Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017157453 6348 bp mRNA linear INV 09-DEC-2024 factor 1 homolog (Elys), mRNA. ACCESSION XM_017157453 VERSION XM_017157453.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017157453.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6348 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6348 /gene="Elys" /note="AT hook containing transcription factor 1 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068060" CDS 124..6165 /gene="Elys" /codon_start=1 /product="protein ELYS homolog" /protein_id="XP_017012942.2" /db_xref="GeneID:108068060" /translation="MEWHEVELDGSRSAAFPERAVPGFGQDLQDSEYLGGIIRNGQLG WVTWRYGSDATILVCSMTTGDYVSYHRFWSSDSADESGDQLRTSIRCVEELHPGEPER TALLAICLESWDSRERRPENCSLARTQVLIYSIPGSKVLRRFDLPDNLYCTALTFLDQ RICGGTRLSKFDGCLAISTQEGIVLLVDLNADSLLERHRGGSELDPSHGQLYSFPSEE LGTQIDSILSDCREKGEHLAVRLDVATSGIQCLMGISLAPGFAAGLEDGRVLIYDLVQ FHVTTALQPPGKKDRWRGAVQSMCLIMPPDDPKPCFYICALYQSTEGLNMLLHSVSYR RSYVEPNDMLRFEHFHSSSVRNHQIFERGSGGCSVNACFTASTFSFAGDSGTLLVIIS WHSASEGKNKLVLFDINQWYKEEMPPCVRSHETPHYLAGYVLSGIPKGLSLQLRANSI MHFVSLQRYDEHFYPDSLTFDCTLLTPNGSRYYAQDGVQHRFLNALRWERATLFLRPQ SYHEDIVRLRLLPQFCELHPDATFSKTAMYEVILSVALEHQCIALLNDCARSWLDGSF MCNMIDPTELSLSTLTNWIVRRAGQIKRRCSELCQGIFDYGGYSLDERERREFQVLSG QLRELVRLQSYIVELGRRRLAPSMLTECQANERALQTVHQYQRVLYWFIEHGLLPEGQ QEHHQEKPLVLLRHIYAERRALGRKLYIDRLAEMASLSGEASYPPESLHSLLHVMLDP QTEVGNKQALILYLLMDLDARLFRRFQTAFQVKEELAKAVRSFWCLDSGDYEQCVVEL YKDPFPASKFEPWQMRLLLETLLNGGAIKAAMRVVSQPPGPLSSELHMNVLLANGSMP EAFLMARLYDDDQGQPLLERFFRHCIARGRFKVLAELCLSEEEERMLYRMLRQSRSRQ TDCVQLILLLQKSKFIEAVSFMDEVAEEREREDDSSSSTIISAYRSTMAPVAQNIAGT YLRIRDTLEMEEGRNPLQPFSCQLVKQNASGQVGGIFQSSAVSAHWATHFEEASLPAL PPKLGCYSNIPFLRHAQYGLAELPHRRRKVRPVPHQAVEKRQREEEEQRREERERRQQ YTLQPRKRRRLLAEQLVEEVKGHVQSLREEVKELEELDNQASDLLQPPTFLQTQRTRE RSSSPQAILTILKRKSTLEGAPPVATSTTLGGTKRFRFMPPIPLRLDGSMEVDRSRSS EEEEIQEEEEEETDEIIVEIESRSEEPGNVDSSEEEEEFLSPLASANVSLVEQRPPTG PQPRGSLLQGRTGESRNGSESSSGFGSFATAVAPSQTTSHSHFVPTVCSSKMGESTQI FSSGSRVVRISERTTICGEMESTDLGSAEVTGARSSQWSAAEIPAIQSGHRMMDTTLG MSTYEVASLEQQQPENQEEEEELKLEDATQQENLQQEEQQYQEPLSSPTYSLSSEESD LSSSAGLRNPLVPPPLHTDDPMYSIVVESTGSITTSRSVTHTPTSFLPSDTNVSQTSS PREAGNEGDDGKDGGSPISLYRANSLETVDDLDTTKGSLEEEEEYDEDDDCVIALDGT EVRGYVARPQQTVACSSAELFAFKEQEEGVASGVPCPSLSMGATVNSDSEVADTIVLD SDEEEEKKEEQQKQQEVLLMEEEAGSNDSVATVAFSETKQDMEIDVAVEEKQLEEIPE EEEEPERLAIQEEDSRQSLTLILSDDEEEQPVEVTPAEEEDQVEVAASKKEEQMEVAA SKEEDQVEAAASKDEEQTEAAASKDEDQVAATPAKEEDQVEVAASGEEEPAPLRSLRP RRGSSEHRDSPRPLRSRRSSMEHQDSPAPLAAGRRMRLRSNDAVSSPAVSSPAVATPK RRTMQHKHLLEVIDEQGSLDASLPRTRSRSRLSVDSEATPTQRARDKRATSLAPATES PSVRRSVRGNSEPPAAAVQPLRKQRKTRRTSATSEQSPSVSKEEVPLVVKEEEEAEQQ HEEEERPRLRRTARRRISDLSDQSSKGAATEAPAASSTRNRELRPRTRRSSKSEV" misc_feature <634..1560 /gene="Elys" /note="beta-propeller of ELYS nucleoporin; Region: ELYS-bb; pfam16687" /db_xref="CDD:465233" misc_feature 2242..2853 /gene="Elys" /note="Nuclear pore complex assembly; Region: ELYS; pfam13934" /db_xref="CDD:464050" misc_feature <5146..