gctgagtgtt gcgcacggag cggcgctcat ctggcagctg ctgctgaagc 1681 acgagccctg ctcgaaggat ttcgcgatgg tcaactacat tcccaagctc atacacacga 1741 ttgcgccgcg tatcgtgaag ctgccatatc ctagcgcctc cgggagctcc aacagcctct 1801 ccacggaggc ctacattcgc ctggagtacg acagcgagga ggagttcgct ttgtacttct 1861 ttcgctgccg caccgacttc ctggagatct tccgtttggc cacgctcgtt cagccgctcg 1921 tgacctacgg ctactgcgag cagtggctgc agcagcgcct gcgcaacgcc gtcgccgagg 1981 cggatgcgga ggtcaagagc ggcagtgttt cgtgcagtgt cctggatcct gtctacctcg 2041 aatgggatgc cttggtgagc gttctggatg gcgttctcag tcgcatactc ctcgtggccg 2101 agcggccctc ggtgcccgct ggtctgcgac tgctggagga ttgcctcaag ctggagacca 2161 tcaatccgct catctactcc atactcctct cctgcatttc ggcgctcttt gtctttctca 2221 gcatgtccgc ctgccaaatt acggccacca attgtgtggc catgagtggc gtaagtctac 2281 tgcctcgcgt gctggacaag atattcagag cgttggtttt gaagccaccc aatgaactgg 2341 agaaggtgca ggccaagtcg gccaagaatc taaggcgtca tgctgcctcg ctgttggtca 2401 aactggccca caaatatccg ctgctcctgc tgcctgtttt cgagcagatc aacgggcatg 2461 tggagctgct gctcaaggaa ccgggacagc atcaattgtg ccgcctgatg cgcaccacgc 2521 tgcaggaggc gttgatactg atctcgaatc atttctgtga ctttgagcgc cagacgctct 2581 tcatcgagca cattttgcgg gacaagcgca ctgagtggct ggcctttggc gaggctttga 2641 agtcgccgct ggactttatg agcttcgtgg gactggacaa gccgcccatc tttgcggtgg 2701 aaggagctcc ctcgctgcag aatcgttcgc ggctgctgga tgctttgcat gtggttttgg 2761 gcgtcgtcaa acgatgcacc tggccggatg atccggatcg cgcccagcgt ggaggcttcg 2821 tcattggctg cacggaactg ggcaatccca tttgccgcaa tccggccacc aagcatgtgg 2881 tgccgttgct ctcacatgtc cttagtctca tgcgagtgct aaacgagctc tttgctccgg 2941 aggctttgct cgccctgtcc gaaggctatc gcggcatcca cgggatgctg gagcacgaga 3001 agaagctgct gatgggcatc tgtgctctgc ccaccgatcc gctggacgcc acaattcgca 3061 gcgaaccgac ggcgttcgaa aagatgcaga cattcatgat gatgatcacc gagggctgtt 3121 accatctgat gggctccgcg ggtccttcgc tgggcaggga tctctaccag ctgctgggtc 3181 tctcggatgc cattataacg aatgttttta gccgcatgga tgtggtgccc gactaccgat 3241 tgcgtcccat catccgggtc ttcttcaagc cctttgtcta ctcgtgcccg cccagctttt 3301 atgacagtgt tttggtgccg ctctttgctc atttagcccc cctgatgtgc gaaaggctga 3361 cgcgtcgctg gatctacata gcctcgctgt acgagagtgg tcagctgaat ggcgaggtca 3421 acgacacgca ggaggtgctg gaggatcagc tgaatcgcac gttgactcgc gaatacctgg 3481 atgttttaaa gattgccctg gtgggcggcc aaattggagc ggatcatgtg gcgtccggcg 3541 cgaatgccaa cagccattcg gtggccatgg agaacgagga gcattccatg gacagcgcac 3601 ctcagtcaag ggccagtcaa tctgccctgc tttccgatat tataagcgat ctgggaggca 3661 aactgctgcg caacggactg atcggcaact atgtgctgat gaccctgcta aaggcgatcg 3721 cctggaacga tggaatgtgc agcatgaagg cggtgaatat agcagcgccc gtgatgcgtt 3781 tcctcgcggc cgaaaagctg atggatgaga acaaggcggt gaccgctttt acggccgttc 3841 tgcagggcat gcaagtgcat ggacagcacg aggccaatca gtcgggactc gtcaccctgg 3901 gcgtgcagtt ctacgagctg ctgcgtcccc agttcccgat cctcagcgag gtgttgcagc 3961 atattcccag tgtaaatgcg gcggatatac aaaagttcga tgagaagatc gccgtggcgc 4021 cggtgaaggg aaataaagtg gatcgtgcga agaaggatat cttcaagaag ctcaccgttc 4081 agctggtggg acgcagcgtg aatcaattgt tccggcacga agtgcagata gccaatctgc 4141 cgccaatgca gtcgatgcac aagggcgcga agggcagctc gacgacgagc ggcgacatca 4201 tggatagcaa tcagaacgcc agtctggcca ggctctttgg ggcggaaaag tgacaacagg 4261 gagcgcagca ggagaagcac aggaaaccga ggaggaggag gaggagcaac tcgctccagg 4321 atccaggcgg agtcgagacc acggccacct cagctgccaa actagcgacg actgaactta 4381 aagtaattgt aaactagctt agacgagtcc tcctgtcccc gaaaatccca gtcgaaagtt 4441 ccagtttgaa tcagatccta aaatctaaac taatttattt attttacgaa actaaattta 4501 acacacaacc ccgcgcgcat gtaacgattc tttattttcc ggtcgctctc ccttgttact 4561 gctttgttat ttattattcg gaatttgtta agcttgtttt tttgcacaaa ggaaaagtag 4621 aaccatcgat aattgacaat actccgacct ttgatccttg atccttccta cgccaccaga 4681 agtccctttt tatacatagt taattaatta attaatcaat tgtgcttttc cccccccgtt 4741 ttgtatagtt acctatgcgc tggcatactg taatttatat acatatatat atacgatatg 4801 tacacattta tcctttgaag aaacatttct gaaattacgc ttaggcttag ttgataggca 4861 acgagttatt attatataat acatcaatct gtatatgaac acacatcccg caccgcatat 4921 gcatatgcca atgcctatgc aatatatacc caaaactccc caaaaaaaaa agaaacatcg 4981 ggattctaag aattaaagtt gcgcgagtat gtaatattca aagtgaaaat tatgtactac 5041 tatttataac taaatgaaat cgaagcggga cgaccccgca aaaacacaaa atcgaaataa 5101 gctaataaat ttgaaataaa tttacaaatt cgaaatgaa