>5448 /gene="Elys" /note="cell envelope integrity inner membrane protein TolA; Provisional; Region: tolA; PRK09510" /db_xref="CDD:236545" misc_feature 5293..>6147 /gene="Elys" /note="transcriptional regulator ICP4; Provisional; Region: PHA03307" /db_xref="CDD:223039" ORIGIN 1 gctagctcac acacagtctc ccctctctca cacacactca gtcactcgga ataatcggtg 61 ttttattttt tgcgcgaatc tttcaaagga atcctcctgg tcaacggatg aactagccat 121 cccatggagt ggcacgaagt ggagctggac ggcagccgct cggcggcctt cccggagcgc 181 gcggtacctg gttttggcca ggatctgcag gattccgaat acctcggcgg catcatacgc 241 aacggtcagc tgggctgggt gacctggcgc tatggcagcg acgccaccat cctcgtttgc 301 agcatgacca ccggcgacta tgtgtcgtat catcgcttct ggagcagcga ttctgcggat 361 gaatcgggag atcaacttcg caccagcatc cgctgcgtgg aggagctcca cccgggcgaa 421 ccggaacgca ctgccctgct ggccatctgc ctggaatcgt gggacagccg ggaaagacgc 481 cctgaaaact gctcgctggc caggacgcag gtgctcatct attccattcc gggcagcaag 541 gtgctgcgac ggtttgacct ccccgataac ctctactgca ccgcgctgac ctttctggac 601 cagcgcatct gcgggggcac gcgactctct aagttcgacg gctgtttggc catttccacc 661 caagagggca tcgttctgct ggtcgatctc aatgcggaca gcctgctgga gaggcacaga 721 ggtggttctg agctggatcc ctcccacggg cagctgtaca gcttccccag cgaggagttg 781 ggaacgcaaa tagactctat cctaagcgat tgtcgggaaa agggcgaaca tttggctgtg 841 cgattggatg tggccaccag cggcatccag tgcctgatgg gcatcagttt ggctcccgga 901 tttgccgccg gtctcgagga tggtcgcgtt ttgatctacg acctggtgca gttccatgtg 961 accaccgccc tgcagccgcc gggcaaaaag gatcgctggc gtggcgccgt ccagagtatg 1021 tgcctcatca tgccgcccga cgacccaaag ccctgcttct acatatgcgc cttgtaccaa 1081 tccaccgaag gccttaatat gctgctgcat tcggtgagct accgccgctc ctacgtggaa 1141 ccgaacgaca tgctccgctt cgagcacttt cactccagtt cggtgcgcaa ccatcagatt 1201 ttcgagcggg gaagcggcgg ttgctcggtg aacgcctgct tcacagcctc cactttcagc 1261 tttgccggtg acagcggcac tctgctggtc atcatctcct ggcattcggc cagcgagggg 1321 aaaaacaagc tggtcctatt cgacattaat cagtggtaca aggaggagat gccgccctgc 1381 gtgcgcagcc acgagacgcc gcattatctg gccggctatg ttttaagtgg aatacctaaa 1441 ggattaagtc tacagctgcg cgccaatagc atcatgcact ttgtctccct gcagcgctac 1501 gatgagcact tctatcccga ttcgctgacc ttcgattgca cgctgctcac tccaaatggc 1561 agcagatatt acgcgcagga tggcgtgcag catcgctttt tgaacgccct gcgctgggag 1621 cgcgccacgc tctttttgcg accgcaatcc tatcacgagg acattgttcg cctgcgattg 1681 ctgccgcaat tctgtgagct gcatcccgat gccaccttct ccaagacggc catgtacgag 1741 gtgatactct cggtggccct ggaacaccag tgcattgcct tgctgaacga ttgtgcgagg 1801 agctggctgg atggcagctt tatgtgcaac atgatcgatc ccacggagct ctcgctttcg 1861 acgttgacca actggattgt gaggcgcgcg gggcagatta agcggcgctg ctcggaactc 1921 tgccaaggga tcttcgacta cggcggctat tcgctggacg agcgggagcg tcgcgagttc 1981 caggtgctct ccggccagct gcgcgagctg gtgcgcctgc aatcctacat agtggagctg 2041 ggacgaagaa ggcttgctcc ttccatgcta actgagtgcc aggcgaacga acgagcgctg 2101 cagacggtgc atcagtacca aagggtgctc tattggttta tagagcatgg tcttttgccg 2161 gagggtcagc aggagcatca ccaggagaag cctttagtgc tcctccgtca catttacgcc 2221 gagcgaaggg cgctgggcag gaagctctac atcgatcggc tggctgaaat ggcctcgctt 2281 tccggagagg cctcttatcc gccggaatcg ctgcattctc tgctgcacgt gatgctcgat 2341 ccgcagacgg aagtgggaaa caaacaggcg ctcatcctgt acctgctgat ggatctggat 2401 gcaaggctat tccggcgatt tcagacggct ttccaagtga aagaggagct ggccaaggcg 2461 gtgcgttcgt tttggtgcct ggacagcggg gattacgagc aatgcgttgt tgagctgtac 2521 aaggatccct ttcccgccag caaatttgag ccctggcaga tgcgtctgct gctggaaaca 2581 ctgctaaatg gaggcgccat caaggcggcc atgcgtgtgg ttagccagcc acctggtcct 2641 ttatcctccg agctgcacat gaacgtgctc ctggctaatg gcagcatgcc ggaggccttt 2701 ctaatggccc gtttatacga cgacgaccag ggtcagccgc tgctggagcg cttcttccgc 2761 cactgcattg cccgcggacg cttcaaggtg ctcgccgagc tttgcctgag cgaagaggag 2821 gagaggatgc tctacaggat gctgcgacag agtcgctcgc ggcaaacgga ctgcgtgcag 2881 ttgatcctgc tgctgcagaa gagcaagttc atcgaggctg tgtcctttat ggatgaggtg 2941 gctgaggaga gggaacgcga ggatgactcc tccagcagca cgattatctc cgcctatcga 3001 tcgaccatgg cgccagtggc ccagaatatt gcgggaacct atctgcgcat acgcgacacc 3061 ctcgaaatgg aggagggccg taatccgctg cagcccttca gctgccagtt ggtcaagcag 3121 aatgccagcg gccaggtggg cggcatcttc cagagctcgg cggtcagcgc ccattgggcc 3181 acgcatttcg aggaggcgtc gcttcctgcg ttgccaccga aactgggctg ctacagcaac 3241 attcccttcc tgcggcatgc gcaatatgga ctcgctgagc tgcctcatcg gcgaaggaag 3301 gtgcgtcctg tgccccatca ggcggtggag aagcggcagc gcgaggagga ggagcagcga 3361 cgcgaggagc gggaacgcag gcagcaatat acgttgcaac cacgcaagag gcggcgtttg 3421 ctggctgagc agctggtgga ggaggtcaag ggccatgtgc agtcgctgcg ggaggaggtt 3481 aaggagctgg aggagttgga taaccaagcc agcgatctgc tgcagccgcc gactttcctg 3541 cagacgcagc gaacaagaga gaggagcagc tcgccacagg caatactcac catactcaag 3601 cgtaaatcga ctttggaggg agctccgccg gtggccacat ccactactct gggcggaact 3661 aagagattcc gctttatgcc gccgattccg ctgcgtttag atggctccat ggaggtggac 3721 aggagcagga gcagcgagga ggaggagatc caggaggagg aggaggagga aaccgacgag 3781 attatcgtgg agatcgaatc aagaagcgag gagccgggaa acgttgattc gtcggaggag 3841 gaagaggagt tcctttcccc cttggcctct gccaatgtct cgctggtgga gcagcgtcct 3901 ccaactggcc cccagccacg tggctcgctg ctccagggaa gaacgggcga aagtagaaat 3961 ggcagcgaaa gcagcagcgg attcggcagc tttgccaccg cagtggctcc aagtcagacc 4021 acatcccact cgcatttcgt gcccaccgtc tgctcctcca aaatgggcga gtcaacgcaa 4081 atcttctcca gcggcagccg cgtggttagg atatccgaac gcaccaccat ctgcggtgaa 4141 atggagtcaa cggatttggg ttcagcggag gtaacaggcg cacgcagttc gcagtggtca 4201 gcagcagaga ttcctgctat ccaaagtggc caccggatga tggacaccac gctgggcatg 4261 tccacctacg aggtggcttc gctggagcag cagcagccgg agaatcagga ggaggaggag 4321 gaacttaagc tggaggatgc aacgcaacaa gagaatctgc agcaggagga gcagcaatac 4381 caggagcccc tctcctcgcc cacttatagt ttaagtagcg aggagtccga cctctcctcc 4441 tcggctggcc taaggaatcc cctggtgccg ccgcctctcc acaccgatga tcccatgtac 4501 tccattgtcg tggagtcgac gggctccatt accacctcgc gttcggttac gcatacgccc 4561 acctccttcc tgcccagcga cacgaatgtt tcgcagacct cgagtcccag ggaggcggga 4621 aatgaaggag atgatggcaa agacggcggc tcacccatct cattatatcg cgccaatagt 4681 ttggagacgg tcgacgatct ggacacgacg aagggctcgc tggaggagga ggaggagtac 4741 gacgaggacg acgactgcgt catcgcactc gatggcaccg aggtgcgcgg ctatgtggcg 4801 cgtccccagc aaacagtggc ctgtagcagt gccgagttgt ttgccttcaa ggagcaggaa 4861 gagggagtgg ctagtggtgt gccatgtccc tcgctttcca tgggcgccac tgtgaacagc 4921 gattccgagg tggccgatac tattgtgctg gacagcgatg aggaggagga gaagaaggag 4981 gagcagcaga agcaacagga agtgttgctg atggaagagg aggcaggcag caatgattcg 5041 gtggccacgg tggctttcag cgagaccaag caggatatgg agatagatgt ggcggtggag 5101 gaaaagcagc tggaggagat tcccgaagag gaggaggaac cagagagact ggcaatccag 5161 gaagaggatt ccaggcagag tctaacgctg atattatccg atgatgagga ggagcagccc 5221 gtggaagtta ctccggctga ggaggaggat caagtagaag tagctgcttc taagaaggag 5281 gagcaaatgg aagtagctgc ttctaaggag gaggatcaag tagaagcagc tgcctctaag 5341 gatgaagagc aaacagaagc agctgcctct aaggatgaag atcaagtagc agccactcca 5401 gctaaggagg aggatcaagt agaagtagct gcttctgggg aggaggaacc ggcaccacta 5461 cgttccctgc gcccgcgacg cggctcctcg gagcatcgcg acagtccgcg gcccctgcga 5521 tcgcgtcgct cctccatgga gcaccaggac agcccggctc ccttggccgc cggccgaagg 5581 atgcggctgc gtagcaatga tgccgtatct tcgcccgctg tctcctcgcc cgccgtcgcc 5641 acgcccaagc gccgcacgat gcagcacaag catctgctgg aggtgatcga cgagcagggc 5701 tccttggacg cttcgctgcc gcgcacccgt tcgcgttcgc ggctcagcgt ggactcggag 5761 gccacgccca cacaaagggc gcgcgacaag cgggccacct cgctggcacc cgccaccgag 5821 agtccgagtg tccggcgatc cgtgcgaggc aacagtgaac cgcccgctgc tgcagtacag 5881 cccctgcgca aacaaaggaa gacgcgcaga acgagtgcga cttcggagca atcgccaagt 5941 gtttcgaagg aggaggttcc tttagtggtt aaagaggagg aggaggcgga gcagcagcac 6001 gaggaggagg agcggccccg gctgcgtcgc accgccagac gacgcatctc cgatctgagc 6061 gatcagtcct ctaaaggcgc tgcaacagag gcccctgccg ccagcagcac caggaatcgg 6121 gaactgcgtc cgcgcactcg tcgctcctcc aagtcggagg tttagtcctt gtttccctca 6181 ttgtgcgaaa tggaaccaag aagcagcgaa caccgtcaac caatccctgt aaacaccgaa 6241 ttcacttcat attttgttca tgtttaatac caattttagt tggcataagt ttaaaatttt 6301 gcatatatcc gtttgagtta aaataaaaag ttaaaaaaaa aaattata